RNA–Protein interactions for RNA: ENST00000543190.5

LTBR-211, Transcript of lymphotoxin beta receptor, humanhuman

TSL 3 BASIC

Gene LTBR, Length 785 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-211ENST00000543190 MYO9BQ13459 2157 aa22.02■■□□□ 1.12
LTBR-211ENST00000543190 MYADML2A6NDP7 307 aa22.02■■□□□ 1.12
LTBR-211ENST00000543190 CABYRO75952 493 aa22.02■■□□□ 1.12
LTBR-211ENST00000543190 TIMP1P01033 207 aa22.02■■□□□ 1.12
LTBR-211ENST00000543190 C6orf222P0C671 652 aaPredicted RBP22.02■■□□□ 1.12
LTBR-211ENST00000543190 SNHG28P0DPA3 235 aa22.02■■□□□ 1.12
LTBR-211ENST00000543190 RAG1P15918 1043 aa22.02■■□□□ 1.12
LTBR-211ENST00000543190 HOMER2Q9NSB8 354 aa22.02■■□□□ 1.12
LTBR-211ENST00000543190 TMEM39AQ9NV64 488 aa22.02■■□□□ 1.12
LTBR-211ENST00000543190 CCDC171Q6TFL3 1326 aa22.02■■□□□ 1.12
LTBR-211ENST00000543190 A0A0U1RQG5 324 aaPredicted RBP22.01■■□□□ 1.11
LTBR-211ENST00000543190 ARVCFO00192 962 aa22.01■■□□□ 1.11
LTBR-211ENST00000543190 PQBP1O60828 265 aaKnown RBP22.01■■□□□ 1.11
LTBR-211ENST00000543190 MFAP1P55081 439 aaKnown RBP22.01■■□□□ 1.11
LTBR-211ENST00000543190 FPGSQ05932 587 aa22.01■■□□□ 1.11
LTBR-211ENST00000543190 ZNF697Q5TEC3 545 aa22.01■■□□□ 1.11
LTBR-211ENST00000543190 TMEM47Q9BQJ4 181 aa22.01■■□□□ 1.11
LTBR-211ENST00000543190 TNFAIP2Q03169 654 aa22■■□□□ 1.11
LTBR-211ENST00000543190 IKQ13123 557 aaPredicted RBP22■■□□□ 1.11
LTBR-211ENST00000543190 GNASQ5JWF2 1037 aa22■■□□□ 1.11
LTBR-211ENST00000543190 AKNAD1Q5T1N1 836 aa22■■□□□ 1.11
LTBR-211ENST00000543190 IQSEC1Q6DN90 963 aa22■■□□□ 1.11
LTBR-211ENST00000543190 MFSD5Q6N075 450 aa22■■□□□ 1.11
LTBR-211ENST00000543190 ZNF589Q86UQ0 364 aaPredicted RBP22■■□□□ 1.11
LTBR-211ENST00000543190 VTA1Q9NP79 307 aa22■■□□□ 1.11
LTBR-211ENST00000543190 ALAS1P13196 640 aa21.99■■□□□ 1.11
LTBR-211ENST00000543190 SLC4A3P48751 1232 aa21.99■■□□□ 1.11
LTBR-211ENST00000543190 NMIQ13287 307 aaPredicted RBP21.99■■□□□ 1.11
LTBR-211ENST00000543190 MUM1L1Q5H9M0 696 aa21.99■■□□□ 1.11
LTBR-211ENST00000543190 TAPT1Q6NXT6 567 aa21.99■■□□□ 1.11
LTBR-211ENST00000543190 FAM126BQ8IXS8 530 aa21.99■■□□□ 1.11
LTBR-211ENST00000543190 RWDD1Q9H446 243 aaPredicted RBP21.99■■□□□ 1.11
LTBR-211ENST00000543190 CCPG1Q9ULG6 757 aa21.99■■□□□ 1.11
LTBR-211ENST00000543190 MYH6P13533 1939 aa21.99■■□□□ 1.11
LTBR-211ENST00000543190 SCN10AQ9Y5Y9 1956 aa21.99■■□□□ 1.11
LTBR-211ENST00000543190 WDR19Q8NEZ3 1342 aa21.99■■□□□ 1.11
LTBR-211ENST00000543190 CD4P01730 458 aa21.98■■□□□ 1.11
LTBR-211ENST00000543190 PDHBP11177 359 aa21.98■■□□□ 1.11
LTBR-211ENST00000543190 EPHB4P54760 987 aa21.98■■□□□ 1.11
LTBR-211ENST00000543190 NUCB1Q02818 461 aa21.98■■□□□ 1.11
LTBR-211ENST00000543190 RASIP1Q5U651 963 aa21.98■■□□□ 1.11
LTBR-211ENST00000543190 SYDE2Q5VT97 1194 aa21.98■■□□□ 1.11
LTBR-211ENST00000543190 PLEKHM2Q8IWE5 1019 aa21.98■■□□□ 1.11
LTBR-211ENST00000543190 SEMA6BQ9H3T3 888 aa21.98■■□□□ 1.11
LTBR-211ENST00000543190 RNF41Q9H4P4 317 aaPredicted RBP21.98■■□□□ 1.11
LTBR-211ENST00000543190 ADD3Q9UEY8 706 aaKnown RBP21.98■■□□□ 1.11
LTBR-211ENST00000543190 MFSD6Q6ZSS7 791 aa21.97■■□□□ 1.11
LTBR-211ENST00000543190 RASGRP2Q7LDG7 609 aa21.97■■□□□ 1.11
LTBR-211ENST00000543190 CHD1LQ86WJ1 897 aa21.97■■□□□ 1.11
LTBR-211ENST00000543190 DGKHQ86XP1 1220 aa21.97■■□□□ 1.11
LTBR-211ENST00000543190 LNPKQ9C0E8 428 aa21.97■■□□□ 1.11
LTBR-211ENST00000543190 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.96■■□□□ 1.11
LTBR-211ENST00000543190 RBM47A0AV96 593 aaKnown RBP21.96■■□□□ 1.11
LTBR-211ENST00000543190 SDSP20132 328 aa21.96■■□□□ 1.11
LTBR-211ENST00000543190 ZNF543Q08ER8 600 aa21.96■■□□□ 1.11
LTBR-211ENST00000543190 FSCN1Q16658 493 aaKnown RBP21.96■■□□□ 1.11
LTBR-211ENST00000543190 CCDC178Q5BJE1 867 aa21.96■■□□□ 1.11
LTBR-211ENST00000543190 GPATCH4Q5T3I0 446 aaKnown RBP21.96■■□□□ 1.11
LTBR-211ENST00000543190 CCDC174Q6PII3 467 aa21.96■■□□□ 1.11
LTBR-211ENST00000543190 TLK2Q86UE8 772 aa21.96■■□□□ 1.11
LTBR-211ENST00000543190 RGS22Q8NE09 1264 aa21.96■■□□□ 1.11
LTBR-211ENST00000543190 ANKS1AQ92625 1134 aa21.96■■□□□ 1.11
LTBR-211ENST00000543190 RNPC3Q96LT9 517 aaKnown RBP21.96■■□□□ 1.11
LTBR-211ENST00000543190 VCANP13611 3396 aa21.95■■□□□ 1.1
LTBR-211ENST00000543190 DLL1O00548 723 aa21.95■■□□□ 1.1
LTBR-211ENST00000543190 SMPD1P17405 629 aa21.95■■□□□ 1.1
LTBR-211ENST00000543190 IRX5P78411 483 aaPredicted RBP21.95■■□□□ 1.1
LTBR-211ENST00000543190 CCDC96Q2M329 555 aa21.95■■□□□ 1.1
LTBR-211ENST00000543190 DUSP28Q4G0W2 176 aa21.95■■□□□ 1.1
LTBR-211ENST00000543190 TTBK2Q6IQ55 1244 aa21.95■■□□□ 1.1
LTBR-211ENST00000543190 TTYH1Q9H313 450 aaPredicted RBP21.95■■□□□ 1.1
LTBR-211ENST00000543190 ISY1Q9ULR0 285 aaKnown RBP21.95■■□□□ 1.1
LTBR-211ENST00000543190 CHD9Q3L8U1 2897 aa21.94■■□□□ 1.1
LTBR-211ENST00000543190 KIAA1217Q5T5P2 1943 aa21.94■■□□□ 1.1
LTBR-211ENST00000543190 TTC28Q96AY4 2481 aa21.94■■□□□ 1.1
LTBR-211ENST00000543190 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.94■■□□□ 1.1
LTBR-211ENST00000543190 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.94■■□□□ 1.1
LTBR-211ENST00000543190 HIP1O00291 1037 aa21.94■■□□□ 1.1
LTBR-211ENST00000543190 TLR3O15455 904 aaKnown RBP21.94■■□□□ 1.1
LTBR-211ENST00000543190 EDNRBP24530 442 aa21.94■■□□□ 1.1
LTBR-211ENST00000543190 PPIGQ13427 754 aaKnown RBP eCLIP21.94■■□□□ 1.16e-13■□□□□ 10.7
LTBR-211ENST00000543190 DNERQ8NFT8 737 aa21.94■■□□□ 1.1
LTBR-211ENST00000543190 CLEC4DQ8WXI8 215 aa21.94■■□□□ 1.1
LTBR-211ENST00000543190 ESR2Q92731 530 aa21.94■■□□□ 1.1
LTBR-211ENST00000543190 CDX2Q99626 313 aaPredicted RBP21.94■■□□□ 1.1
LTBR-211ENST00000543190 TRIM6-TRIM34B2RNG4 842 aa21.93■■□□□ 1.1
LTBR-211ENST00000543190 ZEB2O60315 1214 aa21.93■■□□□ 1.1
LTBR-211ENST00000543190 ALDH5A1P51649 535 aaPredicted RBP21.93■■□□□ 1.1
LTBR-211ENST00000543190 NSMFQ6X4W1 530 aa21.93■■□□□ 1.1
LTBR-211ENST00000543190 C16orf59Q7L2K0 433 aa21.93■■□□□ 1.1
LTBR-211ENST00000543190 TBC1D10CQ8IV04 446 aa21.93■■□□□ 1.1
LTBR-211ENST00000543190 DSCC1Q9BVC3 393 aa21.93■■□□□ 1.1
LTBR-211ENST00000543190 AP5M1Q9H0R1 490 aa21.93■■□□□ 1.1
LTBR-211ENST00000543190 GRIN2DO15399 1336 aa21.92■■□□□ 1.1
LTBR-211ENST00000543190 NFIBO00712 420 aa21.92■■□□□ 1.1
LTBR-211ENST00000543190 SLC16A2P36021 539 aa21.92■■□□□ 1.1
LTBR-211ENST00000543190 BAATQ14032 418 aaPredicted RBP21.92■■□□□ 1.1
LTBR-211ENST00000543190 TMEM199Q8N511 208 aa21.92■■□□□ 1.1
LTBR-211ENST00000543190 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.92■■□□□ 1.13e-8■■■■■ 29.7
LTBR-211ENST00000543190 TOMM22Q9NS69 142 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms