RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 SDR42E1Q8WUS8 393 aa18.64■□□□□ 0.57
CLSTN3-216ENST00000545663 ZNF512BQ96KM6 892 aaPredicted RBP18.64■□□□□ 0.57
CLSTN3-216ENST00000545663 SLF1Q9BQI6 1058 aa18.64■□□□□ 0.57
CLSTN3-216ENST00000545663 RAVER2Q9HCJ3 691 aaKnown RBP18.64■□□□□ 0.57
CLSTN3-216ENST00000545663 PTPRSQ13332 1948 aa18.64■□□□□ 0.57
CLSTN3-216ENST00000545663 VPS13AQ96RL7 3174 aa18.64■□□□□ 0.57
CLSTN3-216ENST00000545663 MAGEB6P1A0A0J9YX57 407 aa18.63■□□□□ 0.57
CLSTN3-216ENST00000545663 LINC01553A4QN01 128 aa18.63■□□□□ 0.57
CLSTN3-216ENST00000545663 ZEB2O60315 1214 aa18.63■□□□□ 0.57
CLSTN3-216ENST00000545663 IGSF3O75054 1194 aa18.63■□□□□ 0.57
CLSTN3-216ENST00000545663 RFC2P35250 354 aa18.63■□□□□ 0.57
CLSTN3-216ENST00000545663 WDR5P61964 334 aaKnown RBP18.63■□□□□ 0.57
CLSTN3-216ENST00000545663 EP400NLQ6ZTU2 488 aa18.63■□□□□ 0.57
CLSTN3-216ENST00000545663 ADHFE1Q8IWW8 467 aa18.63■□□□□ 0.57
CLSTN3-216ENST00000545663 TGS1Q96RS0 853 aaKnown RBP18.63■□□□□ 0.57
CLSTN3-216ENST00000545663 MRS2Q9HD23 443 aa18.63■□□□□ 0.57
CLSTN3-216ENST00000545663 SOWAHBA6NEL2 793 aa18.62■□□□□ 0.57
CLSTN3-216ENST00000545663 KCNJ6P48051 423 aa18.62■□□□□ 0.57
CLSTN3-216ENST00000545663 EEPD1Q7L9B9 569 aa18.62■□□□□ 0.57
CLSTN3-216ENST00000545663 ALG13Q9NP73 1137 aaKnown RBP18.62■□□□□ 0.57
CLSTN3-216ENST00000545663 DBNLQ9UJU6 430 aaKnown RBP18.62■□□□□ 0.57
CLSTN3-216ENST00000545663 CACNA1HO95180 2353 aa18.61■□□□□ 0.57
CLSTN3-216ENST00000545663 CYP2D7A0A087X1C5 515 aa18.61■□□□□ 0.57
CLSTN3-216ENST00000545663 GPNMBQ14956 572 aa18.61■□□□□ 0.57
CLSTN3-216ENST00000545663 TCTN1Q2MV58 587 aa18.61■□□□□ 0.57
CLSTN3-216ENST00000545663 HERC4Q5GLZ8 1057 aaPredicted RBP18.61■□□□□ 0.57
CLSTN3-216ENST00000545663 RETREG2Q8NC44 543 aa18.61■□□□□ 0.57
CLSTN3-216ENST00000545663 C17orf80Q9BSJ5 609 aa18.61■□□□□ 0.57
CLSTN3-216ENST00000545663 UPF3BQ9BZI7 483 aaKnown RBP18.61■□□□□ 0.57
CLSTN3-216ENST00000545663 CRNKL1Q9BZJ0 848 aaKnown RBP18.61■□□□□ 0.57
CLSTN3-216ENST00000545663 GOPCQ9HD26 462 aa18.61■□□□□ 0.57
CLSTN3-216ENST00000545663 DCP1AQ9NPI6 582 aaPredicted RBP18.61■□□□□ 0.57
CLSTN3-216ENST00000545663 GPR108Q9NPR9 543 aa18.61■□□□□ 0.57
CLSTN3-216ENST00000545663 PRKAG3Q9UGI9 489 aa18.61■□□□□ 0.57
CLSTN3-216ENST00000545663 SWAP70Q9UH65 585 aa18.61■□□□□ 0.57
CLSTN3-216ENST00000545663 NAV1Q8NEY1 1877 aa18.6■□□□□ 0.57
CLSTN3-216ENST00000545663 BAIAP3O94812 1187 aa18.6■□□□□ 0.57
CLSTN3-216ENST00000545663 ALDH1L2Q3SY69 923 aa18.6■□□□□ 0.57
CLSTN3-216ENST00000545663 FAM47CQ5HY64 1035 aa18.6■□□□□ 0.57
CLSTN3-216ENST00000545663 TAPT1Q6NXT6 567 aa18.6■□□□□ 0.57
CLSTN3-216ENST00000545663 FAM117BQ6P1L5 589 aa18.6■□□□□ 0.57
CLSTN3-216ENST00000545663 PBXIP1Q96AQ6 731 aa18.6■□□□□ 0.57
CLSTN3-216ENST00000545663 RAD9AQ99638 391 aa18.6■□□□□ 0.57
CLSTN3-216ENST00000545663 CCDC8Q9H0W5 538 aaPredicted RBP18.6■□□□□ 0.57
CLSTN3-216ENST00000545663 HOMER2Q9NSB8 354 aa18.6■□□□□ 0.57
CLSTN3-216ENST00000545663 ATP2A1O14983 1001 aa18.59■□□□□ 0.57
CLSTN3-216ENST00000545663 GNAI3P08754 354 aa18.59■□□□□ 0.57
CLSTN3-216ENST00000545663 CDK8P49336 464 aa18.59■□□□□ 0.57
CLSTN3-216ENST00000545663 NBPF20Q3BBV1 942 aa18.59■□□□□ 0.57
CLSTN3-216ENST00000545663 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.59■□□□□ 0.57
CLSTN3-216ENST00000545663 RNF135Q8IUD6 432 aa18.59■□□□□ 0.57
CLSTN3-216ENST00000545663 FAM133AQ8N9E0 248 aa18.59■□□□□ 0.57
CLSTN3-216ENST00000545663 EDAQ92838 391 aa18.59■□□□□ 0.57
CLSTN3-216ENST00000545663 KANSL2Q9H9L4 492 aa18.59■□□□□ 0.57
CLSTN3-216ENST00000545663 TMEM221A6NGB7 291 aa18.58■□□□□ 0.56
CLSTN3-216ENST00000545663 M0R296 226 aa18.58■□□□□ 0.56
CLSTN3-216ENST00000545663 PITPNM1O00562 1244 aa18.58■□□□□ 0.56
CLSTN3-216ENST00000545663 PRKAB2O43741 272 aa18.58■□□□□ 0.56
CLSTN3-216ENST00000545663 ZBED4O75132 1171 aa18.58■□□□□ 0.56
CLSTN3-216ENST00000545663 GJB5O95377 273 aa18.58■□□□□ 0.56
CLSTN3-216ENST00000545663 MYL3P08590 195 aa18.58■□□□□ 0.56
CLSTN3-216ENST00000545663 PURAQ00577 322 aaKnown RBP18.58■□□□□ 0.56
CLSTN3-216ENST00000545663 BMP8AQ7Z5Y6 402 aa18.58■□□□□ 0.56
CLSTN3-216ENST00000545663 FBXO16Q8IX29 292 aaPredicted RBP18.58■□□□□ 0.56
CLSTN3-216ENST00000545663 LCORLQ8N3X6 602 aa18.58■□□□□ 0.56
CLSTN3-216ENST00000545663 PRPF38AQ8NAV1 312 aaKnown RBP18.58■□□□□ 0.56
CLSTN3-216ENST00000545663 KIFC2Q96AC6 838 aa18.58■□□□□ 0.56
CLSTN3-216ENST00000545663 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.58■□□□□ 0.56
CLSTN3-216ENST00000545663 RIF1Q5UIP0 2472 aaKnown RBP18.58■□□□□ 0.56
CLSTN3-216ENST00000545663 CLUL1Q15846 466 aa18.57■□□□□ 0.56
CLSTN3-216ENST00000545663 TCEAL5Q5H9L2 206 aa18.57■□□□□ 0.56
CLSTN3-216ENST00000545663 IQSEC1Q6DN90 963 aa18.57■□□□□ 0.56
CLSTN3-216ENST00000545663 FBXO22Q8NEZ5 403 aa18.57■□□□□ 0.56
CLSTN3-216ENST00000545663 PABPC5Q96DU9 382 aaKnown RBP18.57■□□□□ 0.56
CLSTN3-216ENST00000545663 MRPL38Q96DV4 380 aaKnown RBP18.57■□□□□ 0.56
CLSTN3-216ENST00000545663 CCDC17Q96LX7 622 aa18.57■□□□□ 0.56
CLSTN3-216ENST00000545663 TRIM67Q6ZTA4 783 aa18.56■□□□□ 0.56
CLSTN3-216ENST00000545663 CHST13Q8NET6 341 aa18.56■□□□□ 0.56
CLSTN3-216ENST00000545663 API5Q9BZZ5 524 aaKnown RBP18.56■□□□□ 0.56
CLSTN3-216ENST00000545663 SLC38A10Q9HBR0 1119 aa18.56■□□□□ 0.56
CLSTN3-216ENST00000545663 FBXO40Q9UH90 709 aa18.56■□□□□ 0.56
CLSTN3-216ENST00000545663 FAM50BQ9Y247 325 aa18.56■□□□□ 0.56
CLSTN3-216ENST00000545663 Q9Y3F1 56 aa18.56■□□□□ 0.56
CLSTN3-216ENST00000545663 CTDP1Q9Y5B0 961 aaPredicted RBP18.56■□□□□ 0.56
CLSTN3-216ENST00000545663 F5H6K3 240 aa18.55■□□□□ 0.56
CLSTN3-216ENST00000545663 NDUFB10O96000 172 aa18.55■□□□□ 0.56
CLSTN3-216ENST00000545663 PDE6AP16499 860 aa18.55■□□□□ 0.56
CLSTN3-216ENST00000545663 LTBRP36941 435 aa18.55■□□□□ 0.56
CLSTN3-216ENST00000545663 KLRC3Q07444 240 aa18.55■□□□□ 0.56
CLSTN3-216ENST00000545663 OS9Q13438 667 aaPredicted RBP18.55■□□□□ 0.56
CLSTN3-216ENST00000545663 KIAA1211Q6ZU35 1233 aa18.55■□□□□ 0.56
CLSTN3-216ENST00000545663 ASCL5Q7RTU5 278 aa18.55■□□□□ 0.56
CLSTN3-216ENST00000545663 BANK1Q8NDB2 785 aa18.55■□□□□ 0.56
CLSTN3-216ENST00000545663 ATOH1Q92858 354 aaPredicted RBP18.55■□□□□ 0.56
CLSTN3-216ENST00000545663 PURBQ96QR8 312 aaKnown RBP18.55■□□□□ 0.56
CLSTN3-216ENST00000545663 CRBNQ96SW2 442 aa18.55■□□□□ 0.56
CLSTN3-216ENST00000545663 ARMT1Q9H993 441 aa18.55■□□□□ 0.56
CLSTN3-216ENST00000545663 A1CFQ9NQ94 594 aaKnown RBP18.55■□□□□ 0.56
CLSTN3-216ENST00000545663 CLDND1Q9NY35 253 aa18.55■□□□□ 0.56
CLSTN3-216ENST00000545663 ASB14A6NK59 587 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms