RNA–Protein interactions for RNA: ENST00000546776.5

TROAP-204, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 1,011 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-204ENST00000546776 DSG3P32926 999 aa12.92□□□□□ -0.34
TROAP-204ENST00000546776 HERVK_113P62684 666 aa12.92□□□□□ -0.34
TROAP-204ENST00000546776 PKN1Q16512 942 aa12.92□□□□□ -0.34
TROAP-204ENST00000546776 QRICH1Q2TAL8 776 aa12.92□□□□□ -0.34
TROAP-204ENST00000546776 PPP1R18Q6NYC8 613 aa12.92□□□□□ -0.34
TROAP-204ENST00000546776 FBXO11Q86XK2 927 aa12.92□□□□□ -0.34
TROAP-204ENST00000546776 COA7Q96BR5 231 aa12.92□□□□□ -0.34
TROAP-204ENST00000546776 RANBP17Q9H2T7 1088 aaKnown RBP12.92□□□□□ -0.34
TROAP-204ENST00000546776 BRMS1Q9HCU9 246 aa12.92□□□□□ -0.34
TROAP-204ENST00000546776 FBXO28Q9NVF7 368 aa12.92□□□□□ -0.34
TROAP-204ENST00000546776 BARHL2Q9NY43 387 aa12.92□□□□□ -0.34
TROAP-204ENST00000546776 COL11A1P12107 1806 aaPredicted RBP12.91□□□□□ -0.34
TROAP-204ENST00000546776 TNPO2O14787 897 aaKnown RBP12.91□□□□□ -0.34
TROAP-204ENST00000546776 DDIT3P35638 169 aa12.91□□□□□ -0.34
TROAP-204ENST00000546776 OAZ1P54368 228 aa12.91□□□□□ -0.34
TROAP-204ENST00000546776 NAPAP54920 295 aa12.91□□□□□ -0.34
TROAP-204ENST00000546776 NLRP5P59047 1200 aa12.91□□□□□ -0.34
TROAP-204ENST00000546776 GNL2Q13823 731 aaKnown RBP12.91□□□□□ -0.34
TROAP-204ENST00000546776 SLC35G1Q2M3R5 365 aa12.91□□□□□ -0.34
TROAP-204ENST00000546776 GALNT17Q6IS24 598 aa12.91□□□□□ -0.34
TROAP-204ENST00000546776 MB21D1Q8N884 522 aa12.91□□□□□ -0.34
TROAP-204ENST00000546776 GPRC5AQ8NFJ5 357 aa12.91□□□□□ -0.34
TROAP-204ENST00000546776 FBXO18Q8NFZ0 1043 aa12.91□□□□□ -0.34
TROAP-204ENST00000546776 RAET1EQ8TD07 263 aa12.91□□□□□ -0.34
TROAP-204ENST00000546776 P2RX7Q99572 595 aaKnown RBP12.91□□□□□ -0.34
TROAP-204ENST00000546776 GLT8D2Q9H1C3 349 aa12.91□□□□□ -0.34
TROAP-204ENST00000546776 SLC38A10Q9HBR0 1119 aa12.91□□□□□ -0.34
TROAP-204ENST00000546776 PCDHA1Q9Y5I3 950 aa12.91□□□□□ -0.34
TROAP-204ENST00000546776 RLFQ13129 1914 aa12.91□□□□□ -0.34
TROAP-204ENST00000546776 STXBP3O00186 592 aa12.9□□□□□ -0.34
TROAP-204ENST00000546776 VWA5AO00534 786 aa12.9□□□□□ -0.34
TROAP-204ENST00000546776 DTNBO60941 627 aa12.9□□□□□ -0.34
TROAP-204ENST00000546776 ECM2O94769 699 aaPredicted RBP12.9□□□□□ -0.34
TROAP-204ENST00000546776 ICAM1P05362 532 aa12.9□□□□□ -0.34
TROAP-204ENST00000546776 GNA11P29992 359 aa12.9□□□□□ -0.34
TROAP-204ENST00000546776 FOSBP53539 338 aa12.9□□□□□ -0.34
TROAP-204ENST00000546776 CCNA1P78396 465 aa12.9□□□□□ -0.34
TROAP-204ENST00000546776 SLC9C1Q4G0N8 1177 aa12.9□□□□□ -0.34
TROAP-204ENST00000546776 KRT40Q6A162 431 aa12.9□□□□□ -0.34
TROAP-204ENST00000546776 WWC2Q6AWC2 1192 aa12.9□□□□□ -0.34
TROAP-204ENST00000546776 CCDC174Q6PII3 467 aa12.9□□□□□ -0.34
TROAP-204ENST00000546776 TEX2Q8IWB9 1127 aa12.9□□□□□ -0.34
TROAP-204ENST00000546776 BICD2Q8TD16 824 aa12.9□□□□□ -0.34
TROAP-204ENST00000546776 ATG4CQ96DT6 458 aa12.9□□□□□ -0.34
TROAP-204ENST00000546776 TRIM47Q96LD4 638 aa12.9□□□□□ -0.34
TROAP-204ENST00000546776 AIFM3Q96NN9 605 aa12.9□□□□□ -0.34
TROAP-204ENST00000546776 C6orf50Q9HD87 102 aa12.9□□□□□ -0.34
TROAP-204ENST00000546776 VPS54Q9P1Q0 977 aa12.9□□□□□ -0.34
TROAP-204ENST00000546776 MORF4L1Q9UBU8 362 aa12.9□□□□□ -0.34
TROAP-204ENST00000546776 SRRDQ9UH36 339 aa12.9□□□□□ -0.34
TROAP-204ENST00000546776 ABCB11O95342 1321 aa12.89□□□□□ -0.35
TROAP-204ENST00000546776 A0A0G2JMZ2 1700 aa12.89□□□□□ -0.35
TROAP-204ENST00000546776 ESYT2A0FGR8 921 aa12.89□□□□□ -0.35
TROAP-204ENST00000546776 SPDYE16A6NNV3 312 aaPredicted RBP12.89□□□□□ -0.35
TROAP-204ENST00000546776 MMP1P03956 469 aa12.89□□□□□ -0.35
TROAP-204ENST00000546776 MCTP1Q6DN14 999 aa12.89□□□□□ -0.35
TROAP-204ENST00000546776 LBX2Q6XYB7 198 aa12.89□□□□□ -0.35
TROAP-204ENST00000546776 GPKOWQ92917 476 aaPredicted RBP eCLIP12.89□□□□□ -0.35
TROAP-204ENST00000546776 PHF20Q9BVI0 1012 aa12.89□□□□□ -0.35
TROAP-204ENST00000546776 ARHGAP39Q9C0H5 1083 aa12.89□□□□□ -0.35
TROAP-204ENST00000546776 CCPG1Q9ULG6 757 aa12.89□□□□□ -0.35
TROAP-204ENST00000546776 ADAMTS5Q9UNA0 930 aa12.89□□□□□ -0.35
TROAP-204ENST00000546776 MRPL11Q9Y3B7 192 aaKnown RBP12.89□□□□□ -0.35
TROAP-204ENST00000546776 RABGAP1Q9Y3P9 1069 aa12.89□□□□□ -0.35
TROAP-204ENST00000546776 ATP6V1DQ9Y5K8 247 aa12.89□□□□□ -0.35
TROAP-204ENST00000546776 ATP2A1O14983 1001 aa12.88□□□□□ -0.35
TROAP-204ENST00000546776 ZSCAN22P10073 491 aaPredicted RBP12.88□□□□□ -0.35
TROAP-204ENST00000546776 MAPK4P31152 587 aa12.88□□□□□ -0.35
TROAP-204ENST00000546776 COPB2P35606 906 aa12.88□□□□□ -0.35
TROAP-204ENST00000546776 KRT2P35908 639 aa12.88□□□□□ -0.35
TROAP-204ENST00000546776 ADCY7P51828 1080 aa12.88□□□□□ -0.35
TROAP-204ENST00000546776 MRPL12P52815 198 aaKnown RBP12.88□□□□□ -0.35
TROAP-204ENST00000546776 SNAP25P60880 206 aa12.88□□□□□ -0.35
TROAP-204ENST00000546776 GUCY1B3Q02153 619 aa12.88□□□□□ -0.35
TROAP-204ENST00000546776 USH1GQ495M9 461 aa12.88□□□□□ -0.35
TROAP-204ENST00000546776 MCTP2Q6DN12 878 aa12.88□□□□□ -0.35
TROAP-204ENST00000546776 CPXCR1Q8N123 301 aa12.88□□□□□ -0.35
TROAP-204ENST00000546776 CUL5Q93034 780 aa12.88□□□□□ -0.35
TROAP-204ENST00000546776 PAGR1Q9BTK6 254 aa12.88□□□□□ -0.35
TROAP-204ENST00000546776 TEX13BQ9BXU2 312 aa12.88□□□□□ -0.35
TROAP-204ENST00000546776 ZSCAN16Q9H4T2 348 aaPredicted RBP12.88□□□□□ -0.35
TROAP-204ENST00000546776 MTMR6Q9Y217 621 aa12.88□□□□□ -0.35
TROAP-204ENST00000546776 PTCH2Q9Y6C5 1203 aa12.88□□□□□ -0.35
TROAP-204ENST00000546776 RBBP6Q7Z6E9 1792 aaKnown RBP12.88□□□□□ -0.35
TROAP-204ENST00000546776 SMCO2A6NFE2 343 aa12.87□□□□□ -0.35
TROAP-204ENST00000546776 PPP1R11O60927 126 aaPredicted RBP12.87□□□□□ -0.35
TROAP-204ENST00000546776 BRD1O95696 1058 aa12.87□□□□□ -0.35
TROAP-204ENST00000546776 ERVK-9P63128 1117 aa12.87□□□□□ -0.35
TROAP-204ENST00000546776 ERVK-24P63145 666 aa12.87□□□□□ -0.35
TROAP-204ENST00000546776 TKFCQ3LXA3 575 aa12.87□□□□□ -0.35
TROAP-204ENST00000546776 MCF2L2Q86YR7 1114 aa12.87□□□□□ -0.35
TROAP-204ENST00000546776 DIS3L2Q8IYB7 885 aaKnown RBP12.87□□□□□ -0.35
TROAP-204ENST00000546776 SAMD3Q8N6K7 520 aa12.87□□□□□ -0.35
TROAP-204ENST00000546776 ARMC5Q96C12 935 aa12.87□□□□□ -0.35
TROAP-204ENST00000546776 ZMYND12Q9H0C1 365 aa12.87□□□□□ -0.35
TROAP-204ENST00000546776 FOXP1Q9H334 677 aaPredicted RBP12.87□□□□□ -0.35
TROAP-204ENST00000546776 RAVER2Q9HCJ3 691 aaKnown RBP12.87□□□□□ -0.35
TROAP-204ENST00000546776 RBPJLQ9UBG7 517 aa12.87□□□□□ -0.35
TROAP-204ENST00000546776 PCDHA4Q9UN74 947 aa12.87□□□□□ -0.35
TROAP-204ENST00000546776 KCNJ14Q9UNX9 436 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms