RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	COPS5	Q92905	334 aa		6.35	□□□□□ -1.39
RAP1B-231	ENST00000544639	FCRL2	Q96LA5	508 aa	Predicted RBP	6.35	□□□□□ -1.39
RAP1B-231	ENST00000544639	RNPC3	Q96LT9	517 aa	Known RBP	6.35	□□□□□ -1.39
RAP1B-231	ENST00000544639	MBNL3	Q9NUK0	354 aa	Known RBP	6.35	□□□□□ -1.39
RAP1B-231	ENST00000544639	TMEM59L	Q9UK28	342 aa		6.35	□□□□□ -1.39
RAP1B-231	ENST00000544639	TBX22	Q9Y458	520 aa		6.35	□□□□□ -1.39
RAP1B-231	ENST00000544639	C2orf71	A6NGG8	1288 aa		6.34	□□□□□ -1.39
RAP1B-231	ENST00000544639	SNRPB2	P08579	225 aa	Known RBP	6.34	□□□□□ -1.39
RAP1B-231	ENST00000544639	SF1	Q15637	639 aa	Known RBP	6.34	□□□□□ -1.39
RAP1B-231	ENST00000544639	FOXB2	Q5VYV0	432 aa		6.34	□□□□□ -1.39
RAP1B-231	ENST00000544639	EEF1DP3	Q658K8	133 aa		6.34	□□□□□ -1.39
RAP1B-231	ENST00000544639	PI4K2B	Q8TCG2	481 aa		6.34	□□□□□ -1.39
RAP1B-231	ENST00000544639	LINC01599	Q8WXQ3	324 aa		6.34	□□□□□ -1.39
RAP1B-231	ENST00000544639	OSBP2	Q969R2	916 aa		6.34	□□□□□ -1.39
RAP1B-231	ENST00000544639	C1orf159	Q96HA4	380 aa		6.34	□□□□□ -1.39
RAP1B-231	ENST00000544639	CCDC140	Q96MF4	163 aa		6.34	□□□□□ -1.39
RAP1B-231	ENST00000544639	IER2	Q9BTL4	223 aa		6.34	□□□□□ -1.39
RAP1B-231	ENST00000544639	ADAMTS10	Q9H324	1103 aa		6.34	□□□□□ -1.39
RAP1B-231	ENST00000544639	KANSL2	Q9H9L4	492 aa		6.34	□□□□□ -1.39
RAP1B-231	ENST00000544639	ERVK13-1	Q9NX77	482 aa		6.34	□□□□□ -1.39
RAP1B-231	ENST00000544639	EBF1	Q9UH73	591 aa		6.34	□□□□□ -1.39
RAP1B-231	ENST00000544639	PTCH2	Q9Y6C5	1203 aa		6.34	□□□□□ -1.39
RAP1B-231	ENST00000544639	MRPL42	Q9Y6G3	142 aa	Known RBP	6.34	□□□□□ -1.39
RAP1B-231	ENST00000544639	PRODH	O43272	600 aa		6.33	□□□□□ -1.4
RAP1B-231	ENST00000544639	DLX3	O60479	287 aa		6.33	□□□□□ -1.4
RAP1B-231	ENST00000544639	CP	P00450	1065 aa		6.33	□□□□□ -1.4
RAP1B-231	ENST00000544639	THBD	P07204	575 aa		6.33	□□□□□ -1.4
RAP1B-231	ENST00000544639	RNASE1	P07998	156 aa	Known RBP	6.33	□□□□□ -1.4
RAP1B-231	ENST00000544639	PABPC1	P11940	636 aa	Known RBP	6.33	□□□□□ -1.4
RAP1B-231	ENST00000544639	CEBPA	P49715	358 aa	Predicted RBP	6.33	□□□□□ -1.4
RAP1B-231	ENST00000544639	SEPHS1	P49903	392 aa		6.33	□□□□□ -1.4
RAP1B-231	ENST00000544639	MAP4K2	Q12851	820 aa		6.33	□□□□□ -1.4
RAP1B-231	ENST00000544639	DUSP4	Q13115	394 aa		6.33	□□□□□ -1.4
RAP1B-231	ENST00000544639	SQSTM1	Q13501	440 aa		6.33	□□□□□ -1.4
RAP1B-231	ENST00000544639	TMEM67	Q5HYA8	995 aa		6.33	□□□□□ -1.4
RAP1B-231	ENST00000544639	ZC3H12B	Q5HYM0	836 aa	Known RBP	6.33	□□□□□ -1.4
RAP1B-231	ENST00000544639	LCE1D	Q5T752	114 aa		6.33	□□□□□ -1.4
RAP1B-231	ENST00000544639	KSR1	Q8IVT5	923 aa		6.33	□□□□□ -1.4
RAP1B-231	ENST00000544639	TMEM145	Q8NBT3	493 aa		6.33	□□□□□ -1.4
RAP1B-231	ENST00000544639	ZSWIM2	Q8NEG5	633 aa		6.33	□□□□□ -1.4
RAP1B-231	ENST00000544639	NPLOC4	Q8TAT6	608 aa		6.33	□□□□□ -1.4
RAP1B-231	ENST00000544639	SYTL4	Q96C24	671 aa	Predicted RBP	6.33	□□□□□ -1.4
RAP1B-231	ENST00000544639	CCDC120	Q96HB5	630 aa		6.33	□□□□□ -1.4
RAP1B-231	ENST00000544639	MAP6	Q96JE9	813 aa		6.33	□□□□□ -1.4
RAP1B-231	ENST00000544639	EXOC2	Q96KP1	924 aa		6.33	□□□□□ -1.4
RAP1B-231	ENST00000544639	PTCHD1	Q96NR3	888 aa		6.33	□□□□□ -1.4
RAP1B-231	ENST00000544639	CWC22	Q9HCG8	908 aa	Known RBP	6.33	□□□□□ -1.4
RAP1B-231	ENST00000544639	C19orf73	Q9NVV2	129 aa		6.33	□□□□□ -1.4
RAP1B-231	ENST00000544639	ECI1	P42126	302 aa		6.32	□□□□□ -1.4
RAP1B-231	ENST00000544639	KCNJ6	P48051	423 aa		6.32	□□□□□ -1.4
RAP1B-231	ENST00000544639	PRSS53	Q2L4Q9	553 aa		6.32	□□□□□ -1.4
RAP1B-231	ENST00000544639	SLC35F1	Q5T1Q4	408 aa		6.32	□□□□□ -1.4
RAP1B-231	ENST00000544639	CYP2R1	Q6VVX0	501 aa		6.32	□□□□□ -1.4
RAP1B-231	ENST00000544639	NSMF	Q6X4W1	530 aa		6.32	□□□□□ -1.4
RAP1B-231	ENST00000544639	NLGN1	Q8N2Q7	840 aa		6.32	□□□□□ -1.4
RAP1B-231	ENST00000544639	KREMEN2	Q8NCW0	462 aa		6.32	□□□□□ -1.4
RAP1B-231	ENST00000544639	TMEM52	Q8NDY8	209 aa		6.32	□□□□□ -1.4
RAP1B-231	ENST00000544639	FRS2	Q8WU20	508 aa		6.32	□□□□□ -1.4
RAP1B-231	ENST00000544639	KCTD13	Q8WZ19	329 aa		6.32	□□□□□ -1.4
RAP1B-231	ENST00000544639	HHIPL1	Q96JK4	782 aa		6.32	□□□□□ -1.4
RAP1B-231	ENST00000544639	SLC26A8	Q96RN1	970 aa		6.32	□□□□□ -1.4
RAP1B-231	ENST00000544639	TMEM260	Q9NX78	707 aa		6.32	□□□□□ -1.4
RAP1B-231	ENST00000544639	TMA7	Q9Y2S6	64 aa	Known RBP	6.32	□□□□□ -1.4
RAP1B-231	ENST00000544639	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	6.32	□□□□□ -1.4
RAP1B-231	ENST00000544639	CARMIL2	Q6F5E8	1435 aa		6.32	□□□□□ -1.4
RAP1B-231	ENST00000544639	TRBV23-1	A0A0A0MS06	115 aa		6.31	□□□□□ -1.4
RAP1B-231	ENST00000544639	TLDC2	A0PJX2	215 aa		6.31	□□□□□ -1.4
RAP1B-231	ENST00000544639	FAM209A	Q5JX71	171 aa		6.31	□□□□□ -1.4
RAP1B-231	ENST00000544639	ACBD5	Q5T8D3	534 aa	Predicted RBP	6.31	□□□□□ -1.4
RAP1B-231	ENST00000544639	DENND5A	Q6IQ26	1287 aa		6.31	□□□□□ -1.4
RAP1B-231	ENST00000544639	SCUBE1	Q8IWY4	988 aa		6.31	□□□□□ -1.4
RAP1B-231	ENST00000544639	NAT16	Q8N8M0	369 aa		6.31	□□□□□ -1.4
RAP1B-231	ENST00000544639	ANKS4B	Q8N8V4	417 aa		6.31	□□□□□ -1.4
RAP1B-231	ENST00000544639	PDZD8	Q8NEN9	1154 aa		6.31	□□□□□ -1.4
RAP1B-231	ENST00000544639	KISS1R	Q969F8	398 aa	Predicted RBP	6.31	□□□□□ -1.4
RAP1B-231	ENST00000544639	CDC6	Q99741	560 aa		6.31	□□□□□ -1.4
RAP1B-231	ENST00000544639	RC3H2	Q9HBD1	1191 aa	Known RBP	6.31	□□□□□ -1.4
RAP1B-231	ENST00000544639	GPRC5C	Q9NQ84	441 aa		6.31	□□□□□ -1.4
RAP1B-231	ENST00000544639	TNFRSF10D	Q9UBN6	386 aa		6.31	□□□□□ -1.4
RAP1B-231	ENST00000544639	ESYT3	A0FGR9	886 aa		6.3	□□□□□ -1.4
RAP1B-231	ENST00000544639	FADS2P1	A8MWK0	482 aa		6.3	□□□□□ -1.4
RAP1B-231	ENST00000544639	USP2	O75604	605 aa	Predicted RBP	6.3	□□□□□ -1.4
RAP1B-231	ENST00000544639	PLS3	P13797	630 aa		6.3	□□□□□ -1.4
RAP1B-231	ENST00000544639	L1CAM	P32004	1257 aa		6.3	□□□□□ -1.4
RAP1B-231	ENST00000544639	GDNF	P39905	211 aa		6.3	□□□□□ -1.4
RAP1B-231	ENST00000544639	KIR2DL1	P43626	348 aa	Predicted RBP	6.3	□□□□□ -1.4
RAP1B-231	ENST00000544639	KIR2DL2	P43627	348 aa	Predicted RBP	6.3	□□□□□ -1.4
RAP1B-231	ENST00000544639	HK2	P52789	917 aa		6.3	□□□□□ -1.4
RAP1B-231	ENST00000544639	SUMO1	P63165	101 aa	Known RBP	6.3	□□□□□ -1.4
RAP1B-231	ENST00000544639	TESK1	Q15569	626 aa		6.3	□□□□□ -1.4
RAP1B-231	ENST00000544639	E4F1	Q66K89	784 aa	Predicted RBP	6.3	□□□□□ -1.4
RAP1B-231	ENST00000544639	SLCO6A1	Q86UG4	719 aa		6.3	□□□□□ -1.4
RAP1B-231	ENST00000544639	DHRS4	Q9BTZ2	278 aa		6.3	□□□□□ -1.4
RAP1B-231	ENST00000544639	SP110	Q9HB58	689 aa		6.3	□□□□□ -1.4
RAP1B-231	ENST00000544639	CLEC1B	Q9P126	229 aa		6.3	□□□□□ -1.4
RAP1B-231	ENST00000544639	CTNND2	Q9UQB3	1225 aa		6.3	□□□□□ -1.4
RAP1B-231	ENST00000544639	MRPS23	Q9Y3D9	190 aa	Known RBP	6.3	□□□□□ -1.4
RAP1B-231	ENST00000544639	TRBV23OR9-2	A0A075B6M9	112 aa		6.29	□□□□□ -1.4
RAP1B-231	ENST00000544639	TBC1D8	O95759	1140 aa		6.29	□□□□□ -1.4
RAP1B-231	ENST00000544639	HPX	P02790	462 aa		6.29	□□□□□ -1.4

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