RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 TSR1Q2NL82 804 aaKnown RBP13.99□□□□□ -0.17
PAAF1-215ENST00000544909 USP17L1Q7RTZ2 530 aa13.99□□□□□ -0.17
PAAF1-215ENST00000544909 RASSF8Q8NHQ8 419 aa13.99□□□□□ -0.17
PAAF1-215ENST00000544909 TRIM9Q9C026 710 aa13.99□□□□□ -0.17
PAAF1-215ENST00000544909 MRPL44Q9H9J2 332 aaKnown RBP13.99□□□□□ -0.17
PAAF1-215ENST00000544909 ZNF446Q9NWS9 450 aa13.99□□□□□ -0.17
PAAF1-215ENST00000544909 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.99□□□□□ -0.17
PAAF1-215ENST00000544909 USP21Q9UK80 565 aa13.99□□□□□ -0.17
PAAF1-215ENST00000544909 CAPN11Q9UMQ6 739 aa13.99□□□□□ -0.17
PAAF1-215ENST00000544909 FHOD1Q9Y613 1164 aa13.99□□□□□ -0.17
PAAF1-215ENST00000544909 V9GYY5 206 aaPredicted RBP13.99□□□□□ -0.17
PAAF1-215ENST00000544909 BAZ2BQ9UIF8 2168 aaKnown RBP13.98□□□□□ -0.17
PAAF1-215ENST00000544909 A0A1W2PQJ5 194 aa13.98□□□□□ -0.17
PAAF1-215ENST00000544909 PNMA6AP0CW24 399 aaPredicted RBP13.98□□□□□ -0.17
PAAF1-215ENST00000544909 CASP1P29466 404 aa13.98□□□□□ -0.17
PAAF1-215ENST00000544909 SEPT2Q15019 361 aa13.98□□□□□ -0.17
PAAF1-215ENST00000544909 CABP7Q86V35 215 aa13.98□□□□□ -0.17
PAAF1-215ENST00000544909 IRF2BP1Q8IU81 584 aa13.98□□□□□ -0.17
PAAF1-215ENST00000544909 TEX2Q8IWB9 1127 aa13.98□□□□□ -0.17
PAAF1-215ENST00000544909 ZSCAN29Q8IWY8 852 aaPredicted RBP13.98□□□□□ -0.17
PAAF1-215ENST00000544909 CCDC170Q8IYT3 715 aa13.98□□□□□ -0.17
PAAF1-215ENST00000544909 MB21D1Q8N884 522 aa13.98□□□□□ -0.17
PAAF1-215ENST00000544909 CALML4Q96GE6 196 aa13.98□□□□□ -0.17
PAAF1-215ENST00000544909 NUP88Q99567 741 aaPredicted RBP13.98□□□□□ -0.17
PAAF1-215ENST00000544909 TMEM60Q9H2L4 133 aa13.98□□□□□ -0.17
PAAF1-215ENST00000544909 HAUS4Q9H6D7 363 aa13.98□□□□□ -0.17
PAAF1-215ENST00000544909 LUC7L2Q9Y383 392 aaKnown RBP13.98□□□□□ -0.17
PAAF1-215ENST00000544909 SMCO2A6NFE2 343 aa13.97□□□□□ -0.17
PAAF1-215ENST00000544909 FGFR1OPO95684 399 aaKnown RBP13.97□□□□□ -0.17
PAAF1-215ENST00000544909 SRGNP10124 158 aa13.97□□□□□ -0.17
PAAF1-215ENST00000544909 KRT9P35527 623 aa13.97□□□□□ -0.17
PAAF1-215ENST00000544909 KRT83P78385 493 aa13.97□□□□□ -0.17
PAAF1-215ENST00000544909 GPSM2P81274 684 aa13.97□□□□□ -0.17
PAAF1-215ENST00000544909 UBXN1Q04323 297 aa13.97□□□□□ -0.17
PAAF1-215ENST00000544909 GABPAQ06546 454 aa13.97□□□□□ -0.17
PAAF1-215ENST00000544909 ARID3AQ99856 593 aa13.97□□□□□ -0.17
PAAF1-215ENST00000544909 EXOC1Q9NV70 894 aa13.97□□□□□ -0.17
PAAF1-215ENST00000544909 ZNHIT6Q9NWK9 470 aaKnown RBP13.97□□□□□ -0.17
PAAF1-215ENST00000544909 GCFC2P16383 781 aaKnown RBP13.97□□□□□ -0.17
PAAF1-215ENST00000544909 CCT6AP40227 531 aaKnown RBP13.97□□□□□ -0.17
PAAF1-215ENST00000544909 KCNQ4P56696 695 aa13.97□□□□□ -0.17
PAAF1-215ENST00000544909 CHMP4BP1P59074 171 aa13.97□□□□□ -0.17
PAAF1-215ENST00000544909 TMEM266Q2M3C6 531 aa13.97□□□□□ -0.17
PAAF1-215ENST00000544909 MFSD14BQ5SR56 506 aa13.97□□□□□ -0.17
PAAF1-215ENST00000544909 FAM196AQ6ZSG2 479 aa13.97□□□□□ -0.17
PAAF1-215ENST00000544909 MAPKAPK5Q8IW41 473 aa13.97□□□□□ -0.17
PAAF1-215ENST00000544909 RPGRIP1Q96KN7 1286 aa13.97□□□□□ -0.17
PAAF1-215ENST00000544909 TRIM47Q96LD4 638 aa13.97□□□□□ -0.17
PAAF1-215ENST00000544909 ERGIC2Q96RQ1 377 aa13.97□□□□□ -0.17
PAAF1-215ENST00000544909 NAPGQ99747 312 aaPredicted RBP13.97□□□□□ -0.17
PAAF1-215ENST00000544909 DESI2Q9BSY9 194 aa13.97□□□□□ -0.17
PAAF1-215ENST00000544909 COA1Q9GZY4 146 aa13.97□□□□□ -0.17
PAAF1-215ENST00000544909 ARFGAP3Q9NP61 516 aa13.97□□□□□ -0.17
PAAF1-215ENST00000544909 PRDM4Q9UKN5 801 aa13.97□□□□□ -0.17
PAAF1-215ENST00000544909 IGKV6D-41A0A0C4DH26 115 aa13.96□□□□□ -0.17
PAAF1-215ENST00000544909 PLCG1P19174 1290 aa13.96□□□□□ -0.17
PAAF1-215ENST00000544909 GPATCH4Q5T3I0 446 aaKnown RBP13.96□□□□□ -0.17
PAAF1-215ENST00000544909 PPP4R3AQ6IN85 833 aa13.96□□□□□ -0.17
PAAF1-215ENST00000544909 MSANTD4Q8NCY6 345 aa13.96□□□□□ -0.17
PAAF1-215ENST00000544909 P2RX5Q93086 422 aa13.96□□□□□ -0.17
PAAF1-215ENST00000544909 CEP95Q96GE4 821 aa13.96□□□□□ -0.17
PAAF1-215ENST00000544909 MTMR9Q96QG7 549 aa13.96□□□□□ -0.17
PAAF1-215ENST00000544909 TTYH3Q9C0H2 523 aa13.96□□□□□ -0.17
PAAF1-215ENST00000544909 MTMR4Q9NYA4 1195 aa13.96□□□□□ -0.17
PAAF1-215ENST00000544909 RAB21Q9UL25 225 aa13.96□□□□□ -0.17
PAAF1-215ENST00000544909 GDAQ9Y2T3 454 aa13.96□□□□□ -0.17
PAAF1-215ENST00000544909 PSMD14O00487 310 aa13.95□□□□□ -0.18
PAAF1-215ENST00000544909 NDUFA10O95299 355 aa13.95□□□□□ -0.18
PAAF1-215ENST00000544909 PDHBP11177 359 aa13.95□□□□□ -0.18
PAAF1-215ENST00000544909 GYS1P13807 737 aa13.95□□□□□ -0.18
PAAF1-215ENST00000544909 ERVK-24P63145 666 aa13.95□□□□□ -0.18
PAAF1-215ENST00000544909 LRRC63Q05C16 580 aa13.95□□□□□ -0.18
PAAF1-215ENST00000544909 PSMD2Q13200 908 aa13.95□□□□□ -0.18
PAAF1-215ENST00000544909 MTF1Q14872 753 aa13.95□□□□□ -0.18
PAAF1-215ENST00000544909 TERF2Q15554 542 aa13.95□□□□□ -0.18
PAAF1-215ENST00000544909 TXNRD1Q16881 649 aa13.95□□□□□ -0.18
PAAF1-215ENST00000544909 MCTP2Q6DN12 878 aa13.95□□□□□ -0.18
PAAF1-215ENST00000544909 CC2D1AQ6P1N0 951 aaPredicted RBP13.95□□□□□ -0.18
PAAF1-215ENST00000544909 PTF1AQ7RTS3 328 aa13.95□□□□□ -0.18
PAAF1-215ENST00000544909 AMIGO3Q86WK7 504 aa13.95□□□□□ -0.18
PAAF1-215ENST00000544909 SP8Q8IXZ3 490 aa13.95□□□□□ -0.18
PAAF1-215ENST00000544909 CSGALNACT2Q8N6G5 542 aa13.95□□□□□ -0.18
PAAF1-215ENST00000544909 TBC1D16Q8TBP0 767 aa13.95□□□□□ -0.18
PAAF1-215ENST00000544909 RASGRP4Q8TDF6 673 aa13.95□□□□□ -0.18
PAAF1-215ENST00000544909 STAMQ92783 540 aa13.95□□□□□ -0.18
PAAF1-215ENST00000544909 UBXN6Q9BZV1 441 aa13.95□□□□□ -0.18
PAAF1-215ENST00000544909 GBP3Q9H0R5 595 aa13.95□□□□□ -0.18
PAAF1-215ENST00000544909 VPS16Q9H269 839 aa13.95□□□□□ -0.18
PAAF1-215ENST00000544909 TAB2Q9NYJ8 693 aa13.95□□□□□ -0.18
PAAF1-215ENST00000544909 EPN1Q9Y6I3 576 aaPredicted RBP13.95□□□□□ -0.18
PAAF1-215ENST00000544909 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.94□□□□□ -0.18
PAAF1-215ENST00000544909 CCNT1O60563 726 aaKnown RBP13.94□□□□□ -0.18
PAAF1-215ENST00000544909 ERLIN1O75477 346 aa13.94□□□□□ -0.18
PAAF1-215ENST00000544909 HNRNPH3P31942 346 aaKnown RBP13.94□□□□□ -0.18
PAAF1-215ENST00000544909 CYLC1P35663 651 aaPredicted RBP13.94□□□□□ -0.18
PAAF1-215ENST00000544909 ZBED6P86452 979 aa13.94□□□□□ -0.18
PAAF1-215ENST00000544909 TAF3Q5VWG9 929 aa13.94□□□□□ -0.18
PAAF1-215ENST00000544909 CENPPQ6IPU0 288 aa13.94□□□□□ -0.18
PAAF1-215ENST00000544909 GUF1Q8N442 669 aaKnown RBP13.94□□□□□ -0.18
PAAF1-215ENST00000544909 SLC44A5Q8NCS7 719 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms