RNA–Protein interactions for RNA: ENST00000548470.1

TUBA1C-203, Transcript of tubulin alpha 1c, humanhuman

TSL 2

Gene TUBA1C, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-203ENST00000548470 GOLGA8AA7E2F4 631 aa13.6□□□□□ -0.23
TUBA1C-203ENST00000548470 MSCO60682 206 aa13.6□□□□□ -0.23
TUBA1C-203ENST00000548470 PRKAR2AP13861 404 aaKnown RBP13.6□□□□□ -0.23
TUBA1C-203ENST00000548470 EN2P19622 333 aaPredicted RBP13.6□□□□□ -0.23
TUBA1C-203ENST00000548470 LIFRP42702 1097 aa13.6□□□□□ -0.23
TUBA1C-203ENST00000548470 MCM2P49736 904 aa13.6□□□□□ -0.23
TUBA1C-203ENST00000548470 CACNB2Q08289 660 aaPredicted RBP13.6□□□□□ -0.23
TUBA1C-203ENST00000548470 SCRN1Q12765 414 aa13.6□□□□□ -0.23
TUBA1C-203ENST00000548470 ZNF792Q3KQV3 632 aa13.6□□□□□ -0.23
TUBA1C-203ENST00000548470 TTBK2Q6IQ55 1244 aa13.6□□□□□ -0.23
TUBA1C-203ENST00000548470 CATIPQ7Z7H3 387 aa13.6□□□□□ -0.23
TUBA1C-203ENST00000548470 ANKRD35Q8N283 1001 aa13.6□□□□□ -0.23
TUBA1C-203ENST00000548470 FBXL16Q8N461 479 aa13.6□□□□□ -0.23
TUBA1C-203ENST00000548470 ANKLE1Q8NAG6 615 aa13.6□□□□□ -0.23
TUBA1C-203ENST00000548470 NPLOC4Q8TAT6 608 aa13.6□□□□□ -0.23
TUBA1C-203ENST00000548470 U2AF1L4Q8WU68 220 aaKnown RBP13.6□□□□□ -0.23
TUBA1C-203ENST00000548470 NUP133Q8WUM0 1156 aa13.6□□□□□ -0.23
TUBA1C-203ENST00000548470 CRISPLD2Q9H0B8 497 aa13.6□□□□□ -0.23
TUBA1C-203ENST00000548470 ACAD9Q9H845 621 aa13.6□□□□□ -0.23
TUBA1C-203ENST00000548470 SLC12A7Q9Y666 1083 aa13.6□□□□□ -0.23
TUBA1C-203ENST00000548470 PFASO15067 1338 aa13.6□□□□□ -0.23
TUBA1C-203ENST00000548470 ZNF536O15090 1300 aa13.6□□□□□ -0.23
TUBA1C-203ENST00000548470 A0A0G2JMZ2 1700 aa13.59□□□□□ -0.23
TUBA1C-203ENST00000548470 DNAJC25-GNG10A0A024R161 153 aa13.59□□□□□ -0.23
TUBA1C-203ENST00000548470 ZBTB43O43298 467 aa13.59□□□□□ -0.23
TUBA1C-203ENST00000548470 PFKFB2O60825 505 aa13.59□□□□□ -0.23
TUBA1C-203ENST00000548470 MYCP01106 439 aaPredicted RBP13.59□□□□□ -0.23
TUBA1C-203ENST00000548470 TFRCP02786 760 aaKnown RBP13.59□□□□□ -0.23
TUBA1C-203ENST00000548470 CDC27P30260 824 aa13.59□□□□□ -0.23
TUBA1C-203ENST00000548470 SLC16A2P36021 539 aa13.59□□□□□ -0.23
TUBA1C-203ENST00000548470 EVCP57679 992 aa13.59□□□□□ -0.23
TUBA1C-203ENST00000548470 CCL14Q16627 93 aa13.59□□□□□ -0.23
TUBA1C-203ENST00000548470 RGS22Q8NE09 1264 aa13.59□□□□□ -0.23
TUBA1C-203ENST00000548470 GTF3C6Q969F1 213 aa13.59□□□□□ -0.23
TUBA1C-203ENST00000548470 MAML3Q96JK9 1138 aa13.59□□□□□ -0.23
TUBA1C-203ENST00000548470 AGBL1Q96MI9 1066 aa13.59□□□□□ -0.23
TUBA1C-203ENST00000548470 TRERF1Q96PN7 1200 aa13.59□□□□□ -0.23
TUBA1C-203ENST00000548470 SLKQ9H2G2 1235 aaPredicted RBP13.59□□□□□ -0.23
TUBA1C-203ENST00000548470 CCPG1Q9ULG6 757 aa13.59□□□□□ -0.23
TUBA1C-203ENST00000548470 FRMPD2Q68DX3 1309 aaPredicted RBP13.59□□□□□ -0.23
TUBA1C-203ENST00000548470 MGAMO43451 1857 aa13.59□□□□□ -0.23
TUBA1C-203ENST00000548470 LOC102724159A0A0B4J2E5 919 aa13.58□□□□□ -0.24
TUBA1C-203ENST00000548470 PALM3A6NDB9 673 aaPredicted RBP13.58□□□□□ -0.24
TUBA1C-203ENST00000548470 JAK2O60674 1132 aa13.58□□□□□ -0.24
TUBA1C-203ENST00000548470 CALM1P0DP23 149 aa13.58□□□□□ -0.24
TUBA1C-203ENST00000548470 CALM2P0DP24 149 aa13.58□□□□□ -0.24
TUBA1C-203ENST00000548470 CALM3P0DP25 149 aa13.58□□□□□ -0.24
TUBA1C-203ENST00000548470 ALAS1P13196 640 aa13.58□□□□□ -0.24
TUBA1C-203ENST00000548470 SMARCA1P28370 1054 aa13.58□□□□□ -0.24
TUBA1C-203ENST00000548470 METAP2P50579 478 aaKnown RBP eCLIP13.58□□□□□ -0.241e-7■■□□□ 11.9
TUBA1C-203ENST00000548470 CUL4AQ13619 759 aa13.58□□□□□ -0.24
TUBA1C-203ENST00000548470 PWP2Q15269 919 aaKnown RBP13.58□□□□□ -0.24
TUBA1C-203ENST00000548470 CCDC174Q6PII3 467 aa13.58□□□□□ -0.24
TUBA1C-203ENST00000548470 MAMDC4Q6UXC1 1216 aa13.58□□□□□ -0.24
TUBA1C-203ENST00000548470 CMTR1Q8N1G2 835 aaKnown RBP13.58□□□□□ -0.24
TUBA1C-203ENST00000548470 ZNF274Q96GC6 653 aaPredicted RBP13.58□□□□□ -0.24
TUBA1C-203ENST00000548470 ZSCAN31Q96LW9 406 aaPredicted RBP13.58□□□□□ -0.24
TUBA1C-203ENST00000548470 DEFB118Q96PH6 123 aa13.58□□□□□ -0.24
TUBA1C-203ENST00000548470 TINF2Q9BSI4 451 aa13.58□□□□□ -0.24
TUBA1C-203ENST00000548470 SH2B1Q9NRF2 756 aaPredicted RBP13.58□□□□□ -0.24
TUBA1C-203ENST00000548470 RNF146Q9NTX7 359 aa13.58□□□□□ -0.24
TUBA1C-203ENST00000548470 FAM217BQ9NTX9 383 aaPredicted RBP13.58□□□□□ -0.24
TUBA1C-203ENST00000548470 RLFQ13129 1914 aa13.58□□□□□ -0.24
TUBA1C-203ENST00000548470 KLRF2D3W0D1 207 aa13.57□□□□□ -0.24
TUBA1C-203ENST00000548470 PLEKHA8P1O95397 391 aa13.57□□□□□ -0.24
TUBA1C-203ENST00000548470 CTDNEP1O95476 244 aa13.57□□□□□ -0.24
TUBA1C-203ENST00000548470 KIF5BP33176 963 aa13.57□□□□□ -0.24
TUBA1C-203ENST00000548470 ADD1P35611 737 aaKnown RBP13.57□□□□□ -0.24
TUBA1C-203ENST00000548470 GNAQP50148 359 aa13.57□□□□□ -0.24
TUBA1C-203ENST00000548470 TROAPQ12815 778 aa13.57□□□□□ -0.24
TUBA1C-203ENST00000548470 TRIM32Q13049 653 aa13.57□□□□□ -0.24
TUBA1C-203ENST00000548470 RTN1Q16799 776 aa13.57□□□□□ -0.24
TUBA1C-203ENST00000548470 ADGRF4Q8IZF3 695 aa13.57□□□□□ -0.24
TUBA1C-203ENST00000548470 SAMD3Q8N6K7 520 aa13.57□□□□□ -0.24
TUBA1C-203ENST00000548470 LZTS2Q9BRK4 669 aa13.57□□□□□ -0.24
TUBA1C-203ENST00000548470 CPVLQ9H3G5 476 aa13.57□□□□□ -0.24
TUBA1C-203ENST00000548470 FLRT1Q9NZU1 646 aa13.57□□□□□ -0.24
TUBA1C-203ENST00000548470 SYNGAP1Q96PV0 1343 aa13.57□□□□□ -0.24
TUBA1C-203ENST00000548470 ZSWIM8A7E2V4 1837 aa13.57□□□□□ -0.24
TUBA1C-203ENST00000548470 NID2Q14112 1375 aa13.57□□□□□ -0.24
TUBA1C-203ENST00000548470 POTEB2H3BUK9 544 aa13.56□□□□□ -0.24
TUBA1C-203ENST00000548470 DDAH1O94760 285 aa13.56□□□□□ -0.24
TUBA1C-203ENST00000548470 PGK2P07205 417 aa13.56□□□□□ -0.24
TUBA1C-203ENST00000548470 GOLGA8HP0CJ92 632 aa13.56□□□□□ -0.24
TUBA1C-203ENST00000548470 CYP2C19P33261 490 aa13.56□□□□□ -0.24
TUBA1C-203ENST00000548470 FOSBP53539 338 aa13.56□□□□□ -0.24
TUBA1C-203ENST00000548470 GRM4Q14833 912 aa13.56□□□□□ -0.24
TUBA1C-203ENST00000548470 SLC35G1Q2M3R5 365 aa13.56□□□□□ -0.24
TUBA1C-203ENST00000548470 SYNE3Q6ZMZ3 975 aa13.56□□□□□ -0.24
TUBA1C-203ENST00000548470 STAG2Q8N3U4 1231 aa13.56□□□□□ -0.24
TUBA1C-203ENST00000548470 UBA5Q9GZZ9 404 aa13.56□□□□□ -0.24
TUBA1C-203ENST00000548470 DAXXQ9UER7 740 aaPredicted RBP13.56□□□□□ -0.24
TUBA1C-203ENST00000548470 OGDHLQ9ULD0 1010 aa13.56□□□□□ -0.24
TUBA1C-203ENST00000548470 ZNF236Q9UL36 1845 aa13.55□□□□□ -0.24
TUBA1C-203ENST00000548470 ASB14A6NK59 587 aa13.55□□□□□ -0.24
TUBA1C-203ENST00000548470 B4DLN1 442 aa13.55□□□□□ -0.24
TUBA1C-203ENST00000548470 SEPT4O43236 478 aa13.55□□□□□ -0.24
TUBA1C-203ENST00000548470 HSP90AA1P07900 732 aaKnown RBP13.55□□□□□ -0.24
TUBA1C-203ENST00000548470 CYBAP13498 195 aa13.55□□□□□ -0.24
TUBA1C-203ENST00000548470 MRPL12P52815 198 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms