RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 PNMA6FA0A0J9YX94 578 aa19.5■□□□□ 0.71
CCDC38-203ENST00000546803 METAP2P50579 478 aaKnown RBP eCLIP19.5■□□□□ 0.71
CCDC38-203ENST00000546803 TOB2Q14106 344 aaPredicted RBP19.5■□□□□ 0.71
CCDC38-203ENST00000546803 MUM1L1Q5H9M0 696 aa19.5■□□□□ 0.71
CCDC38-203ENST00000546803 SRBD1Q8N5C6 995 aaKnown RBP19.5■□□□□ 0.71
CCDC38-203ENST00000546803 RRP36Q96EU6 259 aaKnown RBP19.5■□□□□ 0.71
CCDC38-203ENST00000546803 ZNF333Q96JL9 665 aa19.5■□□□□ 0.71
CCDC38-203ENST00000546803 PIGSQ96S52 555 aa19.5■□□□□ 0.71
CCDC38-203ENST00000546803 MRPL11Q9Y3B7 192 aaKnown RBP19.5■□□□□ 0.71
CCDC38-203ENST00000546803 ZSWIM8A7E2V4 1837 aa19.49■□□□□ 0.71
CCDC38-203ENST00000546803 PLEKHA8P1O95397 391 aa19.49■□□□□ 0.71
CCDC38-203ENST00000546803 RBM25P49756 843 aaKnown RBP19.49■□□□□ 0.71
CCDC38-203ENST00000546803 ANKRD1Q15327 319 aa19.49■□□□□ 0.71
CCDC38-203ENST00000546803 ZNF792Q3KQV3 632 aa19.49■□□□□ 0.71
CCDC38-203ENST00000546803 USH1GQ495M9 461 aa19.49■□□□□ 0.71
CCDC38-203ENST00000546803 OLFML2BQ68BL8 750 aa19.49■□□□□ 0.71
CCDC38-203ENST00000546803 HOMER1Q86YM7 354 aa19.49■□□□□ 0.71
CCDC38-203ENST00000546803 RGS22Q8NE09 1264 aa19.49■□□□□ 0.71
CCDC38-203ENST00000546803 CLEC4DQ8WXI8 215 aa19.49■□□□□ 0.71
CCDC38-203ENST00000546803 TRIB2Q92519 343 aa19.49■□□□□ 0.71
CCDC38-203ENST00000546803 ZNF274Q96GC6 653 aaPredicted RBP19.49■□□□□ 0.71
CCDC38-203ENST00000546803 A1CFQ9NQ94 594 aaKnown RBP19.49■□□□□ 0.71
CCDC38-203ENST00000546803 NID2Q14112 1375 aa19.48■□□□□ 0.71
CCDC38-203ENST00000546803 INHAP05111 366 aa19.48■□□□□ 0.71
CCDC38-203ENST00000546803 PGK2P07205 417 aa19.48■□□□□ 0.71
CCDC38-203ENST00000546803 PDIA3P30101 505 aaKnown RBP19.48■□□□□ 0.71
CCDC38-203ENST00000546803 CCL14Q16627 93 aa19.48■□□□□ 0.71
CCDC38-203ENST00000546803 MFSD14CQ5VZR4 134 aa19.48■□□□□ 0.71
CCDC38-203ENST00000546803 MSL3Q8N5Y2 521 aaKnown RBP19.48■□□□□ 0.71
CCDC38-203ENST00000546803 MAML3Q96JK9 1138 aa19.48■□□□□ 0.71
CCDC38-203ENST00000546803 FAM217BQ9NTX9 383 aaPredicted RBP19.48■□□□□ 0.71
CCDC38-203ENST00000546803 SEC63Q9UGP8 760 aaKnown RBP19.48■□□□□ 0.71
CCDC38-203ENST00000546803 POTEB2H3BUK9 544 aa19.47■□□□□ 0.71
CCDC38-203ENST00000546803 NFIBO00712 420 aa19.47■□□□□ 0.71
CCDC38-203ENST00000546803 TAL1P17542 331 aaPredicted RBP19.47■□□□□ 0.71
CCDC38-203ENST00000546803 NSMFQ6X4W1 530 aa19.47■□□□□ 0.71
CCDC38-203ENST00000546803 ZNF467Q7Z7K2 595 aaPredicted RBP19.47■□□□□ 0.71
CCDC38-203ENST00000546803 MCF2L2Q86YR7 1114 aa19.47■□□□□ 0.71
CCDC38-203ENST00000546803 CYP39A1Q9NYL5 469 aa19.47■□□□□ 0.71
CCDC38-203ENST00000546803 PCDHA1Q9Y5I3 950 aa19.47■□□□□ 0.71
CCDC38-203ENST00000546803 PPP1R11O60927 126 aaPredicted RBP19.46■□□□□ 0.71
CCDC38-203ENST00000546803 IGHA2P01877 340 aa19.46■□□□□ 0.71
CCDC38-203ENST00000546803 CDC27P30260 824 aa19.46■□□□□ 0.71
CCDC38-203ENST00000546803 NEK4P51957 841 aa19.46■□□□□ 0.71
CCDC38-203ENST00000546803 MAP3K21Q5TCX8 1036 aa19.46■□□□□ 0.71
CCDC38-203ENST00000546803 CMTR1Q8N1G2 835 aaKnown RBP19.46■□□□□ 0.71
CCDC38-203ENST00000546803 FAM133AQ8N9E0 248 aa19.46■□□□□ 0.71
CCDC38-203ENST00000546803 IL27Q8NEV9 243 aa19.46■□□□□ 0.71
CCDC38-203ENST00000546803 BACH2Q9BYV9 841 aa19.46■□□□□ 0.71
CCDC38-203ENST00000546803 FLRT1Q9NZU1 646 aa19.46■□□□□ 0.71
CCDC38-203ENST00000546803 MGAMO43451 1857 aa19.45■□□□□ 0.7
CCDC38-203ENST00000546803 CCDC85CA6NKD9 419 aa19.45■□□□□ 0.7
CCDC38-203ENST00000546803 ADD1P35611 737 aaKnown RBP19.45■□□□□ 0.7
CCDC38-203ENST00000546803 FUT2Q10981 343 aa19.45■□□□□ 0.7
CCDC38-203ENST00000546803 BAATQ14032 418 aaPredicted RBP19.45■□□□□ 0.7
CCDC38-203ENST00000546803 RNF207Q6ZRF8 634 aa19.45■□□□□ 0.7
CCDC38-203ENST00000546803 CCDC82Q8N4S0 544 aa19.45■□□□□ 0.7
CCDC38-203ENST00000546803 SAMD3Q8N6K7 520 aa19.45■□□□□ 0.7
CCDC38-203ENST00000546803 PIBF1Q8WXW3 757 aa19.45■□□□□ 0.7
CCDC38-203ENST00000546803 ZNF236Q9UL36 1845 aa19.45■□□□□ 0.7
CCDC38-203ENST00000546803 PTPDC1A2A3K4 754 aa19.44■□□□□ 0.7
CCDC38-203ENST00000546803 PRKAR2AP13861 404 aaKnown RBP19.44■□□□□ 0.7
CCDC38-203ENST00000546803 AK2P54819 239 aa19.44■□□□□ 0.7
CCDC38-203ENST00000546803 MAMDC4Q6UXC1 1216 aa19.44■□□□□ 0.7
CCDC38-203ENST00000546803 KIF2CQ99661 725 aa19.44■□□□□ 0.7
CCDC38-203ENST00000546803 TINF2Q9BSI4 451 aa19.44■□□□□ 0.7
CCDC38-203ENST00000546803 TMEM106CQ9BVX2 250 aa19.44■□□□□ 0.7
CCDC38-203ENST00000546803 HMX1Q9NP08 348 aaPredicted RBP19.44■□□□□ 0.7
CCDC38-203ENST00000546803 MAP3K20Q9NYL2 800 aaKnown RBP19.44■□□□□ 0.7
CCDC38-203ENST00000546803 RBM27Q9P2N5 1060 aaKnown RBP19.44■□□□□ 0.7
CCDC38-203ENST00000546803 NRBP1Q9UHY1 535 aa19.44■□□□□ 0.7
CCDC38-203ENST00000546803 RPTORQ8N122 1335 aa19.44■□□□□ 0.7
CCDC38-203ENST00000546803 CNTNAP5Q8WYK1 1306 aa19.44■□□□□ 0.7
CCDC38-203ENST00000546803 COL11A1P12107 1806 aaPredicted RBP19.44■□□□□ 0.7
CCDC38-203ENST00000546803 LOC102724159A0A0B4J2E5 919 aa19.43■□□□□ 0.7
CCDC38-203ENST00000546803 CCL5P13501 91 aa19.43■□□□□ 0.7
CCDC38-203ENST00000546803 CYP2C19P33261 490 aa19.43■□□□□ 0.7
CCDC38-203ENST00000546803 RPS6P62753 249 aaKnown RBP19.43■□□□□ 0.7
CCDC38-203ENST00000546803 CACNB2Q08289 660 aaPredicted RBP19.43■□□□□ 0.7
CCDC38-203ENST00000546803 TRIM32Q13049 653 aa19.43■□□□□ 0.7
CCDC38-203ENST00000546803 PWP2Q15269 919 aaKnown RBP19.43■□□□□ 0.7
CCDC38-203ENST00000546803 MTFR1Q15390 333 aa19.43■□□□□ 0.7
CCDC38-203ENST00000546803 LARP6Q9BRS8 491 aaKnown RBP19.43■□□□□ 0.7
CCDC38-203ENST00000546803 ADD3Q9UEY8 706 aaKnown RBP19.43■□□□□ 0.7
CCDC38-203ENST00000546803 V9GY48 417 aaPredicted RBP19.43■□□□□ 0.7
CCDC38-203ENST00000546803 SYNGAP1Q96PV0 1343 aa19.43■□□□□ 0.7
CCDC38-203ENST00000546803 SOWAHBA6NEL2 793 aa19.42■□□□□ 0.7
CCDC38-203ENST00000546803 ASB14A6NK59 587 aa19.42■□□□□ 0.7
CCDC38-203ENST00000546803 CALML3P27482 149 aa19.42■□□□□ 0.7
CCDC38-203ENST00000546803 CCT2P78371 535 aaKnown RBP19.42■□□□□ 0.7
CCDC38-203ENST00000546803 CNTN2Q02246 1040 aa19.42■□□□□ 0.7
CCDC38-203ENST00000546803 GHRHRQ02643 423 aa19.42■□□□□ 0.7
CCDC38-203ENST00000546803 CPLX2Q6PUV4 134 aaKnown RBP19.42■□□□□ 0.7
CCDC38-203ENST00000546803 FGD4Q96M96 766 aa19.42■□□□□ 0.7
CCDC38-203ENST00000546803 TBC1D32Q96NH3 1257 aa19.42■□□□□ 0.7
CCDC38-203ENST00000546803 RNF208Q9H0X6 261 aa19.42■□□□□ 0.7
CCDC38-203ENST00000546803 TPCN1Q9ULQ1 816 aa19.42■□□□□ 0.7
CCDC38-203ENST00000546803 hCG_1984214I3L0E3 225 aa19.41■□□□□ 0.7
CCDC38-203ENST00000546803 MYCP01106 439 aaPredicted RBP19.41■□□□□ 0.7
CCDC38-203ENST00000546803 IFNAR1P17181 557 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms