RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 BRAPQ7Z569 592 aa13.26□□□□□ -0.29
COPS7A-217ENST00000543537 RIOX2Q8IUF8 465 aa13.26□□□□□ -0.29
COPS7A-217ENST00000543537 NSUN7Q8NE18 718 aaKnown RBP13.26□□□□□ -0.29
COPS7A-217ENST00000543537 GMCL1P1Q8NEA9 526 aa13.26□□□□□ -0.29
COPS7A-217ENST00000543537 NPLOC4Q8TAT6 608 aa13.26□□□□□ -0.29
COPS7A-217ENST00000543537 CEP95Q96GE4 821 aa13.26□□□□□ -0.29
COPS7A-217ENST00000543537 ZNF396Q96N95 335 aaPredicted RBP13.26□□□□□ -0.29
COPS7A-217ENST00000543537 ZSCAN10Q96SZ4 725 aaPredicted RBP13.26□□□□□ -0.29
COPS7A-217ENST00000543537 LZTS2Q9BRK4 669 aa13.26□□□□□ -0.29
COPS7A-217ENST00000543537 LY9Q9HBG7 655 aa13.26□□□□□ -0.29
COPS7A-217ENST00000543537 FLRT1Q9NZU1 646 aa13.26□□□□□ -0.29
COPS7A-217ENST00000543537 ZNF214Q9UL59 606 aaPredicted RBP13.26□□□□□ -0.29
COPS7A-217ENST00000543537 MTMR6Q9Y217 621 aa13.26□□□□□ -0.29
COPS7A-217ENST00000543537 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.26□□□□□ -0.29
COPS7A-217ENST00000543537 ZDHHC9Q9Y397 364 aa13.26□□□□□ -0.29
COPS7A-217ENST00000543537 RANBP6O60518 1105 aaKnown RBP13.25□□□□□ -0.29
COPS7A-217ENST00000543537 MSCO60682 206 aa13.25□□□□□ -0.29
COPS7A-217ENST00000543537 TTLL1O95922 423 aa13.25□□□□□ -0.29
COPS7A-217ENST00000543537 IFNAR1P17181 557 aa13.25□□□□□ -0.29
COPS7A-217ENST00000543537 NOVP48745 357 aa13.25□□□□□ -0.29
COPS7A-217ENST00000543537 AKAP17AQ02040 695 aaKnown RBP13.25□□□□□ -0.29
COPS7A-217ENST00000543537 GSE1Q14687 1217 aa13.25□□□□□ -0.29
COPS7A-217ENST00000543537 FAM83BQ5T0W9 1011 aa13.25□□□□□ -0.29
COPS7A-217ENST00000543537 IFIT1BQ5T764 474 aaKnown RBP13.25□□□□□ -0.29
COPS7A-217ENST00000543537 MCTP1Q6DN14 999 aa13.25□□□□□ -0.29
COPS7A-217ENST00000543537 PAWRQ96IZ0 340 aaKnown RBP13.25□□□□□ -0.29
COPS7A-217ENST00000543537 TCEANC2Q96MN5 208 aa13.25□□□□□ -0.29
COPS7A-217ENST00000543537 NBPF3Q9H094 633 aa13.25□□□□□ -0.29
COPS7A-217ENST00000543537 PRO3102Q9H379 93 aa13.25□□□□□ -0.29
COPS7A-217ENST00000543537 FBXO28Q9NVF7 368 aa13.25□□□□□ -0.29
COPS7A-217ENST00000543537 NR2E3Q9Y5X4 410 aa13.25□□□□□ -0.29
COPS7A-217ENST00000543537 DDX49Q9Y6V7 483 aaKnown RBP13.25□□□□□ -0.29
COPS7A-217ENST00000543537 TRIOBPQ9H2D6 2365 aa13.24□□□□□ -0.29
COPS7A-217ENST00000543537 ELP1O95163 1332 aa13.24□□□□□ -0.29
COPS7A-217ENST00000543537 PTPDC1A2A3K4 754 aa13.24□□□□□ -0.29
COPS7A-217ENST00000543537 VPS37CA5D8V6 355 aaPredicted RBP13.24□□□□□ -0.29
COPS7A-217ENST00000543537 TSPY2A6NKD2 308 aa13.24□□□□□ -0.29
COPS7A-217ENST00000543537 COBLO75128 1261 aa13.24□□□□□ -0.29
COPS7A-217ENST00000543537 PRDM1O75626 825 aa13.24□□□□□ -0.29
COPS7A-217ENST00000543537 LARGE1O95461 756 aa13.24□□□□□ -0.29
COPS7A-217ENST00000543537 COL6A1P12109 1028 aa13.24□□□□□ -0.29
COPS7A-217ENST00000543537 CYBAP13498 195 aa13.24□□□□□ -0.29
COPS7A-217ENST00000543537 CCND3P30281 292 aaPredicted RBP13.24□□□□□ -0.29
COPS7A-217ENST00000543537 ATP2B2Q01814 1243 aa13.24□□□□□ -0.29
COPS7A-217ENST00000543537 CTDSPL2Q05D32 466 aa13.24□□□□□ -0.29
COPS7A-217ENST00000543537 SSRP1Q08945 709 aaKnown RBP13.24□□□□□ -0.29
COPS7A-217ENST00000543537 STK3Q13188 491 aa13.24□□□□□ -0.29
COPS7A-217ENST00000543537 SAFBQ15424 915 aaKnown RBP eCLIP13.24□□□□□ -0.29
COPS7A-217ENST00000543537 RRP12Q5JTH9 1297 aaKnown RBP13.24□□□□□ -0.29
COPS7A-217ENST00000543537 WDR78Q5VTH9 848 aa13.24□□□□□ -0.29
COPS7A-217ENST00000543537 PRPF38AQ8NAV1 312 aaKnown RBP13.24□□□□□ -0.29
COPS7A-217ENST00000543537 DPF3Q92784 378 aa13.24□□□□□ -0.29
COPS7A-217ENST00000543537 SLF1Q9BQI6 1058 aa13.24□□□□□ -0.29
COPS7A-217ENST00000543537 SLC5A4Q9NY91 659 aa13.24□□□□□ -0.29
COPS7A-217ENST00000543537 CLIP2Q9UDT6 1046 aa13.24□□□□□ -0.29
COPS7A-217ENST00000543537 NRBP1Q9UHY1 535 aa13.24□□□□□ -0.29
COPS7A-217ENST00000543537 DIS3Q9Y2L1 958 aaKnown RBP13.24□□□□□ -0.29
COPS7A-217ENST00000543537 NEDD4P46934 1319 aa13.23□□□□□ -0.29
COPS7A-217ENST00000543537 GOLGA8AA7E2F4 631 aa13.23□□□□□ -0.29
COPS7A-217ENST00000543537 TSPY3P0CV98 308 aa13.23□□□□□ -0.29
COPS7A-217ENST00000543537 TSPY8P0CW00 308 aa13.23□□□□□ -0.29
COPS7A-217ENST00000543537 FDX1P10109 184 aa13.23□□□□□ -0.29
COPS7A-217ENST00000543537 FCER1AP12319 257 aa13.23□□□□□ -0.29
COPS7A-217ENST00000543537 SMARCA1P28370 1054 aa13.23□□□□□ -0.29
COPS7A-217ENST00000543537 STAT3P40763 770 aa13.23□□□□□ -0.29
COPS7A-217ENST00000543537 UBE2HP62256 183 aa13.23□□□□□ -0.29
COPS7A-217ENST00000543537 RTN1Q16799 776 aa13.23□□□□□ -0.29
COPS7A-217ENST00000543537 CYB5R4Q7L1T6 521 aa13.23□□□□□ -0.29
COPS7A-217ENST00000543537 DPP9Q86TI2 863 aa13.23□□□□□ -0.29
COPS7A-217ENST00000543537 FANCBQ8NB91 859 aa13.23□□□□□ -0.29
COPS7A-217ENST00000543537 CTCFLQ8NI51 663 aaPredicted RBP13.23□□□□□ -0.29
COPS7A-217ENST00000543537 DIS3LQ8TF46 1054 aaKnown RBP13.23□□□□□ -0.29
COPS7A-217ENST00000543537 C8orf76Q96K31 380 aa13.23□□□□□ -0.29
COPS7A-217ENST00000543537 TEX13BQ9BXU2 312 aa13.23□□□□□ -0.29
COPS7A-217ENST00000543537 LRRC2Q9BYS8 371 aa13.23□□□□□ -0.29
COPS7A-217ENST00000543537 ORC3Q9UBD5 711 aaPredicted RBP13.23□□□□□ -0.29
COPS7A-217ENST00000543537 TNKSO95271 1327 aa13.22□□□□□ -0.29
COPS7A-217ENST00000543537 GOLGA6L4A6NEF3 574 aa13.22□□□□□ -0.29
COPS7A-217ENST00000543537 PLA2G6O60733 806 aa13.22□□□□□ -0.29
COPS7A-217ENST00000543537 DEXIO95424 95 aa13.22□□□□□ -0.29
COPS7A-217ENST00000543537 OAZ1P54368 228 aa13.22□□□□□ -0.29
COPS7A-217ENST00000543537 CCT2P78371 535 aaKnown RBP13.22□□□□□ -0.29
COPS7A-217ENST00000543537 TFAP4Q01664 338 aa13.22□□□□□ -0.29
COPS7A-217ENST00000543537 SEC23AQ15436 765 aa13.22□□□□□ -0.29
COPS7A-217ENST00000543537 L1TD1Q5T7N2 865 aaKnown RBP13.22□□□□□ -0.29
COPS7A-217ENST00000543537 NCAPG2Q86XI2 1143 aa13.22□□□□□ -0.29
COPS7A-217ENST00000543537 FBXO18Q8NFZ0 1043 aa13.22□□□□□ -0.29
COPS7A-217ENST00000543537 GMCL1Q96IK5 515 aa13.22□□□□□ -0.29
COPS7A-217ENST00000543537 MAML3Q96JK9 1138 aa13.22□□□□□ -0.29
COPS7A-217ENST00000543537 LARP6Q9BRS8 491 aaKnown RBP13.22□□□□□ -0.29
COPS7A-217ENST00000543537 RNF26Q9BY78 433 aaPredicted RBP13.22□□□□□ -0.29
COPS7A-217ENST00000543537 C11orf49Q9H6J7 331 aa13.22□□□□□ -0.29
COPS7A-217ENST00000543537 SLC38A10Q9HBR0 1119 aa13.22□□□□□ -0.29
COPS7A-217ENST00000543537 DDX20Q9UHI6 824 aaKnown RBP13.22□□□□□ -0.29
COPS7A-217ENST00000543537 FEM1BQ9UK73 627 aa13.22□□□□□ -0.29
COPS7A-217ENST00000543537 BRPF3Q9ULD4 1205 aa13.22□□□□□ -0.29
COPS7A-217ENST00000543537 COLQQ9Y215 455 aaPredicted RBP13.22□□□□□ -0.29
COPS7A-217ENST00000543537 COL11A1P12107 1806 aaPredicted RBP13.22□□□□□ -0.29
COPS7A-217ENST00000543537 MYH4Q9Y623 1939 aa13.21□□□□□ -0.29
COPS7A-217ENST00000543537 PFASO15067 1338 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms