RNA–Protein interactions for RNA: ENST00000546433.5

SSH1-203, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 5,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-203ENST00000546433 FAM173BQ6P4H8 233 aa11.48□□□□□ -0.57
SSH1-203ENST00000546433 AFAP1L2Q8N4X5 818 aa11.48□□□□□ -0.57
SSH1-203ENST00000546433 TSPYL2Q9H2G4 693 aaPredicted RBP11.48□□□□□ -0.57
SSH1-203ENST00000546433 MAGEF1Q9HAY2 307 aa11.48□□□□□ -0.57
SSH1-203ENST00000546433 HAUS2Q9NVX0 235 aa11.48□□□□□ -0.57
SSH1-203ENST00000546433 MAPK8IP1Q9UQF2 711 aa11.48□□□□□ -0.57
SSH1-203ENST00000546433 POLR1AO95602 1720 aaPredicted RBP11.48□□□□□ -0.57
SSH1-203ENST00000546433 TLR3O15455 904 aaKnown RBP11.48□□□□□ -0.57
SSH1-203ENST00000546433 CETPP11597 493 aa11.48□□□□□ -0.57
SSH1-203ENST00000546433 HARSP12081 509 aaKnown RBP11.48□□□□□ -0.57
SSH1-203ENST00000546433 PPFIA1Q13136 1202 aa11.48□□□□□ -0.57
SSH1-203ENST00000546433 DNAJC21Q5F1R6 531 aaKnown RBP11.48□□□□□ -0.57
SSH1-203ENST00000546433 LGSNQ5TDP6 509 aa11.48□□□□□ -0.57
SSH1-203ENST00000546433 OTUD6AQ7L8S5 288 aa11.48□□□□□ -0.57
SSH1-203ENST00000546433 ZFP91Q96JP5 570 aaPredicted RBP11.48□□□□□ -0.57
SSH1-203ENST00000546433 N4BP1O75113 896 aaKnown RBP11.48□□□□□ -0.57
SSH1-203ENST00000546433 VIMP08670 466 aaKnown RBP11.48□□□□□ -0.57
SSH1-203ENST00000546433 CMA1P23946 247 aa11.48□□□□□ -0.57
SSH1-203ENST00000546433 PSMC4P43686 418 aa11.48□□□□□ -0.57
SSH1-203ENST00000546433 BEND3Q5T5X7 828 aa11.48□□□□□ -0.57
SSH1-203ENST00000546433 PRR5LQ6MZQ0 368 aa11.48□□□□□ -0.57
SSH1-203ENST00000546433 SLFN12Q8IYM2 578 aa11.48□□□□□ -0.57
SSH1-203ENST00000546433 BLIDQ8IZY5 108 aa11.48□□□□□ -0.57
SSH1-203ENST00000546433 SERTAD1Q9UHV2 236 aa11.48□□□□□ -0.57
SSH1-203ENST00000546433 SMCO2A6NFE2 343 aa11.48□□□□□ -0.57
SSH1-203ENST00000546433 GMNNO75496 209 aa11.48□□□□□ -0.57
SSH1-203ENST00000546433 PFKFB1P16118 471 aa11.48□□□□□ -0.57
SSH1-203ENST00000546433 IFNL3Q8IZI9 196 aa11.48□□□□□ -0.57
SSH1-203ENST00000546433 STMN2Q93045 179 aa11.48□□□□□ -0.57
SSH1-203ENST00000546433 RAB17Q9H0T7 212 aa11.48□□□□□ -0.57
SSH1-203ENST00000546433 H0YCG3 227 aa11.47□□□□□ -0.57
SSH1-203ENST00000546433 KCNQ3O43525 872 aa11.47□□□□□ -0.57
SSH1-203ENST00000546433 MYCLP12524 364 aaPredicted RBP11.47□□□□□ -0.57
SSH1-203ENST00000546433 GSPT1P15170 499 aaKnown RBP11.47□□□□□ -0.57
SSH1-203ENST00000546433 VPS54Q9P1Q0 977 aa11.47□□□□□ -0.57
SSH1-203ENST00000546433 STAP2Q9UGK3 403 aa11.47□□□□□ -0.57
SSH1-203ENST00000546433 GOLGA6BA6NDN3 693 aa11.47□□□□□ -0.57
SSH1-203ENST00000546433 CEP104O60308 925 aa11.47□□□□□ -0.57
SSH1-203ENST00000546433 NOL3O60936 208 aaKnown RBP11.47□□□□□ -0.57
SSH1-203ENST00000546433 P4HA1P13674 534 aa11.47□□□□□ -0.57
SSH1-203ENST00000546433 MAPK8IP2Q13387 824 aaPredicted RBP11.47□□□□□ -0.57
SSH1-203ENST00000546433 MTX1Q13505 466 aa11.47□□□□□ -0.57
SSH1-203ENST00000546433 DYMQ7RTS9 669 aa11.47□□□□□ -0.57
SSH1-203ENST00000546433 ADCY9O60503 1353 aa11.47□□□□□ -0.57
SSH1-203ENST00000546433 ATP11AP98196 1134 aa11.47□□□□□ -0.57
SSH1-203ENST00000546433 TRIM58Q8NG06 486 aa11.47□□□□□ -0.57
SSH1-203ENST00000546433 RSRC1Q96IZ7 334 aaKnown RBP11.47□□□□□ -0.57
SSH1-203ENST00000546433 PCDHB13Q9Y5F0 798 aa11.47□□□□□ -0.57
SSH1-203ENST00000546433 FCGRTP55899 365 aa11.47□□□□□ -0.57
SSH1-203ENST00000546433 ITIH3Q06033 890 aa11.47□□□□□ -0.57
SSH1-203ENST00000546433 CHADLQ6NUI6 762 aa11.47□□□□□ -0.57
SSH1-203ENST00000546433 USP50Q70EL3 339 aaPredicted RBP11.47□□□□□ -0.57
SSH1-203ENST00000546433 PEX26Q7Z412 305 aa11.47□□□□□ -0.57
SSH1-203ENST00000546433 UBE3CQ15386 1083 aa11.46□□□□□ -0.57
SSH1-203ENST00000546433 IFIH1Q9BYX4 1025 aaKnown RBP11.46□□□□□ -0.57
SSH1-203ENST00000546433 SERPINA10Q9UK55 444 aa11.46□□□□□ -0.57
SSH1-203ENST00000546433 KBTBD13C9JR72 458 aa11.46□□□□□ -0.57
SSH1-203ENST00000546433 NDUFAB1O14561 156 aa11.46□□□□□ -0.57
SSH1-203ENST00000546433 GYG1P46976 350 aa11.46□□□□□ -0.57
SSH1-203ENST00000546433 BRD3Q15059 726 aa11.46□□□□□ -0.57
SSH1-203ENST00000546433 DCUN1D2Q6PH85 259 aa11.46□□□□□ -0.57
SSH1-203ENST00000546433 MYOCDQ8IZQ8 938 aa11.46□□□□□ -0.57
SSH1-203ENST00000546433 ASIC3Q9UHC3 531 aa11.46□□□□□ -0.57
SSH1-203ENST00000546433 SUGT1Q9Y2Z0 365 aa11.46□□□□□ -0.57
SSH1-203ENST00000546433 PPP2R3BQ9Y5P8 575 aa11.46□□□□□ -0.57
SSH1-203ENST00000546433 U2AF2P26368 475 aaKnown RBP eCLIP11.46□□□□□ -0.57
SSH1-203ENST00000546433 PNOCQ13519 176 aa11.46□□□□□ -0.57
SSH1-203ENST00000546433 FANCBQ8NB91 859 aa11.46□□□□□ -0.57
SSH1-203ENST00000546433 OR8K1Q8NGG5 319 aa11.46□□□□□ -0.57
SSH1-203ENST00000546433 CCT6BQ92526 530 aa11.46□□□□□ -0.57
SSH1-203ENST00000546433 GREM2Q9H772 168 aa11.46□□□□□ -0.57
SSH1-203ENST00000546433 COPRSQ9NQ92 184 aa11.46□□□□□ -0.57
SSH1-203ENST00000546433 MKRN1Q9UHC7 482 aaKnown RBP11.46□□□□□ -0.57
SSH1-203ENST00000546433 A0A0D9SFI3 127 aa11.46□□□□□ -0.58
SSH1-203ENST00000546433 HSPD1P10809 573 aaKnown RBP11.46□□□□□ -0.58
SSH1-203ENST00000546433 PDE6AP16499 860 aa11.46□□□□□ -0.58
SSH1-203ENST00000546433 ARHGAP25P42331 645 aa11.46□□□□□ -0.58
SSH1-203ENST00000546433 APLP1P51693 650 aa11.46□□□□□ -0.58
SSH1-203ENST00000546433 ICA1Q05084 483 aa11.46□□□□□ -0.58
SSH1-203ENST00000546433 NSMFQ6X4W1 530 aa11.46□□□□□ -0.58
SSH1-203ENST00000546433 CEP57Q86XR8 500 aa11.46□□□□□ -0.58
SSH1-203ENST00000546433 AGBL3Q8NEM8 1001 aa11.46□□□□□ -0.58
SSH1-203ENST00000546433 XPO4Q9C0E2 1151 aaKnown RBP11.46□□□□□ -0.58
SSH1-203ENST00000546433 MRPL11Q9Y3B7 192 aaKnown RBP11.46□□□□□ -0.58
SSH1-203ENST00000546433 KCNJ18B7U540 433 aa11.46□□□□□ -0.58
SSH1-203ENST00000546433 DAPK3O43293 454 aa11.46□□□□□ -0.58
SSH1-203ENST00000546433 GTPBP6O43824 516 aaPredicted RBP11.46□□□□□ -0.58
SSH1-203ENST00000546433 GTF2A2P52657 109 aa11.46□□□□□ -0.58
SSH1-203ENST00000546433 KCNJ12Q14500 433 aa11.46□□□□□ -0.58
SSH1-203ENST00000546433 NKX1-1Q15270 411 aaPredicted RBP11.46□□□□□ -0.58
SSH1-203ENST00000546433 UAP1Q16222 522 aaPredicted RBP11.46□□□□□ -0.58
SSH1-203ENST00000546433 LDHDQ86WU2 507 aa11.46□□□□□ -0.58
SSH1-203ENST00000546433 MRFAP1L1Q96HT8 127 aa11.46□□□□□ -0.58
SSH1-203ENST00000546433 RASSF4Q9H2L5 321 aa11.46□□□□□ -0.58
SSH1-203ENST00000546433 CDHR2Q9BYE9 1310 aa11.46□□□□□ -0.58
SSH1-203ENST00000546433 HPDP32754 393 aaPredicted RBP11.45□□□□□ -0.58
SSH1-203ENST00000546433 MORC3Q14149 939 aa11.45□□□□□ -0.58
SSH1-203ENST00000546433 USP17L2Q6R6M4 530 aa11.45□□□□□ -0.58
SSH1-203ENST00000546433 RNF34Q969K3 372 aa11.45□□□□□ -0.58
SSH1-203ENST00000546433 SLF1Q9BQI6 1058 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms