RNA–Protein interactions for RNA: ENST00000544513.1

SEMA4D-224, Transcript of semaphorin 4D, humanhuman

TSL 5

Gene SEMA4D, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-224ENST00000544513 PDE1AP54750 535 aa16.42■□□□□ 0.22
SEMA4D-224ENST00000544513 TNFAIP2Q03169 654 aa16.42■□□□□ 0.22
SEMA4D-224ENST00000544513 IKQ13123 557 aaPredicted RBP16.42■□□□□ 0.22
SEMA4D-224ENST00000544513 HDAC1Q13547 482 aaPredicted RBP16.42■□□□□ 0.22
SEMA4D-224ENST00000544513 MUM1L1Q5H9M0 696 aa16.42■□□□□ 0.22
SEMA4D-224ENST00000544513 ANKRD45Q5TZF3 282 aa16.42■□□□□ 0.22
SEMA4D-224ENST00000544513 RASIP1Q5U651 963 aa16.42■□□□□ 0.22
SEMA4D-224ENST00000544513 BTNL9Q6UXG8 535 aa16.42■□□□□ 0.22
SEMA4D-224ENST00000544513 FAM126BQ8IXS8 530 aa16.42■□□□□ 0.22
SEMA4D-224ENST00000544513 MORC4Q8TE76 937 aa16.42■□□□□ 0.22
SEMA4D-224ENST00000544513 DCAF4Q8WV16 495 aa16.42■□□□□ 0.22
SEMA4D-224ENST00000544513 CHMP4CQ96CF2 233 aa16.42■□□□□ 0.22
SEMA4D-224ENST00000544513 ISY1Q9ULR0 285 aaKnown RBP16.42■□□□□ 0.22
SEMA4D-224ENST00000544513 MUC3AQ02505 3323 aa16.42■□□□□ 0.22
SEMA4D-224ENST00000544513 FGAP02671 866 aa16.41■□□□□ 0.22
SEMA4D-224ENST00000544513 ICAM1P05362 532 aa16.41■□□□□ 0.22
SEMA4D-224ENST00000544513 SNAP25P60880 206 aa16.41■□□□□ 0.22
SEMA4D-224ENST00000544513 TAPT1Q6NXT6 567 aa16.41■□□□□ 0.22
SEMA4D-224ENST00000544513 CCDC174Q6PII3 467 aa16.41■□□□□ 0.22
SEMA4D-224ENST00000544513 MAFAQ8NHW3 353 aaPredicted RBP16.41■□□□□ 0.22
SEMA4D-224ENST00000544513 MYLIPQ8WY64 445 aa16.41■□□□□ 0.22
SEMA4D-224ENST00000544513 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.41■□□□□ 0.22
SEMA4D-224ENST00000544513 COL25A1Q9BXS0 654 aaPredicted RBP16.41■□□□□ 0.22
SEMA4D-224ENST00000544513 RANBP17Q9H2T7 1088 aaKnown RBP16.41■□□□□ 0.22
SEMA4D-224ENST00000544513 TCP11L1Q9NUJ3 509 aa16.41■□□□□ 0.22
SEMA4D-224ENST00000544513 DDX49Q9Y6V7 483 aaKnown RBP16.41■□□□□ 0.22
SEMA4D-224ENST00000544513 LRRC37A2A6NM11 1700 aa16.4■□□□□ 0.22
SEMA4D-224ENST00000544513 A0A0D9SFI3 127 aa16.4■□□□□ 0.22
SEMA4D-224ENST00000544513 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.4■□□□□ 0.22
SEMA4D-224ENST00000544513 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.4■□□□□ 0.22
SEMA4D-224ENST00000544513 CABYRO75952 493 aa16.4■□□□□ 0.22
SEMA4D-224ENST00000544513 SMPD1P17405 629 aa16.4■□□□□ 0.22
SEMA4D-224ENST00000544513 BEX3Q00994 111 aa16.4■□□□□ 0.22
SEMA4D-224ENST00000544513 PPIGQ13427 754 aaKnown RBP eCLIP16.4■□□□□ 0.22
SEMA4D-224ENST00000544513 FSCN1Q16658 493 aaKnown RBP16.4■□□□□ 0.22
SEMA4D-224ENST00000544513 TMEM240Q5SV17 173 aa16.4■□□□□ 0.22
SEMA4D-224ENST00000544513 IQSEC1Q6DN90 963 aa16.4■□□□□ 0.22
SEMA4D-224ENST00000544513 TLK2Q86UE8 772 aa16.4■□□□□ 0.22
SEMA4D-224ENST00000544513 VTI1AQ96AJ9 217 aa16.4■□□□□ 0.22
SEMA4D-224ENST00000544513 FAM227BQ96M60 508 aa16.4■□□□□ 0.22
SEMA4D-224ENST00000544513 CCPG1Q9ULG6 757 aa16.4■□□□□ 0.22
SEMA4D-224ENST00000544513 Q9Y3F1 56 aa16.4■□□□□ 0.22
SEMA4D-224ENST00000544513 LCTP09848 1927 aa16.4■□□□□ 0.22
SEMA4D-224ENST00000544513 GRIN2DO15399 1336 aa16.4■□□□□ 0.22
SEMA4D-224ENST00000544513 ZMYM6O95789 1325 aa16.4■□□□□ 0.22
SEMA4D-224ENST00000544513 TOP1P11387 765 aaKnown RBP16.39■□□□□ 0.21
SEMA4D-224ENST00000544513 MCMDC2Q4G0Z9 681 aa16.39■□□□□ 0.21
SEMA4D-224ENST00000544513 TTBK2Q6IQ55 1244 aa16.39■□□□□ 0.21
SEMA4D-224ENST00000544513 CXCL17Q6UXB2 119 aa16.39■□□□□ 0.21
SEMA4D-224ENST00000544513 CRBNQ96SW2 442 aa16.39■□□□□ 0.21
SEMA4D-224ENST00000544513 TMEM47Q9BQJ4 181 aa16.39■□□□□ 0.21
SEMA4D-224ENST00000544513 PDGFCQ9NRA1 345 aa16.39■□□□□ 0.21
SEMA4D-224ENST00000544513 HSPD1P10809 573 aaKnown RBP16.38■□□□□ 0.21
SEMA4D-224ENST00000544513 CSF2RAP15509 400 aa16.38■□□□□ 0.21
SEMA4D-224ENST00000544513 PTGS1P23219 599 aa16.38■□□□□ 0.21
SEMA4D-224ENST00000544513 DNAJB2P25686 324 aa16.38■□□□□ 0.21
SEMA4D-224ENST00000544513 GRIN2CQ14957 1233 aa16.38■□□□□ 0.21
SEMA4D-224ENST00000544513 TMEM63BQ5T3F8 832 aa16.38■□□□□ 0.21
SEMA4D-224ENST00000544513 NOL8Q76FK4 1167 aaKnown RBP16.38■□□□□ 0.21
SEMA4D-224ENST00000544513 TMEM199Q8N511 208 aa16.38■□□□□ 0.21
SEMA4D-224ENST00000544513 PURBQ96QR8 312 aaKnown RBP16.38■□□□□ 0.21
SEMA4D-224ENST00000544513 SEZ6LQ9BYH1 1024 aa16.38■□□□□ 0.21
SEMA4D-224ENST00000544513 VTA1Q9NP79 307 aa16.38■□□□□ 0.21
SEMA4D-224ENST00000544513 ZBTB47Q9UFB7 747 aaPredicted RBP16.38■□□□□ 0.21
SEMA4D-224ENST00000544513 TRANK1O15050 2925 aa16.38■□□□□ 0.21
SEMA4D-224ENST00000544513 LOC102724159A0A0B4J2E5 919 aa16.37■□□□□ 0.21
SEMA4D-224ENST00000544513 TLR3O15455 904 aaKnown RBP16.37■□□□□ 0.21
SEMA4D-224ENST00000544513 DYNC1LI2O43237 492 aaPredicted RBP16.37■□□□□ 0.21
SEMA4D-224ENST00000544513 FOSL2P15408 326 aa16.37■□□□□ 0.21
SEMA4D-224ENST00000544513 SLC16A2P36021 539 aa16.37■□□□□ 0.21
SEMA4D-224ENST00000544513 PWP2Q15269 919 aaKnown RBP16.37■□□□□ 0.21
SEMA4D-224ENST00000544513 CCDC96Q2M329 555 aa16.37■□□□□ 0.21
SEMA4D-224ENST00000544513 SYDE2Q5VT97 1194 aa16.37■□□□□ 0.21
SEMA4D-224ENST00000544513 NSMFQ6X4W1 530 aa16.37■□□□□ 0.21
SEMA4D-224ENST00000544513 ZNF589Q86UQ0 364 aaPredicted RBP16.37■□□□□ 0.21
SEMA4D-224ENST00000544513 FBXO16Q8IX29 292 aaPredicted RBP16.37■□□□□ 0.21
SEMA4D-224ENST00000544513 AP5M1Q9H0R1 490 aa16.37■□□□□ 0.21
SEMA4D-224ENST00000544513 RBM47A0AV96 593 aaKnown RBP16.36■□□□□ 0.21
SEMA4D-224ENST00000544513 NFIBO00712 420 aa16.36■□□□□ 0.21
SEMA4D-224ENST00000544513 SNHG28P0DPA3 235 aa16.36■□□□□ 0.21
SEMA4D-224ENST00000544513 CYP2C18P33260 490 aa16.36■□□□□ 0.21
SEMA4D-224ENST00000544513 NMIQ13287 307 aaPredicted RBP16.36■□□□□ 0.21
SEMA4D-224ENST00000544513 ITGA7Q13683 1181 aa16.36■□□□□ 0.21
SEMA4D-224ENST00000544513 BAATQ14032 418 aaPredicted RBP16.36■□□□□ 0.21
SEMA4D-224ENST00000544513 DUSP28Q4G0W2 176 aa16.36■□□□□ 0.21
SEMA4D-224ENST00000544513 PSRC1Q6PGN9 363 aaPredicted RBP16.36■□□□□ 0.21
SEMA4D-224ENST00000544513 ZNF365Q70YC5 407 aa16.36■□□□□ 0.21
SEMA4D-224ENST00000544513 CLEC4DQ8WXI8 215 aa16.36■□□□□ 0.21
SEMA4D-224ENST00000544513 TIFAQ96CG3 184 aa16.36■□□□□ 0.21
SEMA4D-224ENST00000544513 TTC14Q96N46 770 aa16.36■□□□□ 0.21
SEMA4D-224ENST00000544513 MTMR7Q9Y216 660 aa16.36■□□□□ 0.21
SEMA4D-224ENST00000544513 MYO9BQ13459 2157 aa16.36■□□□□ 0.21
SEMA4D-224ENST00000544513 ZEB2O60315 1214 aa16.35■□□□□ 0.21
SEMA4D-224ENST00000544513 PDHBP11177 359 aa16.35■□□□□ 0.21
SEMA4D-224ENST00000544513 PCP11498 1178 aaKnown RBP16.35■□□□□ 0.21
SEMA4D-224ENST00000544513 EEPD1Q7L9B9 569 aa16.35■□□□□ 0.21
SEMA4D-224ENST00000544513 HERVK_113Q902F9 699 aa16.35■□□□□ 0.21
SEMA4D-224ENST00000544513 NOC4LQ9BVI4 516 aaKnown RBP16.35■□□□□ 0.21
SEMA4D-224ENST00000544513 PPP1R12CQ9BZL4 782 aa16.35■□□□□ 0.21
SEMA4D-224ENST00000544513 ZNF576Q9H609 170 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms