RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 RAD21O60216 631 aa14.06□□□□□ -0.16
HDAC7-226ENST00000547259 ADCYAP1R1P41586 468 aa14.06□□□□□ -0.16
HDAC7-226ENST00000547259 LIFRP42702 1097 aa14.06□□□□□ -0.16
HDAC7-226ENST00000547259 NOVP48745 357 aa14.06□□□□□ -0.16
HDAC7-226ENST00000547259 SMAD3P84022 425 aaKnown RBP14.06□□□□□ -0.16
HDAC7-226ENST00000547259 TOB2Q14106 344 aaPredicted RBP14.06□□□□□ -0.16
HDAC7-226ENST00000547259 TMEM132BQ14DG7 1078 aa14.06□□□□□ -0.16
HDAC7-226ENST00000547259 ANKRD1Q15327 319 aa14.06□□□□□ -0.16
HDAC7-226ENST00000547259 SIAH1Q8IUQ4 282 aa14.06□□□□□ -0.16
HDAC7-226ENST00000547259 TMTC2Q8N394 836 aa14.06□□□□□ -0.16
HDAC7-226ENST00000547259 IL27Q8NEV9 243 aa14.06□□□□□ -0.16
HDAC7-226ENST00000547259 ANKS1AQ92625 1134 aa14.06□□□□□ -0.16
HDAC7-226ENST00000547259 TMEM47Q9BQJ4 181 aa14.06□□□□□ -0.16
HDAC7-226ENST00000547259 TINF2Q9BSI4 451 aa14.06□□□□□ -0.16
HDAC7-226ENST00000547259 ALDH8A1Q9H2A2 487 aaPredicted RBP14.06□□□□□ -0.16
HDAC7-226ENST00000547259 XPNPEP3Q9NQH7 507 aa14.06□□□□□ -0.16
HDAC7-226ENST00000547259 PRDM5Q9NQX1 630 aaPredicted RBP14.06□□□□□ -0.16
HDAC7-226ENST00000547259 PHF24Q9UPV7 400 aa14.06□□□□□ -0.16
HDAC7-226ENST00000547259 CNPY2Q9Y2B0 182 aa14.06□□□□□ -0.16
HDAC7-226ENST00000547259 KLF18A0A0U1RQI7 1052 aa14.05□□□□□ -0.16
HDAC7-226ENST00000547259 VWA5AO00534 786 aa14.05□□□□□ -0.16
HDAC7-226ENST00000547259 AKR1A1P14550 325 aa14.05□□□□□ -0.16
HDAC7-226ENST00000547259 APOBRQ0VD83 1088 aa14.05□□□□□ -0.16
HDAC7-226ENST00000547259 SAMD1Q6SPF0 538 aaPredicted RBP14.05□□□□□ -0.16
HDAC7-226ENST00000547259 SYNE3Q6ZMZ3 975 aa14.05□□□□□ -0.16
HDAC7-226ENST00000547259 CATIPQ7Z7H3 387 aa14.05□□□□□ -0.16
HDAC7-226ENST00000547259 SGMS1Q86VZ5 419 aa14.05□□□□□ -0.16
HDAC7-226ENST00000547259 ZNF654Q8IZM8 581 aa14.05□□□□□ -0.16
HDAC7-226ENST00000547259 FBXL16Q8N461 479 aa14.05□□□□□ -0.16
HDAC7-226ENST00000547259 PNMA1Q8ND90 353 aa14.05□□□□□ -0.16
HDAC7-226ENST00000547259 TSEN34Q9BSV6 310 aaKnown RBP14.05□□□□□ -0.16
HDAC7-226ENST00000547259 AGXT2Q9BYV1 514 aa14.05□□□□□ -0.16
HDAC7-226ENST00000547259 PPP1R9AQ9ULJ8 1098 aa14.05□□□□□ -0.16
HDAC7-226ENST00000547259 MTMR7Q9Y216 660 aa14.05□□□□□ -0.16
HDAC7-226ENST00000547259 CTDP1Q9Y5B0 961 aaPredicted RBP14.05□□□□□ -0.16
HDAC7-226ENST00000547259 LTBP2Q14767 1821 aa14.05□□□□□ -0.16
HDAC7-226ENST00000547259 TMEM265A0A087WTH1 108 aa14.04□□□□□ -0.16
HDAC7-226ENST00000547259 GOLGA8BA8MQT2 603 aa14.04□□□□□ -0.16
HDAC7-226ENST00000547259 TRIM60Q495X7 471 aa14.04□□□□□ -0.16
HDAC7-226ENST00000547259 KIAA1755Q5JYT7 1200 aa14.04□□□□□ -0.16
HDAC7-226ENST00000547259 PRAMEF19Q5SWL8 479 aa14.04□□□□□ -0.16
HDAC7-226ENST00000547259 ANO1Q5XXA6 986 aa14.04□□□□□ -0.16
HDAC7-226ENST00000547259 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.04□□□□□ -0.16
HDAC7-226ENST00000547259 NUP133Q8WUM0 1156 aa14.04□□□□□ -0.16
HDAC7-226ENST00000547259 MKL1Q969V6 931 aa14.04□□□□□ -0.16
HDAC7-226ENST00000547259 LARP6Q9BRS8 491 aaKnown RBP14.04□□□□□ -0.16
HDAC7-226ENST00000547259 TEX13BQ9BXU2 312 aa14.04□□□□□ -0.16
HDAC7-226ENST00000547259 SYNPO2Q9UMS6 1093 aa14.04□□□□□ -0.16
HDAC7-226ENST00000547259 SLC12A7Q9Y666 1083 aa14.04□□□□□ -0.16
HDAC7-226ENST00000547259 MYO9BQ13459 2157 aa14.03□□□□□ -0.16
HDAC7-226ENST00000547259 DDAH1O94760 285 aa14.03□□□□□ -0.16
HDAC7-226ENST00000547259 SHHQ15465 462 aa14.03□□□□□ -0.16
HDAC7-226ENST00000547259 ZNF792Q3KQV3 632 aa14.03□□□□□ -0.16
HDAC7-226ENST00000547259 APOA5Q6Q788 366 aa14.03□□□□□ -0.16
HDAC7-226ENST00000547259 MICU3Q86XE3 530 aa14.03□□□□□ -0.16
HDAC7-226ENST00000547259 RAB11FIP4Q86YS3 637 aa14.03□□□□□ -0.16
HDAC7-226ENST00000547259 PRPF38AQ8NAV1 312 aaKnown RBP14.03□□□□□ -0.16
HDAC7-226ENST00000547259 BADQ92934 168 aa14.03□□□□□ -0.16
HDAC7-226ENST00000547259 FERMT2Q96AC1 680 aa14.03□□□□□ -0.16
HDAC7-226ENST00000547259 CHMP4CQ96CF2 233 aa14.03□□□□□ -0.16
HDAC7-226ENST00000547259 DDX11Q96FC9 970 aa14.03□□□□□ -0.16
HDAC7-226ENST00000547259 SLF1Q9BQI6 1058 aa14.03□□□□□ -0.16
HDAC7-226ENST00000547259 MYL10Q9BUA6 226 aa14.03□□□□□ -0.16
HDAC7-226ENST00000547259 SPC25Q9HBM1 224 aa14.03□□□□□ -0.16
HDAC7-226ENST00000547259 PDLIM7Q9NR12 457 aa14.03□□□□□ -0.16
HDAC7-226ENST00000547259 TSHZ2Q9NRE2 1034 aa14.03□□□□□ -0.16
HDAC7-226ENST00000547259 BRPF3Q9ULD4 1205 aa14.03□□□□□ -0.16
HDAC7-226ENST00000547259 ISY1Q9ULR0 285 aaKnown RBP14.03□□□□□ -0.16
HDAC7-226ENST00000547259 MYH6P13533 1939 aa14.02□□□□□ -0.16
HDAC7-226ENST00000547259 MROH7Q68CQ1 1323 aa14.02□□□□□ -0.17
HDAC7-226ENST00000547259 SYNGAP1Q96PV0 1343 aa14.02□□□□□ -0.17
HDAC7-226ENST00000547259 MOXD2PA6NHM9 499 aa14.02□□□□□ -0.17
HDAC7-226ENST00000547259 DCDC2CA8MYV0 355 aa14.02□□□□□ -0.17
HDAC7-226ENST00000547259 ZBTB43O43298 467 aa14.02□□□□□ -0.17
HDAC7-226ENST00000547259 CD2BP2O95400 341 aaKnown RBP14.02□□□□□ -0.17
HDAC7-226ENST00000547259 CLTBP09497 229 aa14.02□□□□□ -0.17
HDAC7-226ENST00000547259 CALM1P0DP23 149 aa14.02□□□□□ -0.17
HDAC7-226ENST00000547259 CALM2P0DP24 149 aa14.02□□□□□ -0.17
HDAC7-226ENST00000547259 CALM3P0DP25 149 aa14.02□□□□□ -0.17
HDAC7-226ENST00000547259 FDX1P10109 184 aa14.02□□□□□ -0.17
HDAC7-226ENST00000547259 RAG1P15918 1043 aa14.02□□□□□ -0.17
HDAC7-226ENST00000547259 MCM2P49736 904 aa14.02□□□□□ -0.17
HDAC7-226ENST00000547259 TLE2Q04725 743 aa14.02□□□□□ -0.17
HDAC7-226ENST00000547259 CCDC96Q2M329 555 aa14.02□□□□□ -0.17
HDAC7-226ENST00000547259 SLFN13Q68D06 897 aa14.02□□□□□ -0.17
HDAC7-226ENST00000547259 CCDC174Q6PII3 467 aa14.02□□□□□ -0.17
HDAC7-226ENST00000547259 GMCL1P1Q8NEA9 526 aa14.02□□□□□ -0.17
HDAC7-226ENST00000547259 TOX2Q96NM4 488 aa14.02□□□□□ -0.17
HDAC7-226ENST00000547259 GUCD1Q96NT3 240 aa14.02□□□□□ -0.17
HDAC7-226ENST00000547259 FBXO40Q9UH90 709 aa14.02□□□□□ -0.17
HDAC7-226ENST00000547259 ZNF214Q9UL59 606 aaPredicted RBP14.02□□□□□ -0.17
HDAC7-226ENST00000547259 FAM184BQ9ULE4 1060 aa14.02□□□□□ -0.17
HDAC7-226ENST00000547259 TPCN1Q9ULQ1 816 aa14.02□□□□□ -0.17
HDAC7-226ENST00000547259 GOLGA8AA7E2F4 631 aa14.01□□□□□ -0.17
HDAC7-226ENST00000547259 F5H6K3 240 aa14.01□□□□□ -0.17
HDAC7-226ENST00000547259 ATP2A1O14983 1001 aa14.01□□□□□ -0.17
HDAC7-226ENST00000547259 KIAA0355O15063 1070 aa14.01□□□□□ -0.17
HDAC7-226ENST00000547259 ZBED4O75132 1171 aa14.01□□□□□ -0.17
HDAC7-226ENST00000547259 NDUFB10O96000 172 aa14.01□□□□□ -0.17
HDAC7-226ENST00000547259 RXRAP19793 462 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms