RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 ANKRD23Q86SG2 305 aa12.23□□□□□ -0.45
DDB1-221ENST00000543162 MB21D1Q8N884 522 aa12.23□□□□□ -0.45
DDB1-221ENST00000543162 TNFRSF25Q93038 417 aa12.23□□□□□ -0.45
DDB1-221ENST00000543162 CCDC102AQ96A19 550 aa12.23□□□□□ -0.45
DDB1-221ENST00000543162 HHIPL1Q96JK4 782 aa12.23□□□□□ -0.45
DDB1-221ENST00000543162 CHAMP1Q96JM3 812 aa12.23□□□□□ -0.45
DDB1-221ENST00000543162 ZNF396Q96N95 335 aaPredicted RBP12.23□□□□□ -0.45
DDB1-221ENST00000543162 P2RX7Q99572 595 aaKnown RBP12.23□□□□□ -0.45
DDB1-221ENST00000543162 SLC45A1Q9Y2W3 748 aa12.23□□□□□ -0.45
DDB1-221ENST00000543162 CCDC194A0A1B0GVG4 234 aa12.22□□□□□ -0.45
DDB1-221ENST00000543162 MANSC4A6NHS7 340 aaPredicted RBP12.22□□□□□ -0.45
DDB1-221ENST00000543162 BTBD19C9JJ37 291 aa12.22□□□□□ -0.45
DDB1-221ENST00000543162 M0R2N6 131 aa12.22□□□□□ -0.45
DDB1-221ENST00000543162 PDHXO00330 501 aa12.22□□□□□ -0.45
DDB1-221ENST00000543162 ATP2A1O14983 1001 aa12.22□□□□□ -0.45
DDB1-221ENST00000543162 ALAS1P13196 640 aa12.22□□□□□ -0.45
DDB1-221ENST00000543162 HERVK_113P62684 666 aa12.22□□□□□ -0.45
DDB1-221ENST00000543162 KRT85P78386 507 aa12.22□□□□□ -0.45
DDB1-221ENST00000543162 TMEM132BQ14DG7 1078 aa12.22□□□□□ -0.45
DDB1-221ENST00000543162 MYSM1Q5VVJ2 828 aa12.22□□□□□ -0.45
DDB1-221ENST00000543162 ATL3Q6DD88 541 aa12.22□□□□□ -0.45
DDB1-221ENST00000543162 LBX2Q6XYB7 198 aa12.22□□□□□ -0.45
DDB1-221ENST00000543162 PIK3AP1Q6ZUJ8 805 aa12.22□□□□□ -0.45
DDB1-221ENST00000543162 KRT25Q7Z3Z0 450 aa12.22□□□□□ -0.45
DDB1-221ENST00000543162 REPS2Q8NFH8 660 aa12.22□□□□□ -0.45
DDB1-221ENST00000543162 RASGRP4Q8TDF6 673 aa12.22□□□□□ -0.45
DDB1-221ENST00000543162 TEX13BQ9BXU2 312 aa12.22□□□□□ -0.45
DDB1-221ENST00000543162 TFIP11Q9UBB9 837 aaKnown RBP12.22□□□□□ -0.45
DDB1-221ENST00000543162 BIN2Q9UBW5 565 aaPredicted RBP12.22□□□□□ -0.45
DDB1-221ENST00000543162 NOL7Q9UMY1 257 aaKnown RBP12.22□□□□□ -0.45
DDB1-221ENST00000543162 PCDHA6Q9UN73 950 aa12.22□□□□□ -0.45
DDB1-221ENST00000543162 PCDHA8Q9Y5H6 950 aa12.22□□□□□ -0.45
DDB1-221ENST00000543162 COL11A1P12107 1806 aaPredicted RBP12.22□□□□□ -0.45
DDB1-221ENST00000543162 MYH15Q9Y2K3 1946 aa12.21□□□□□ -0.45
DDB1-221ENST00000543162 TESPA1A2RU30 521 aaPredicted RBP12.21□□□□□ -0.45
DDB1-221ENST00000543162 GOLGA6L22H0YM25 854 aa12.21□□□□□ -0.45
DDB1-221ENST00000543162 PLS1Q14651 629 aa12.21□□□□□ -0.45
DDB1-221ENST00000543162 UBE2SQ16763 222 aa12.21□□□□□ -0.45
DDB1-221ENST00000543162 RILPL1Q5EBL4 403 aa12.21□□□□□ -0.45
DDB1-221ENST00000543162 JAKMIP3Q5VZ66 844 aa12.21□□□□□ -0.45
DDB1-221ENST00000543162 MCTP2Q6DN12 878 aa12.21□□□□□ -0.45
DDB1-221ENST00000543162 SNRNP48Q6IEG0 339 aaKnown RBP12.21□□□□□ -0.45
DDB1-221ENST00000543162 PAXIP1Q6ZW49 1069 aaPredicted RBP12.21□□□□□ -0.45
DDB1-221ENST00000543162 MCF2L2Q86YR7 1114 aa12.21□□□□□ -0.45
DDB1-221ENST00000543162 TEX2Q8IWB9 1127 aa12.21□□□□□ -0.45
DDB1-221ENST00000543162 HOMER2Q9NSB8 354 aa12.21□□□□□ -0.45
DDB1-221ENST00000543162 TMEM260Q9NX78 707 aa12.21□□□□□ -0.45
DDB1-221ENST00000543162 CFAP45Q9UL16 551 aa12.21□□□□□ -0.45
DDB1-221ENST00000543162 ZNF214Q9UL59 606 aaPredicted RBP12.21□□□□□ -0.45
DDB1-221ENST00000543162 CNPY2Q9Y2B0 182 aa12.21□□□□□ -0.45
DDB1-221ENST00000543162 SMCHD1A6NHR9 2005 aa12.21□□□□□ -0.46
DDB1-221ENST00000543162 A0A0G2JMZ2 1700 aa12.2□□□□□ -0.46
DDB1-221ENST00000543162 FAM205CA6NFA0 338 aa12.2□□□□□ -0.46
DDB1-221ENST00000543162 FAM155AB1AL88 458 aaPredicted RBP12.2□□□□□ -0.46
DDB1-221ENST00000543162 GCOM1H8Y6P7 765 aaPredicted RBP12.2□□□□□ -0.46
DDB1-221ENST00000543162 OPLAHO14841 1288 aa12.2□□□□□ -0.46
DDB1-221ENST00000543162 CFBP00751 764 aa12.2□□□□□ -0.46
DDB1-221ENST00000543162 POLR2MP0CAP2 368 aa12.2□□□□□ -0.46
DDB1-221ENST00000543162 STAT3P40763 770 aa12.2□□□□□ -0.46
DDB1-221ENST00000543162 CLK2P49760 499 aaKnown RBP12.2□□□□□ -0.46
DDB1-221ENST00000543162 APLP1P51693 650 aa12.2□□□□□ -0.46
DDB1-221ENST00000543162 INHBEP58166 350 aa12.2□□□□□ -0.46
DDB1-221ENST00000543162 NONOQ15233 471 aaKnown RBP eCLIP12.2□□□□□ -0.46
DDB1-221ENST00000543162 TKFCQ3LXA3 575 aa12.2□□□□□ -0.46
DDB1-221ENST00000543162 NOM1Q5C9Z4 860 aaKnown RBP12.2□□□□□ -0.46
DDB1-221ENST00000543162 EARS2Q5JPH6 523 aaKnown RBP12.2□□□□□ -0.46
DDB1-221ENST00000543162 USP17L6PQ6QN14 398 aa12.2□□□□□ -0.46
DDB1-221ENST00000543162 FAM43AQ8N2R8 423 aa12.2□□□□□ -0.46
DDB1-221ENST00000543162 SMCR8Q8TEV9 937 aaPredicted RBP12.2□□□□□ -0.46
DDB1-221ENST00000543162 GTF3C2Q8WUA4 911 aaPredicted RBP12.2□□□□□ -0.46
DDB1-221ENST00000543162 CLEC4DQ8WXI8 215 aa12.2□□□□□ -0.46
DDB1-221ENST00000543162 TRERF1Q96PN7 1200 aa12.2□□□□□ -0.46
DDB1-221ENST00000543162 USP28Q96RU2 1077 aa12.2□□□□□ -0.46
DDB1-221ENST00000543162 PTPN18Q99952 460 aa12.2□□□□□ -0.46
DDB1-221ENST00000543162 PAGR1Q9BTK6 254 aa12.2□□□□□ -0.46
DDB1-221ENST00000543162 CREBZFQ9NS37 354 aa12.2□□□□□ -0.46
DDB1-221ENST00000543162 RNF146Q9NTX7 359 aa12.2□□□□□ -0.46
DDB1-221ENST00000543162 BTBD7Q9P203 1132 aa12.2□□□□□ -0.46
DDB1-221ENST00000543162 RABGAP1Q9Y3P9 1069 aa12.2□□□□□ -0.46
DDB1-221ENST00000543162 TCHHQ07283 1943 aa12.19□□□□□ -0.46
DDB1-221ENST00000543162 PIK3CDO00329 1044 aa12.19□□□□□ -0.46
DDB1-221ENST00000543162 NFIBO00712 420 aa12.19□□□□□ -0.46
DDB1-221ENST00000543162 MEIS2O14770 477 aa12.19□□□□□ -0.46
DDB1-221ENST00000543162 FIBPO43427 364 aa12.19□□□□□ -0.46
DDB1-221ENST00000543162 FOSP01100 380 aaPredicted RBP12.19□□□□□ -0.46
DDB1-221ENST00000543162 CYP2C8P10632 490 aa12.19□□□□□ -0.46
DDB1-221ENST00000543162 ATP2B1P20020 1258 aa12.19□□□□□ -0.46
DDB1-221ENST00000543162 HOXA13P31271 388 aaPredicted RBP12.19□□□□□ -0.46
DDB1-221ENST00000543162 MCM4P33991 863 aa12.19□□□□□ -0.46
DDB1-221ENST00000543162 TRAPPC10P48553 1259 aa12.19□□□□□ -0.46
DDB1-221ENST00000543162 TOB1P50616 345 aaPredicted RBP12.19□□□□□ -0.46
DDB1-221ENST00000543162 CEBPZQ03701 1054 aaKnown RBP12.19□□□□□ -0.46
DDB1-221ENST00000543162 SREBF2Q12772 1141 aa12.19□□□□□ -0.46
DDB1-221ENST00000543162 GRM1Q13255 1194 aa12.19□□□□□ -0.46
DDB1-221ENST00000543162 AP3B2Q13367 1082 aa12.19□□□□□ -0.46
DDB1-221ENST00000543162 CSPP1Q1MSJ5 1256 aa12.19□□□□□ -0.46
DDB1-221ENST00000543162 INF2Q27J81 1249 aa12.19□□□□□ -0.46
DDB1-221ENST00000543162 MUM1L1Q5H9M0 696 aa12.19□□□□□ -0.46
DDB1-221ENST00000543162 ANO1Q5XXA6 986 aa12.19□□□□□ -0.46
DDB1-221ENST00000543162 POTEEQ6S8J3 1075 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms