RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 CCDC174Q6PII3 467 aa19.57■□□□□ 0.72
SSH1-208ENST00000548522 CCDC129Q6ZRS4 1044 aa19.57■□□□□ 0.72
SSH1-208ENST00000548522 NOL8Q76FK4 1167 aaKnown RBP19.57■□□□□ 0.72
SSH1-208ENST00000548522 TLK2Q86UE8 772 aa19.57■□□□□ 0.72
SSH1-208ENST00000548522 FBXO16Q8IX29 292 aaPredicted RBP19.57■□□□□ 0.72
SSH1-208ENST00000548522 GMCL1Q96IK5 515 aa19.57■□□□□ 0.72
SSH1-208ENST00000548522 NAPBQ9H115 298 aa19.57■□□□□ 0.72
SSH1-208ENST00000548522 PRDM12Q9H4Q4 367 aa19.57■□□□□ 0.72
SSH1-208ENST00000548522 PDGFCQ9NRA1 345 aa19.57■□□□□ 0.72
SSH1-208ENST00000548522 GNEQ9Y223 722 aaKnown RBP19.57■□□□□ 0.72
SSH1-208ENST00000548522 ALAS1P13196 640 aa19.56■□□□□ 0.72
SSH1-208ENST00000548522 SMPD1P17405 629 aa19.56■□□□□ 0.72
SSH1-208ENST00000548522 SLC1A4P43007 532 aa19.56■□□□□ 0.72
SSH1-208ENST00000548522 NKX3-2P78367 333 aa19.56■□□□□ 0.72
SSH1-208ENST00000548522 PDE4BQ07343 736 aa19.56■□□□□ 0.72
SSH1-208ENST00000548522 EEPD1Q7L9B9 569 aa19.56■□□□□ 0.72
SSH1-208ENST00000548522 TMEM199Q8N511 208 aa19.56■□□□□ 0.72
SSH1-208ENST00000548522 PPM1EQ8WY54 764 aa19.56■□□□□ 0.72
SSH1-208ENST00000548522 TRERF1Q96PN7 1200 aa19.56■□□□□ 0.72
SSH1-208ENST00000548522 NACAP1Q9BZK3 213 aa19.56■□□□□ 0.72
SSH1-208ENST00000548522 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.56■□□□□ 0.72
SSH1-208ENST00000548522 CTDSPL2Q05D32 466 aa19.55■□□□□ 0.72
SSH1-208ENST00000548522 FSCN1Q16658 493 aaKnown RBP19.55■□□□□ 0.72
SSH1-208ENST00000548522 ZMYM1Q5SVZ6 1142 aa19.55■□□□□ 0.72
SSH1-208ENST00000548522 PSRC1Q6PGN9 363 aaPredicted RBP19.55■□□□□ 0.72
SSH1-208ENST00000548522 SLC43A3Q8NBI5 491 aa19.55■□□□□ 0.72
SSH1-208ENST00000548522 STAG1Q8WVM7 1258 aa19.55■□□□□ 0.72
SSH1-208ENST00000548522 FSD1Q9BTV5 496 aa19.55■□□□□ 0.72
SSH1-208ENST00000548522 IL17RBQ9NRM6 502 aa19.55■□□□□ 0.72
SSH1-208ENST00000548522 STX8Q9UNK0 236 aa19.55■□□□□ 0.72
SSH1-208ENST00000548522 MTMR7Q9Y216 660 aa19.55■□□□□ 0.72
SSH1-208ENST00000548522 REV3LO60673 3130 aa19.55■□□□□ 0.72
SSH1-208ENST00000548522 TLR3O15455 904 aaKnown RBP19.54■□□□□ 0.72
SSH1-208ENST00000548522 PSMC6P62333 389 aa19.54■□□□□ 0.72
SSH1-208ENST00000548522 ADGRE1Q14246 886 aa19.54■□□□□ 0.72
SSH1-208ENST00000548522 FAM160B2Q86V87 743 aa19.54■□□□□ 0.72
SSH1-208ENST00000548522 TRPV6Q9H1D0 765 aa19.54■□□□□ 0.72
SSH1-208ENST00000548522 HIPK3Q9H422 1215 aa19.54■□□□□ 0.72
SSH1-208ENST00000548522 IL23AQ9NPF7 189 aa19.54■□□□□ 0.72
SSH1-208ENST00000548522 PRR12Q9ULL5 1215 aa19.54■□□□□ 0.72
SSH1-208ENST00000548522 DYNC1LI2O43237 492 aaPredicted RBP19.53■□□□□ 0.72
SSH1-208ENST00000548522 FDX1P10109 184 aa19.53■□□□□ 0.72
SSH1-208ENST00000548522 CCL23P55773 120 aa19.53■□□□□ 0.72
SSH1-208ENST00000548522 TJAP1Q5JTD0 557 aa19.53■□□□□ 0.72
SSH1-208ENST00000548522 VPS53Q5VIR6 699 aa19.53■□□□□ 0.72
SSH1-208ENST00000548522 TAPT1Q6NXT6 567 aa19.53■□□□□ 0.72
SSH1-208ENST00000548522 CHURC1Q8WUH1 139 aa19.53■□□□□ 0.72
SSH1-208ENST00000548522 WNT8AQ9H1J5 351 aa19.53■□□□□ 0.72
SSH1-208ENST00000548522 CYP39A1Q9NYL5 469 aa19.53■□□□□ 0.72
SSH1-208ENST00000548522 YBX2Q9Y2T7 364 aaKnown RBP19.53■□□□□ 0.72
SSH1-208ENST00000548522 LCTP09848 1927 aa19.53■□□□□ 0.72
SSH1-208ENST00000548522 TTC41PQ6P2S7 1318 aa19.52■□□□□ 0.72
SSH1-208ENST00000548522 ASB14A6NK59 587 aa19.52■□□□□ 0.72
SSH1-208ENST00000548522 B4GALT4O60513 344 aa19.52■□□□□ 0.72
SSH1-208ENST00000548522 SLC3A2P08195 630 aaKnown RBP19.52■□□□□ 0.72
SSH1-208ENST00000548522 ITGA7Q13683 1181 aa19.52■□□□□ 0.72
SSH1-208ENST00000548522 OTOP2Q7RTS6 562 aa19.52■□□□□ 0.72
SSH1-208ENST00000548522 HERVK_113Q902F9 699 aa19.52■□□□□ 0.72
SSH1-208ENST00000548522 VWCEQ96DN2 955 aa19.52■□□□□ 0.72
SSH1-208ENST00000548522 NOC4LQ9BVI4 516 aaKnown RBP19.52■□□□□ 0.72
SSH1-208ENST00000548522 NKX2-4Q9H2Z4 354 aa19.52■□□□□ 0.72
SSH1-208ENST00000548522 PCDHB15Q9Y5E8 787 aa19.52■□□□□ 0.72
SSH1-208ENST00000548522 TSPY2A6NKD2 308 aa19.51■□□□□ 0.71
SSH1-208ENST00000548522 TKFCQ3LXA3 575 aa19.51■□□□□ 0.71
SSH1-208ENST00000548522 TTBK2Q6IQ55 1244 aa19.51■□□□□ 0.71
SSH1-208ENST00000548522 NSMFQ6X4W1 530 aa19.51■□□□□ 0.71
SSH1-208ENST00000548522 SYMPKQ92797 1274 aaKnown RBP19.51■□□□□ 0.71
SSH1-208ENST00000548522 GAS2L1Q99501 681 aaPredicted RBP19.51■□□□□ 0.71
SSH1-208ENST00000548522 AP5M1Q9H0R1 490 aa19.51■□□□□ 0.71
SSH1-208ENST00000548522 CCPG1Q9ULG6 757 aa19.51■□□□□ 0.71
SSH1-208ENST00000548522 PLA2G6O60733 806 aa19.5■□□□□ 0.71
SSH1-208ENST00000548522 SLC16A2P36021 539 aa19.5■□□□□ 0.71
SSH1-208ENST00000548522 RABGGTBP53611 331 aa19.5■□□□□ 0.71
SSH1-208ENST00000548522 CCDC85BQ15834 202 aaPredicted RBP19.5■□□□□ 0.71
SSH1-208ENST00000548522 CCDC96Q2M329 555 aa19.5■□□□□ 0.71
SSH1-208ENST00000548522 LRRFIP1Q32MZ4 808 aaKnown RBP19.5■□□□□ 0.71
SSH1-208ENST00000548522 RCSD1Q6JBY9 416 aa19.5■□□□□ 0.71
SSH1-208ENST00000548522 NFIBO00712 420 aa19.49■□□□□ 0.71
SSH1-208ENST00000548522 ERC2O15083 957 aa19.49■□□□□ 0.71
SSH1-208ENST00000548522 CABYRO75952 493 aa19.49■□□□□ 0.71
SSH1-208ENST00000548522 MYOGP15173 224 aa19.49■□□□□ 0.71
SSH1-208ENST00000548522 PPP1R13LQ8WUF5 828 aa19.49■□□□□ 0.71
SSH1-208ENST00000548522 SCLYQ96I15 445 aa19.49■□□□□ 0.71
SSH1-208ENST00000548522 SALL3Q9BXA9 1300 aa19.49■□□□□ 0.71
SSH1-208ENST00000548522 RANBP6O60518 1105 aaKnown RBP19.48■□□□□ 0.71
SSH1-208ENST00000548522 FGBP02675 491 aa19.48■□□□□ 0.71
SSH1-208ENST00000548522 ICAM1P05362 532 aa19.48■□□□□ 0.71
SSH1-208ENST00000548522 MX1P20591 662 aa19.48■□□□□ 0.71
SSH1-208ENST00000548522 RAB30Q15771 203 aa19.48■□□□□ 0.71
SSH1-208ENST00000548522 RANBP17Q9H2T7 1088 aaKnown RBP19.48■□□□□ 0.71
SSH1-208ENST00000548522 TRMT13Q9NUP7 481 aaKnown RBP19.48■□□□□ 0.71
SSH1-208ENST00000548522 MSRAQ9UJ68 235 aa19.48■□□□□ 0.71
SSH1-208ENST00000548522 FRMPD2Q68DX3 1309 aaPredicted RBP19.48■□□□□ 0.71
SSH1-208ENST00000548522 IGFBP4P22692 258 aa19.47■□□□□ 0.71
SSH1-208ENST00000548522 NOVP48745 357 aa19.47■□□□□ 0.71
SSH1-208ENST00000548522 BAATQ14032 418 aaPredicted RBP19.47■□□□□ 0.71
SSH1-208ENST00000548522 AKNAD1Q5T1N1 836 aa19.47■□□□□ 0.71
SSH1-208ENST00000548522 IQSEC1Q6DN90 963 aa19.47■□□□□ 0.71
SSH1-208ENST00000548522 SLC30A10Q6XR72 485 aa19.47■□□□□ 0.71
SSH1-208ENST00000548522 KIAA1211Q6ZU35 1233 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms