RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 MRPS27Q92552 414 aaKnown RBP9.54□□□□□ -0.88
CLIP1-218ENST00000545889 ZSWIM5Q9P217 1185 aa9.54□□□□□ -0.88
CLIP1-218ENST00000545889 TXNDC16Q9P2K2 825 aa9.54□□□□□ -0.88
CLIP1-218ENST00000545889 NOC2LQ9Y3T9 749 aaKnown RBP9.54□□□□□ -0.88
CLIP1-218ENST00000545889 ZBBXA8MT70 800 aa9.54□□□□□ -0.88
CLIP1-218ENST00000545889 GSG1L2A8MUP6 293 aa9.54□□□□□ -0.88
CLIP1-218ENST00000545889 GCOM1H8Y6P7 765 aaPredicted RBP9.54□□□□□ -0.88
CLIP1-218ENST00000545889 DEXIO95424 95 aa9.54□□□□□ -0.88
CLIP1-218ENST00000545889 GAS8O95995 478 aa9.54□□□□□ -0.88
CLIP1-218ENST00000545889 MYZAPP0CAP1 466 aa9.54□□□□□ -0.88
CLIP1-218ENST00000545889 POLR2MP0CAP2 368 aa9.54□□□□□ -0.88
CLIP1-218ENST00000545889 GOLGA8HP0CJ92 632 aa9.54□□□□□ -0.88
CLIP1-218ENST00000545889 CHRM1P11229 460 aaPredicted RBP9.54□□□□□ -0.88
CLIP1-218ENST00000545889 PLCD1P51178 756 aa9.54□□□□□ -0.88
CLIP1-218ENST00000545889 STX1AQ16623 288 aa9.54□□□□□ -0.88
CLIP1-218ENST00000545889 PIK3AP1Q6ZUJ8 805 aa9.54□□□□□ -0.88
CLIP1-218ENST00000545889 KRT25Q7Z3Z0 450 aa9.54□□□□□ -0.88
CLIP1-218ENST00000545889 TBC1D10CQ8IV04 446 aa9.54□□□□□ -0.88
CLIP1-218ENST00000545889 SPICE1Q8N0Z3 855 aa9.54□□□□□ -0.88
CLIP1-218ENST00000545889 CCDC102AQ96A19 550 aa9.54□□□□□ -0.88
CLIP1-218ENST00000545889 MIER3Q7Z3K6 550 aa9.54□□□□□ -0.88
CLIP1-218ENST00000545889 KRT26Q7Z3Y9 468 aa9.54□□□□□ -0.88
CLIP1-218ENST00000545889 ZNF654Q8IZM8 581 aa9.54□□□□□ -0.88
CLIP1-218ENST00000545889 REXO1Q8N1G1 1221 aaKnown RBP9.54□□□□□ -0.88
CLIP1-218ENST00000545889 RETREG2Q8NC44 543 aa9.54□□□□□ -0.88
CLIP1-218ENST00000545889 RAB3IL1Q8TBN0 382 aa9.54□□□□□ -0.88
CLIP1-218ENST00000545889 KIAA1524Q8TCG1 905 aa9.54□□□□□ -0.88
CLIP1-218ENST00000545889 NSMCE1Q8WV22 266 aa9.54□□□□□ -0.88
CLIP1-218ENST00000545889 SREK1Q8WXA9 508 aaKnown RBP9.54□□□□□ -0.88
CLIP1-218ENST00000545889 SUFUQ9UMX1 484 aa9.54□□□□□ -0.88
CLIP1-218ENST00000545889 CD2APQ9Y5K6 639 aa9.54□□□□□ -0.88
CLIP1-218ENST00000545889 COL18A1P39060 1754 aa9.53□□□□□ -0.88
CLIP1-218ENST00000545889 PRPF6O94906 941 aaKnown RBP9.53□□□□□ -0.88
CLIP1-218ENST00000545889 GDF11O95390 407 aa9.53□□□□□ -0.88
CLIP1-218ENST00000545889 EPB41P11171 864 aaKnown RBP9.53□□□□□ -0.88
CLIP1-218ENST00000545889 YARSP54577 528 aaKnown RBP9.53□□□□□ -0.88
CLIP1-218ENST00000545889 FBXO11Q86XK2 927 aa9.53□□□□□ -0.88
CLIP1-218ENST00000545889 CCDC50Q8IVM0 306 aa9.53□□□□□ -0.88
CLIP1-218ENST00000545889 AKT1S1Q96B36 256 aa9.53□□□□□ -0.88
CLIP1-218ENST00000545889 CCDC114Q96M63 670 aa9.53□□□□□ -0.88
CLIP1-218ENST00000545889 LRWD1Q9UFC0 647 aa9.53□□□□□ -0.88
CLIP1-218ENST00000545889 RGS17Q9UGC6 210 aaPredicted RBP9.53□□□□□ -0.88
CLIP1-218ENST00000545889 STYK1Q6J9G0 422 aa9.53□□□□□ -0.88
CLIP1-218ENST00000545889 NRBP2Q9NSY0 501 aa9.53□□□□□ -0.88
CLIP1-218ENST00000545889 STK24Q9Y6E0 443 aa9.53□□□□□ -0.88
CLIP1-218ENST00000545889 SH3BP5O60239 455 aa9.53□□□□□ -0.88
CLIP1-218ENST00000545889 URI1O94763 535 aaPredicted RBP9.53□□□□□ -0.88
CLIP1-218ENST00000545889 CYLC1P35663 651 aaPredicted RBP9.53□□□□□ -0.88
CLIP1-218ENST00000545889 RAPGEF1Q13905 1077 aa9.53□□□□□ -0.88
CLIP1-218ENST00000545889 TDRD7Q8NHU6 1098 aaKnown RBP9.53□□□□□ -0.88
CLIP1-218ENST00000545889 SNX29Q8TEQ0 813 aa9.53□□□□□ -0.88
CLIP1-218ENST00000545889 ZSCAN10Q96SZ4 725 aaPredicted RBP9.53□□□□□ -0.88
CLIP1-218ENST00000545889 DCP1AQ9NPI6 582 aaPredicted RBP9.53□□□□□ -0.88
CLIP1-218ENST00000545889 FAM169AQ9Y6X4 670 aa9.53□□□□□ -0.88
CLIP1-218ENST00000545889 MORC2Q9Y6X9 1032 aaPredicted RBP9.53□□□□□ -0.88
CLIP1-218ENST00000545889 ATP2A1O14983 1001 aa9.52□□□□□ -0.88
CLIP1-218ENST00000545889 MAP2K1Q02750 393 aaPredicted RBP9.52□□□□□ -0.88
CLIP1-218ENST00000545889 HERC4Q5GLZ8 1057 aaPredicted RBP9.52□□□□□ -0.88
CLIP1-218ENST00000545889 GSTA5Q7RTV2 222 aa9.52□□□□□ -0.88
CLIP1-218ENST00000545889 TPH2Q8IWU9 490 aa9.52□□□□□ -0.88
CLIP1-218ENST00000545889 VGLL2Q8N8G2 317 aa9.52□□□□□ -0.88
CLIP1-218ENST00000545889 GSDMBQ8TAX9 411 aa9.52□□□□□ -0.88
CLIP1-218ENST00000545889 INTS4Q96HW7 963 aaKnown RBP9.52□□□□□ -0.88
CLIP1-218ENST00000545889 CTAGE1Q96RT6 745 aa9.52□□□□□ -0.88
CLIP1-218ENST00000545889 MAK16Q9BXY0 300 aaKnown RBP9.52□□□□□ -0.88
CLIP1-218ENST00000545889 FTOQ9C0B1 505 aaKnown RBP eCLIP9.52□□□□□ -0.88
CLIP1-218ENST00000545889 GBP3Q9H0R5 595 aa9.52□□□□□ -0.88
CLIP1-218ENST00000545889 CXorf56Q9H5V9 222 aa9.52□□□□□ -0.88
CLIP1-218ENST00000545889 STIM2Q9P246 746 aa9.52□□□□□ -0.88
CLIP1-218ENST00000545889 F13A1P00488 732 aa9.52□□□□□ -0.89
CLIP1-218ENST00000545889 LRMPQ12912 555 aa9.52□□□□□ -0.89
CLIP1-218ENST00000545889 ANKRD7Q92527 254 aa9.52□□□□□ -0.89
CLIP1-218ENST00000545889 IQCGQ9H095 443 aaKnown RBP9.52□□□□□ -0.89
CLIP1-218ENST00000545889 JADE2Q9NQC1 790 aa9.52□□□□□ -0.89
CLIP1-218ENST00000545889 SCN11AQ9UI33 1791 aa9.52□□□□□ -0.89
CLIP1-218ENST00000545889 KIAA0754O94854 1291 aa9.52□□□□□ -0.89
CLIP1-218ENST00000545889 CCDC14Q49A88 953 aa9.52□□□□□ -0.89
CLIP1-218ENST00000545889 TMC6Q7Z403 805 aa9.52□□□□□ -0.89
CLIP1-218ENST00000545889 DDX12PQ92771 950 aa9.52□□□□□ -0.89
CLIP1-218ENST00000545889 KCNQ5Q9NR82 932 aa9.52□□□□□ -0.89
CLIP1-218ENST00000545889 SERPINB13Q9UIV8 391 aa9.52□□□□□ -0.89
CLIP1-218ENST00000545889 TMEM110-MUSTN1A8MSY1 372 aa9.52□□□□□ -0.89
CLIP1-218ENST00000545889 P4HA1P13674 534 aa9.52□□□□□ -0.89
CLIP1-218ENST00000545889 RASA3Q14644 834 aa9.52□□□□□ -0.89
CLIP1-218ENST00000545889 PPP2R5BQ15173 497 aa9.52□□□□□ -0.89
CLIP1-218ENST00000545889 RILPL1Q5EBL4 403 aa9.52□□□□□ -0.89
CLIP1-218ENST00000545889 STOX1Q6ZVD7 989 aa9.52□□□□□ -0.89
CLIP1-218ENST00000545889 MYCT1Q8N699 235 aa9.52□□□□□ -0.89
CLIP1-218ENST00000545889 PNMA1Q8ND90 353 aa9.52□□□□□ -0.89
CLIP1-218ENST00000545889 KIFAP3Q92845 792 aa9.52□□□□□ -0.89
CLIP1-218ENST00000545889 MTIF3Q9H2K0 278 aaKnown RBP9.52□□□□□ -0.89
CLIP1-218ENST00000545889 MROH7-TTC4A0A0A0MT08 1334 aa9.52□□□□□ -0.89
CLIP1-218ENST00000545889 KIF2AO00139 706 aaPredicted RBP9.51□□□□□ -0.89
CLIP1-218ENST00000545889 NMT2O60551 498 aa9.51□□□□□ -0.89
CLIP1-218ENST00000545889 EXOC3O60645 756 aa9.51□□□□□ -0.89
CLIP1-218ENST00000545889 IVLP07476 585 aa9.51□□□□□ -0.89
CLIP1-218ENST00000545889 PDIA3P30101 505 aaKnown RBP9.51□□□□□ -0.89
CLIP1-218ENST00000545889 KRT9P35527 623 aa9.51□□□□□ -0.89
CLIP1-218ENST00000545889 SATB1Q01826 763 aa9.51□□□□□ -0.89
CLIP1-218ENST00000545889 GABPAQ06546 454 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms