RNA–Protein interactions for RNA: ENST00000543898.5

ABCB1-210, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5 BASIC

Gene ABCB1, Length 4,524 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-210ENST00000543898 USP17L12C9JPN9 530 aa9.5□□□□□ -0.89
ABCB1-210ENST00000543898 USP17L21D6R901 530 aa9.5□□□□□ -0.89
ABCB1-210ENST00000543898 BACH1O14867 736 aa9.5□□□□□ -0.89
ABCB1-210ENST00000543898 EIF3HO15372 352 aaKnown RBP eCLIP9.5□□□□□ -0.89
ABCB1-210ENST00000543898 NEBLO76041 1014 aa9.5□□□□□ -0.89
ABCB1-210ENST00000543898 ECM2O94769 699 aaPredicted RBP9.5□□□□□ -0.89
ABCB1-210ENST00000543898 NR1D1P20393 614 aa9.5□□□□□ -0.89
ABCB1-210ENST00000543898 EEF1GP26641 437 aaKnown RBP9.5□□□□□ -0.89
ABCB1-210ENST00000543898 TXKP42681 527 aa9.5□□□□□ -0.89
ABCB1-210ENST00000543898 KLK7P49862 253 aa9.5□□□□□ -0.89
ABCB1-210ENST00000543898 NAPAP54920 295 aa9.5□□□□□ -0.89
ABCB1-210ENST00000543898 SPATA4Q8NEY3 305 aa9.5□□□□□ -0.89
ABCB1-210ENST00000543898 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.5□□□□□ -0.89
ABCB1-210ENST00000543898 TBC1D7Q9P0N9 293 aa9.5□□□□□ -0.89
ABCB1-210ENST00000543898 LIMA1Q9UHB6 759 aaKnown RBP9.5□□□□□ -0.89
ABCB1-210ENST00000543898 ODF2LQ9ULJ1 636 aa9.5□□□□□ -0.89
ABCB1-210ENST00000543898 PCDHA13Q9Y5I0 950 aa9.5□□□□□ -0.89
ABCB1-210ENST00000543898 SYF2O95926 243 aaKnown RBP9.5□□□□□ -0.89
ABCB1-210ENST00000543898 SEC24CP53992 1094 aa9.5□□□□□ -0.89
ABCB1-210ENST00000543898 NTRK3Q16288 839 aa9.5□□□□□ -0.89
ABCB1-210ENST00000543898 ZBTB38Q8NAP3 1195 aaPredicted RBP9.5□□□□□ -0.89
ABCB1-210ENST00000543898 TTLL11Q8NHH1 800 aa9.5□□□□□ -0.89
ABCB1-210ENST00000543898 ATG3Q9NT62 314 aa9.5□□□□□ -0.89
ABCB1-210ENST00000543898 SEC63Q9UGP8 760 aaKnown RBP9.5□□□□□ -0.89
ABCB1-210ENST00000543898 DMGDHQ9UI17 866 aaKnown RBP9.5□□□□□ -0.89
ABCB1-210ENST00000543898 WDR19Q8NEZ3 1342 aa9.5□□□□□ -0.89
ABCB1-210ENST00000543898 CCNT1O60563 726 aaKnown RBP9.5□□□□□ -0.89
ABCB1-210ENST00000543898 SARSP49591 514 aaKnown RBP9.5□□□□□ -0.89
ABCB1-210ENST00000543898 KRT71Q3SY84 523 aa9.5□□□□□ -0.89
ABCB1-210ENST00000543898 TRAPPC11Q7Z392 1133 aa9.5□□□□□ -0.89
ABCB1-210ENST00000543898 CABP7Q86V35 215 aa9.5□□□□□ -0.89
ABCB1-210ENST00000543898 ARL8AQ96BM9 186 aa9.5□□□□□ -0.89
ABCB1-210ENST00000543898 CLTCQ00610 1675 aaKnown RBP9.49□□□□□ -0.89
ABCB1-210ENST00000543898 A0A087X0B3 334 aa9.49□□□□□ -0.89
ABCB1-210ENST00000543898 RNF225M0QZC1 329 aaPredicted RBP9.49□□□□□ -0.89
ABCB1-210ENST00000543898 KCNK3O14649 394 aa9.49□□□□□ -0.89
ABCB1-210ENST00000543898 PCCAP05165 728 aaPredicted RBP9.49□□□□□ -0.89
ABCB1-210ENST00000543898 SCG2P13521 617 aa9.49□□□□□ -0.89
ABCB1-210ENST00000543898 KIF11P52732 1056 aa9.49□□□□□ -0.89
ABCB1-210ENST00000543898 CTSWP56202 376 aa9.49□□□□□ -0.89
ABCB1-210ENST00000543898 SLC9C1Q4G0N8 1177 aa9.49□□□□□ -0.89
ABCB1-210ENST00000543898 RNF217Q8TC41 542 aa9.49□□□□□ -0.89
ABCB1-210ENST00000543898 HDAC7Q8WUI4 952 aa9.49□□□□□ -0.89
ABCB1-210ENST00000543898 N4BP2L2Q92802 583 aaPredicted RBP9.49□□□□□ -0.89
ABCB1-210ENST00000543898 MCM9Q9NXL9 1143 aa9.49□□□□□ -0.89
ABCB1-210ENST00000543898 STK36Q9NRP7 1315 aa9.49□□□□□ -0.89
ABCB1-210ENST00000543898 VIMP08670 466 aaKnown RBP9.49□□□□□ -0.89
ABCB1-210ENST00000543898 NEFHP12036 1026 aa9.49□□□□□ -0.89
ABCB1-210ENST00000543898 TMEM266Q2M3C6 531 aa9.49□□□□□ -0.89
ABCB1-210ENST00000543898 FNBP4Q8N3X1 1017 aaPredicted RBP9.49□□□□□ -0.89
ABCB1-210ENST00000543898 CEP120Q8N960 986 aa9.49□□□□□ -0.89
ABCB1-210ENST00000543898 MS4A14Q96JA4 679 aa9.49□□□□□ -0.89
ABCB1-210ENST00000543898 TARSL2A2RTX5 802 aaKnown RBP9.49□□□□□ -0.89
ABCB1-210ENST00000543898 PSMD14O00487 310 aa9.49□□□□□ -0.89
ABCB1-210ENST00000543898 TECP42680 631 aa9.49□□□□□ -0.89
ABCB1-210ENST00000543898 RASGRF1Q13972 1273 aa9.49□□□□□ -0.89
ABCB1-210ENST00000543898 PPP1R7Q15435 360 aa9.49□□□□□ -0.89
ABCB1-210ENST00000543898 ALS2CLQ60I27 953 aa9.49□□□□□ -0.89
ABCB1-210ENST00000543898 CCDC170Q8IYT3 715 aa9.49□□□□□ -0.89
ABCB1-210ENST00000543898 BLIDQ8IZY5 108 aa9.49□□□□□ -0.89
ABCB1-210ENST00000543898 PRPF38AQ8NAV1 312 aaKnown RBP9.49□□□□□ -0.89
ABCB1-210ENST00000543898 OSBPL9Q96SU4 736 aa9.49□□□□□ -0.89
ABCB1-210ENST00000543898 A0A1B0GUA9 196 aa9.48□□□□□ -0.89
ABCB1-210ENST00000543898 MYBL2P10244 700 aa9.48□□□□□ -0.89
ABCB1-210ENST00000543898 PPP2R5BQ15173 497 aa9.48□□□□□ -0.89
ABCB1-210ENST00000543898 CNNM4Q6P4Q7 775 aa9.48□□□□□ -0.89
ABCB1-210ENST00000543898 EMBQ6PCB8 327 aa9.48□□□□□ -0.89
ABCB1-210ENST00000543898 SV2BQ7L1I2 683 aa9.48□□□□□ -0.89
ABCB1-210ENST00000543898 CARD10Q9BWT7 1032 aa9.48□□□□□ -0.89
ABCB1-210ENST00000543898 NBPF3Q9H094 633 aa9.48□□□□□ -0.89
ABCB1-210ENST00000543898 VEZTQ9HBM0 779 aa9.48□□□□□ -0.89
ABCB1-210ENST00000543898 GSG1L2A8MUP6 293 aa9.48□□□□□ -0.89
ABCB1-210ENST00000543898 PDE8AO60658 829 aa9.48□□□□□ -0.89
ABCB1-210ENST00000543898 KIAA0753Q2KHM9 967 aa9.48□□□□□ -0.89
ABCB1-210ENST00000543898 CDKAL1Q5VV42 579 aa9.48□□□□□ -0.89
ABCB1-210ENST00000543898 CCDC84Q86UT8 332 aaPredicted RBP9.48□□□□□ -0.89
ABCB1-210ENST00000543898 NBPF5PQ86XG9 351 aaPredicted RBP9.48□□□□□ -0.89
ABCB1-210ENST00000543898 DZIP3Q86Y13 1208 aaKnown RBP9.48□□□□□ -0.89
ABCB1-210ENST00000543898 DZIP1Q86YF9 867 aaKnown RBP9.48□□□□□ -0.89
ABCB1-210ENST00000543898 CACNA2D3Q8IZS8 1091 aa9.48□□□□□ -0.89
ABCB1-210ENST00000543898 ANKS4BQ8N8V4 417 aa9.48□□□□□ -0.89
ABCB1-210ENST00000543898 P2RX5Q93086 422 aa9.48□□□□□ -0.89
ABCB1-210ENST00000543898 UBXN6Q9BZV1 441 aa9.48□□□□□ -0.89
ABCB1-210ENST00000543898 FAM217BQ9NTX9 383 aaPredicted RBP9.48□□□□□ -0.89
ABCB1-210ENST00000543898 APBA1Q02410 837 aa9.48□□□□□ -0.89
ABCB1-210ENST00000543898 RPS6KA1Q15418 735 aa9.48□□□□□ -0.89
ABCB1-210ENST00000543898 NELFCDQ8IXH7 590 aa9.48□□□□□ -0.89
ABCB1-210ENST00000543898 UHMK1Q8TAS1 419 aaKnown RBP9.48□□□□□ -0.89
ABCB1-210ENST00000543898 CRNKL1Q9BZJ0 848 aaKnown RBP9.48□□□□□ -0.89
ABCB1-210ENST00000543898 DPH5Q9H2P9 285 aa9.48□□□□□ -0.89
ABCB1-210ENST00000543898 CD248Q9HCU0 757 aa9.48□□□□□ -0.89
ABCB1-210ENST00000543898 CAPN11Q9UMQ6 739 aa9.48□□□□□ -0.89
ABCB1-210ENST00000543898 PACSIN2Q9UNF0 486 aaPredicted RBP9.48□□□□□ -0.89
ABCB1-210ENST00000543898 RIPOR2Q9Y4F9 1068 aa9.48□□□□□ -0.89
ABCB1-210ENST00000543898 ADAMTS13Q76LX8 1427 aa9.48□□□□□ -0.89
ABCB1-210ENST00000543898 ITIH6Q6UXX5 1313 aa9.48□□□□□ -0.89
ABCB1-210ENST00000543898 TTC36A6NLP5 189 aa9.48□□□□□ -0.89
ABCB1-210ENST00000543898 MEFVO15553 781 aaPredicted RBP9.48□□□□□ -0.89
ABCB1-210ENST00000543898 BUB1BO60566 1050 aaPredicted RBP9.48□□□□□ -0.89
ABCB1-210ENST00000543898 PLEKP08567 350 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms