RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 BEX3Q00994 111 aa23.8■■□□□ 1.4
GATC-202ENST00000548171 FSCN1Q16658 493 aaKnown RBP23.8■■□□□ 1.4
GATC-202ENST00000548171 CXCL17Q6UXB2 119 aa23.8■■□□□ 1.4
GATC-202ENST00000548171 TLK2Q86UE8 772 aa23.8■■□□□ 1.4
GATC-202ENST00000548171 ATXN2LQ8WWM7 1075 aaKnown RBP23.8■■□□□ 1.4
GATC-202ENST00000548171 AP5M1Q9H0R1 490 aa23.8■■□□□ 1.4
GATC-202ENST00000548171 HIPK3Q9H422 1215 aa23.8■■□□□ 1.4
GATC-202ENST00000548171 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.79■■□□□ 1.4
GATC-202ENST00000548171 SOWAHBA6NEL2 793 aa23.79■■□□□ 1.4
GATC-202ENST00000548171 TNFRSF10AO00220 468 aa23.79■■□□□ 1.4
GATC-202ENST00000548171 TFAP4Q01664 338 aa23.79■■□□□ 1.4
GATC-202ENST00000548171 IKQ13123 557 aaPredicted RBP23.79■■□□□ 1.4
GATC-202ENST00000548171 AGBL1Q96MI9 1066 aa23.79■■□□□ 1.4
GATC-202ENST00000548171 TRERF1Q96PN7 1200 aa23.79■■□□□ 1.4
GATC-202ENST00000548171 PRDM12Q9H4Q4 367 aa23.79■■□□□ 1.4
GATC-202ENST00000548171 Q9Y3F1 56 aa23.79■■□□□ 1.4
GATC-202ENST00000548171 ASTN1O14525 1302 aa23.79■■□□□ 1.4
GATC-202ENST00000548171 LCTP09848 1927 aa23.78■■□□□ 1.4
GATC-202ENST00000548171 FGBP02675 491 aa23.78■■□□□ 1.4
GATC-202ENST00000548171 ITGA7Q13683 1181 aa23.78■■□□□ 1.4
GATC-202ENST00000548171 NAPBQ9H115 298 aa23.78■■□□□ 1.4
GATC-202ENST00000548171 PPARAQ07869 468 aa23.77■■□□□ 1.4
GATC-202ENST00000548171 TSHZ3Q63HK5 1081 aa23.77■■□□□ 1.4
GATC-202ENST00000548171 IQSEC1Q6DN90 963 aa23.77■■□□□ 1.4
GATC-202ENST00000548171 SLC28A3Q9HAS3 691 aa23.77■■□□□ 1.4
GATC-202ENST00000548171 THEGQ9P2T0 379 aa23.77■■□□□ 1.4
GATC-202ENST00000548171 TTC41PQ6P2S7 1318 aa23.77■■□□□ 1.4
GATC-202ENST00000548171 ALAS1P13196 640 aa23.76■■□□□ 1.39
GATC-202ENST00000548171 SMPD1P17405 629 aa23.76■■□□□ 1.39
GATC-202ENST00000548171 MCCP23508 829 aa23.76■■□□□ 1.39
GATC-202ENST00000548171 RCSD1Q6JBY9 416 aa23.76■■□□□ 1.39
GATC-202ENST00000548171 CXXC1Q9P0U4 656 aaPredicted RBP23.76■■□□□ 1.39
GATC-202ENST00000548171 ERC2O15083 957 aa23.75■■□□□ 1.39
GATC-202ENST00000548171 DYNC1LI2O43237 492 aaPredicted RBP23.75■■□□□ 1.39
GATC-202ENST00000548171 C20orf194Q5TEA3 1177 aa23.75■■□□□ 1.39
GATC-202ENST00000548171 PPM1EQ8WY54 764 aa23.75■■□□□ 1.39
GATC-202ENST00000548171 NOC4LQ9BVI4 516 aaKnown RBP23.75■■□□□ 1.39
GATC-202ENST00000548171 VTA1Q9NP79 307 aa23.75■■□□□ 1.39
GATC-202ENST00000548171 CYP39A1Q9NYL5 469 aa23.75■■□□□ 1.39
GATC-202ENST00000548171 STX8Q9UNK0 236 aa23.75■■□□□ 1.39
GATC-202ENST00000548171 RPUSD2Q8IZ73 545 aaKnown RBP23.74■■□□□ 1.39
GATC-202ENST00000548171 ASB2Q96Q27 587 aa23.74■■□□□ 1.39
GATC-202ENST00000548171 SEC62Q99442 399 aaKnown RBP23.74■■□□□ 1.39
GATC-202ENST00000548171 PRR12Q9ULL5 1215 aa23.74■■□□□ 1.39
GATC-202ENST00000548171 GRIN2DO15399 1336 aa23.74■■□□□ 1.39
GATC-202ENST00000548171 DIEXFQ68CQ4 756 aaKnown RBP23.73■■□□□ 1.39
GATC-202ENST00000548171 TAPT1Q6NXT6 567 aa23.73■■□□□ 1.39
GATC-202ENST00000548171 FSD1Q9BTV5 496 aa23.73■■□□□ 1.39
GATC-202ENST00000548171 TRPV6Q9H1D0 765 aa23.73■■□□□ 1.39
GATC-202ENST00000548171 NKX2-4Q9H2Z4 354 aa23.73■■□□□ 1.39
GATC-202ENST00000548171 UMODL1Q5DID0 1318 aa23.73■■□□□ 1.39
GATC-202ENST00000548171 CHD9Q3L8U1 2897 aa23.73■■□□□ 1.39
GATC-202ENST00000548171 TSPY2A6NKD2 308 aa23.72■■□□□ 1.39
GATC-202ENST00000548171 B4GALT4O60513 344 aa23.72■■□□□ 1.39
GATC-202ENST00000548171 IGFBP4P22692 258 aa23.72■■□□□ 1.39
GATC-202ENST00000548171 MRPS5P82675 430 aaKnown RBP23.72■■□□□ 1.39
GATC-202ENST00000548171 ADGRE1Q14246 886 aa23.72■■□□□ 1.39
GATC-202ENST00000548171 ZMYM1Q5SVZ6 1142 aa23.72■■□□□ 1.39
GATC-202ENST00000548171 KCTD1Q719H9 257 aa23.72■■□□□ 1.39
GATC-202ENST00000548171 OTOP2Q7RTS6 562 aa23.72■■□□□ 1.39
GATC-202ENST00000548171 FBXO16Q8IX29 292 aaPredicted RBP23.72■■□□□ 1.39
GATC-202ENST00000548171 MORC4Q8TE76 937 aa23.72■■□□□ 1.39
GATC-202ENST00000548171 PDGFCQ9NRA1 345 aa23.72■■□□□ 1.39
GATC-202ENST00000548171 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.72■■□□□ 1.39
GATC-202ENST00000548171 SLC4A7Q9Y6M7 1214 aa23.72■■□□□ 1.39
GATC-202ENST00000548171 LOC102724159A0A0B4J2E5 919 aa23.71■■□□□ 1.39
GATC-202ENST00000548171 ICAM1P05362 532 aa23.71■■□□□ 1.39
GATC-202ENST00000548171 CCL23P55773 120 aa23.71■■□□□ 1.39
GATC-202ENST00000548171 PWP2Q15269 919 aaKnown RBP23.71■■□□□ 1.39
GATC-202ENST00000548171 MUM1L1Q5H9M0 696 aa23.71■■□□□ 1.39
GATC-202ENST00000548171 EEPD1Q7L9B9 569 aa23.71■■□□□ 1.39
GATC-202ENST00000548171 WNT8AQ9H1J5 351 aa23.71■■□□□ 1.39
GATC-202ENST00000548171 IL17RBQ9NRM6 502 aa23.71■■□□□ 1.39
GATC-202ENST00000548171 ADD3Q9UEY8 706 aaKnown RBP23.71■■□□□ 1.39
GATC-202ENST00000548171 CCPG1Q9ULG6 757 aa23.71■■□□□ 1.39
GATC-202ENST00000548171 YBX2Q9Y2T7 364 aaKnown RBP23.71■■□□□ 1.39
GATC-202ENST00000548171 PFKMP08237 780 aa23.7■■□□□ 1.38
GATC-202ENST00000548171 SUPT20HL2P0C7V6 817 aa23.7■■□□□ 1.38
GATC-202ENST00000548171 DUSP28Q4G0W2 176 aa23.7■■□□□ 1.38
GATC-202ENST00000548171 NSMFQ6X4W1 530 aa23.7■■□□□ 1.38
GATC-202ENST00000548171 KIAA1211Q6ZU35 1233 aa23.7■■□□□ 1.38
GATC-202ENST00000548171 PI4K2BQ8TCG2 481 aa23.7■■□□□ 1.38
GATC-202ENST00000548171 CHMP4CQ96CF2 233 aa23.7■■□□□ 1.38
GATC-202ENST00000548171 ALDH8A1Q9H2A2 487 aaPredicted RBP23.7■■□□□ 1.38
GATC-202ENST00000548171 TSPYL2Q9H2G4 693 aaPredicted RBP23.7■■□□□ 1.38
GATC-202ENST00000548171 PCDHA11Q9Y5I1 949 aa23.7■■□□□ 1.38
GATC-202ENST00000548171 PSMC6P62333 389 aa23.69■■□□□ 1.38
GATC-202ENST00000548171 CCDC85BQ15834 202 aaPredicted RBP23.69■■□□□ 1.38
GATC-202ENST00000548171 IL27Q8NEV9 243 aa23.69■■□□□ 1.38
GATC-202ENST00000548171 ADAMTS19Q8TE59 1207 aa23.69■■□□□ 1.38
GATC-202ENST00000548171 DCAF4Q8WV16 495 aa23.69■■□□□ 1.38
GATC-202ENST00000548171 POLR3EQ9NVU0 708 aa23.69■■□□□ 1.38
GATC-202ENST00000548171 MUC3AQ02505 3323 aa23.69■■□□□ 1.38
GATC-202ENST00000548171 NOVP48745 357 aa23.68■■□□□ 1.38
GATC-202ENST00000548171 SNAP25P60880 206 aa23.68■■□□□ 1.38
GATC-202ENST00000548171 PPP2R2DQ66LE6 453 aa23.68■■□□□ 1.38
GATC-202ENST00000548171 RANBP17Q9H2T7 1088 aaKnown RBP23.68■■□□□ 1.38
GATC-202ENST00000548171 DDX49Q9Y6V7 483 aaKnown RBP23.68■■□□□ 1.38
GATC-202ENST00000548171 SCN10AQ9Y5Y9 1956 aa23.68■■□□□ 1.38
GATC-202ENST00000548171 SCN5AQ14524 2016 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms