RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 ARFGAP3Q9NP61 516 aa26.11■■□□□ 1.77
FOXA1-202ENST00000545425 MAGEC2Q9UBF1 373 aaPredicted RBP26.11■■□□□ 1.77
FOXA1-202ENST00000545425 ESYT2A0FGR8 921 aa26.11■■□□□ 1.77
FOXA1-202ENST00000545425 AMPD3Q01432 767 aa26.11■■□□□ 1.77
FOXA1-202ENST00000545425 GIMAP8Q8ND71 665 aaPredicted RBP26.11■■□□□ 1.77
FOXA1-202ENST00000545425 ZNF622Q969S3 477 aaKnown RBP eCLIP26.11■■□□□ 1.77
FOXA1-202ENST00000545425 C6orf50Q9HD87 102 aa26.11■■□□□ 1.77
FOXA1-202ENST00000545425 FAM205AQ6ZU69 1335 aa26.1■■□□□ 1.77
FOXA1-202ENST00000545425 PRCPP42785 496 aa26.1■■□□□ 1.77
FOXA1-202ENST00000545425 FXR1P51114 621 aaKnown RBP eCLIP26.1■■□□□ 1.77
FOXA1-202ENST00000545425 KARSQ15046 597 aaKnown RBP26.1■■□□□ 1.77
FOXA1-202ENST00000545425 TSR1Q2NL82 804 aaKnown RBP26.1■■□□□ 1.77
FOXA1-202ENST00000545425 HNRNPLLQ8WVV9 542 aaKnown RBP26.1■■□□□ 1.77
FOXA1-202ENST00000545425 NUP88Q99567 741 aaPredicted RBP26.1■■□□□ 1.77
FOXA1-202ENST00000545425 BRCA1P38398 1863 aaKnown RBP26.1■■□□□ 1.77
FOXA1-202ENST00000545425 TNRC6CQ9HCJ0 1690 aaKnown RBP26.1■■□□□ 1.77
FOXA1-202ENST00000545425 PARP1P09874 1014 aaKnown RBP26.09■■□□□ 1.77
FOXA1-202ENST00000545425 DNM2P50570 870 aa26.09■■□□□ 1.77
FOXA1-202ENST00000545425 CC2D1AQ6P1N0 951 aaPredicted RBP26.09■■□□□ 1.77
FOXA1-202ENST00000545425 NEDD1Q8NHV4 660 aa26.09■■□□□ 1.77
FOXA1-202ENST00000545425 SH3RF3Q8TEJ3 882 aaPredicted RBP26.09■■□□□ 1.77
FOXA1-202ENST00000545425 FAM163AQ96GL9 167 aaPredicted RBP26.09■■□□□ 1.77
FOXA1-202ENST00000545425 ANKIB1Q9P2G1 1089 aa26.09■■□□□ 1.77
FOXA1-202ENST00000545425 SRGNP10124 158 aa26.09■■□□□ 1.77
FOXA1-202ENST00000545425 CHMP4BP1P59074 171 aa26.09■■□□□ 1.77
FOXA1-202ENST00000545425 MTF1Q14872 753 aa26.09■■□□□ 1.77
FOXA1-202ENST00000545425 TEX35Q5T0J7 233 aa26.09■■□□□ 1.77
FOXA1-202ENST00000545425 STYK1Q6J9G0 422 aa26.09■■□□□ 1.77
FOXA1-202ENST00000545425 C16orf86Q6ZW13 317 aa26.09■■□□□ 1.77
FOXA1-202ENST00000545425 ZNF771Q7L3S4 317 aaPredicted RBP26.09■■□□□ 1.77
FOXA1-202ENST00000545425 OR8K1Q8NGG5 319 aa26.09■■□□□ 1.77
FOXA1-202ENST00000545425 RASSF8Q8NHQ8 419 aa26.09■■□□□ 1.77
FOXA1-202ENST00000545425 CPLX3Q8WVH0 158 aa26.09■■□□□ 1.77
FOXA1-202ENST00000545425 CNKSR1Q969H4 720 aa26.09■■□□□ 1.77
FOXA1-202ENST00000545425 TMEM47Q9BQJ4 181 aa26.09■■□□□ 1.77
FOXA1-202ENST00000545425 DDX60LQ5H9U9 1706 aaKnown RBP26.08■■□□□ 1.77
FOXA1-202ENST00000545425 KLRG2A4D1S0 409 aaPredicted RBP26.08■■□□□ 1.77
FOXA1-202ENST00000545425 ATP2B4P23634 1241 aa26.08■■□□□ 1.77
FOXA1-202ENST00000545425 CCT6AP40227 531 aaKnown RBP26.08■■□□□ 1.77
FOXA1-202ENST00000545425 NOVP48745 357 aa26.08■■□□□ 1.77
FOXA1-202ENST00000545425 NONOQ15233 471 aaKnown RBP eCLIP26.08■■□□□ 1.77
FOXA1-202ENST00000545425 NAALADL2Q58DX5 795 aa26.08■■□□□ 1.77
FOXA1-202ENST00000545425 MASTLQ96GX5 879 aa26.08■■□□□ 1.77
FOXA1-202ENST00000545425 NAPGQ99747 312 aaPredicted RBP26.08■■□□□ 1.77
FOXA1-202ENST00000545425 OR52Z1P0C646 297 aa26.07■■□□□ 1.76
FOXA1-202ENST00000545425 RASA1P20936 1047 aa26.07■■□□□ 1.76
FOXA1-202ENST00000545425 KRT9P35527 623 aa26.07■■□□□ 1.76
FOXA1-202ENST00000545425 UBXN1Q04323 297 aa26.07■■□□□ 1.76
FOXA1-202ENST00000545425 HEATR3Q7Z4Q2 680 aa26.07■■□□□ 1.76
FOXA1-202ENST00000545425 STAG2Q8N3U4 1231 aa26.07■■□□□ 1.76
FOXA1-202ENST00000545425 MB21D1Q8N884 522 aa26.07■■□□□ 1.76
FOXA1-202ENST00000545425 EHBP1Q8NDI1 1231 aa26.07■■□□□ 1.76
FOXA1-202ENST00000545425 GPKOWQ92917 476 aaPredicted RBP eCLIP26.07■■□□□ 1.76
FOXA1-202ENST00000545425 DNAJC7Q99615 494 aa26.07■■□□□ 1.76
FOXA1-202ENST00000545425 C7orf25Q9BPX7 421 aa26.07■■□□□ 1.76
FOXA1-202ENST00000545425 VPS16Q9H269 839 aa26.07■■□□□ 1.76
FOXA1-202ENST00000545425 TAB2Q9NYJ8 693 aa26.07■■□□□ 1.76
FOXA1-202ENST00000545425 GPR75-ASB3A0A0A6YYF3 556 aa26.07■■□□□ 1.76
FOXA1-202ENST00000545425 KLRC4O43908 158 aa26.07■■□□□ 1.76
FOXA1-202ENST00000545425 TXNRD3Q86VQ6 643 aa26.07■■□□□ 1.76
FOXA1-202ENST00000545425 STAMQ92783 540 aa26.07■■□□□ 1.76
FOXA1-202ENST00000545425 UBXN6Q9BZV1 441 aa26.07■■□□□ 1.76
FOXA1-202ENST00000545425 HAUS4Q9H6D7 363 aa26.07■■□□□ 1.76
FOXA1-202ENST00000545425 LZTFL1Q9NQ48 299 aa26.07■■□□□ 1.76
FOXA1-202ENST00000545425 CAPN11Q9UMQ6 739 aa26.07■■□□□ 1.76
FOXA1-202ENST00000545425 ZNF569Q5MCW4 686 aa26.06■■□□□ 1.76
FOXA1-202ENST00000545425 MSANTD4Q8NCY6 345 aa26.06■■□□□ 1.76
FOXA1-202ENST00000545425 TBC1D22AQ8WUA7 517 aa26.06■■□□□ 1.76
FOXA1-202ENST00000545425 RRP36Q96EU6 259 aaKnown RBP26.06■■□□□ 1.76
FOXA1-202ENST00000545425 RTFDC1Q9BY42 306 aaPredicted RBP26.06■■□□□ 1.76
FOXA1-202ENST00000545425 GBP3Q9H0R5 595 aa26.06■■□□□ 1.76
FOXA1-202ENST00000545425 LUC7L2Q9Y383 392 aaKnown RBP26.06■■□□□ 1.76
FOXA1-202ENST00000545425 KLRF2D3W0D1 207 aa26.05■■□□□ 1.76
FOXA1-202ENST00000545425 ERLIN1O75477 346 aa26.05■■□□□ 1.76
FOXA1-202ENST00000545425 EVX2Q03828 476 aa26.05■■□□□ 1.76
FOXA1-202ENST00000545425 KIF4BQ2VIQ3 1234 aa26.05■■□□□ 1.76
FOXA1-202ENST00000545425 SOGA3Q5TF21 947 aa26.05■■□□□ 1.76
FOXA1-202ENST00000545425 ZNF507Q8TCN5 953 aa26.05■■□□□ 1.76
FOXA1-202ENST00000545425 RAB21Q9UL25 225 aa26.05■■□□□ 1.76
FOXA1-202ENST00000545425 ARFGEF1Q9Y6D6 1849 aa26.05■■□□□ 1.76
FOXA1-202ENST00000545425 PLIN4Q96Q06 1357 aa26.05■■□□□ 1.76
FOXA1-202ENST00000545425 IL1R1P14778 569 aa26.04■■□□□ 1.76
FOXA1-202ENST00000545425 VEGFAP15692 232 aaPredicted RBP26.04■■□□□ 1.76
FOXA1-202ENST00000545425 NPR1P16066 1061 aa26.04■■□□□ 1.76
FOXA1-202ENST00000545425 CCNE1P24864 410 aa26.04■■□□□ 1.76
FOXA1-202ENST00000545425 PLA2G4AP47712 749 aa26.04■■□□□ 1.76
FOXA1-202ENST00000545425 ERVK-24P63145 666 aa26.04■■□□□ 1.76
FOXA1-202ENST00000545425 KRT83P78385 493 aa26.04■■□□□ 1.76
FOXA1-202ENST00000545425 INF2Q27J81 1249 aa26.04■■□□□ 1.76
FOXA1-202ENST00000545425 FIGNQ5HY92 759 aa26.04■■□□□ 1.76
FOXA1-202ENST00000545425 FOXR2Q6PJQ5 311 aa26.04■■□□□ 1.76
FOXA1-202ENST00000545425 CABP7Q86V35 215 aa26.04■■□□□ 1.76
FOXA1-202ENST00000545425 PARD6BQ9BYG5 372 aa26.04■■□□□ 1.76
FOXA1-202ENST00000545425 SEC63Q9UGP8 760 aaKnown RBP26.04■■□□□ 1.76
FOXA1-202ENST00000545425 GDAQ9Y2T3 454 aa26.04■■□□□ 1.76
FOXA1-202ENST00000545425 CCDC66A2RUB6 948 aa26.04■■□□□ 1.76
FOXA1-202ENST00000545425 CYTH3O43739 400 aa26.04■■□□□ 1.76
FOXA1-202ENST00000545425 TYW1BQ6NUM6 668 aa26.04■■□□□ 1.76
FOXA1-202ENST00000545425 TTI2Q6NXR4 508 aa26.04■■□□□ 1.76
FOXA1-202ENST00000545425 NEK8Q86SG6 692 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms