RNA–Protein interactions for RNA: ENST00000543140.5

COL4A1-204, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A1, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-204ENST00000543140 ZNF713Q8N859 430 aaPredicted RBP18.4■□□□□ 0.54
COL4A1-204ENST00000543140 CCDC112Q8NEF3 446 aa18.4■□□□□ 0.54
COL4A1-204ENST00000543140 CCDC17Q96LX7 622 aa18.4■□□□□ 0.54
COL4A1-204ENST00000543140 GDF11O95390 407 aa18.4■□□□□ 0.54
COL4A1-204ENST00000543140 SEPT2Q15019 361 aa18.4■□□□□ 0.54
COL4A1-204ENST00000543140 KMT5BQ4FZB7 885 aa18.4■□□□□ 0.54
COL4A1-204ENST00000543140 GPATCH4Q5T3I0 446 aaKnown RBP18.4■□□□□ 0.54
COL4A1-204ENST00000543140 MRIQ9BWK5 157 aa18.4■□□□□ 0.54
COL4A1-204ENST00000543140 IDI2Q9BXS1 227 aa18.4■□□□□ 0.54
COL4A1-204ENST00000543140 KBTBD4Q9NVX7 518 aa18.4■□□□□ 0.54
COL4A1-204ENST00000543140 RWDD2AQ9UIY3 292 aa18.4■□□□□ 0.54
COL4A1-204ENST00000543140 PPIP5K2O43314 1243 aa18.39■□□□□ 0.53
COL4A1-204ENST00000543140 EDIL3O43854 480 aa18.39■□□□□ 0.53
COL4A1-204ENST00000543140 TC2NQ8N9U0 490 aa18.39■□□□□ 0.53
COL4A1-204ENST00000543140 AK8Q96MA6 479 aa18.39■□□□□ 0.53
COL4A1-204ENST00000543140 ADD3Q9UEY8 706 aaKnown RBP18.39■□□□□ 0.53
COL4A1-204ENST00000543140 PSDA5PKW4 1024 aaPredicted RBP18.39■□□□□ 0.53
COL4A1-204ENST00000543140 YDJCA8MPS7 323 aa18.39■□□□□ 0.53
COL4A1-204ENST00000543140 HDLBPQ00341 1268 aaKnown RBP18.39■□□□□ 0.53
COL4A1-204ENST00000543140 CALCRLQ16602 461 aa18.39■□□□□ 0.53
COL4A1-204ENST00000543140 TMEM139Q8IV31 216 aa18.39■□□□□ 0.53
COL4A1-204ENST00000543140 CPLX3Q8WVH0 158 aa18.39■□□□□ 0.53
COL4A1-204ENST00000543140 PRMT6Q96LA8 375 aaPredicted RBP18.39■□□□□ 0.53
COL4A1-204ENST00000543140 STK32BQ9NY57 414 aa18.39■□□□□ 0.53
COL4A1-204ENST00000543140 SERPINA10Q9UK55 444 aa18.39■□□□□ 0.53
COL4A1-204ENST00000543140 ZNF646O15015 1829 aaPredicted RBP18.38■□□□□ 0.53
COL4A1-204ENST00000543140 TRIM49BA6NDI0 452 aa18.38■□□□□ 0.53
COL4A1-204ENST00000543140 ZBTB5O15062 677 aa18.38■□□□□ 0.53
COL4A1-204ENST00000543140 SLC1A4P43007 532 aa18.38■□□□□ 0.53
COL4A1-204ENST00000543140 FKBP1AP62942 108 aaKnown RBP18.38■□□□□ 0.53
COL4A1-204ENST00000543140 BAG1Q99933 345 aaPredicted RBP18.38■□□□□ 0.53
COL4A1-204ENST00000543140 RIC8AQ9NPQ8 531 aa18.38■□□□□ 0.53
COL4A1-204ENST00000543140 KLRC4O43908 158 aa18.38■□□□□ 0.53
COL4A1-204ENST00000543140 KCNJ6P48051 423 aa18.38■□□□□ 0.53
COL4A1-204ENST00000543140 MMTAG2Q9BU76 263 aaKnown RBP18.38■□□□□ 0.53
COL4A1-204ENST00000543140 KANSL2Q9H9L4 492 aa18.38■□□□□ 0.53
COL4A1-204ENST00000543140 KRT31Q15323 416 aa18.37■□□□□ 0.53
COL4A1-204ENST00000543140 SLFN13Q68D06 897 aa18.37■□□□□ 0.53
COL4A1-204ENST00000543140 SIAH1Q8IUQ4 282 aa18.37■□□□□ 0.53
COL4A1-204ENST00000543140 ZNF710Q8N1W2 664 aa18.37■□□□□ 0.53
COL4A1-204ENST00000543140 MTMR9Q96QG7 549 aa18.37■□□□□ 0.53
COL4A1-204ENST00000543140 UIMC1Q96RL1 719 aa18.37■□□□□ 0.53
COL4A1-204ENST00000543140 VPS16Q9H269 839 aa18.37■□□□□ 0.53
COL4A1-204ENST00000543140 FILIP1LQ4L180 1135 aa18.37■□□□□ 0.53
COL4A1-204ENST00000543140 IGSF22Q8N9C0 903 aa18.37■□□□□ 0.53
COL4A1-204ENST00000543140 CUL5Q93034 780 aa18.37■□□□□ 0.53
COL4A1-204ENST00000543140 GJA10Q969M2 543 aa18.37■□□□□ 0.53
COL4A1-204ENST00000543140 CAMKK2Q96RR4 588 aa18.37■□□□□ 0.53
COL4A1-204ENST00000543140 CTAGE1Q96RT6 745 aa18.37■□□□□ 0.53
COL4A1-204ENST00000543140 NUP88Q99567 741 aaPredicted RBP18.37■□□□□ 0.53
COL4A1-204ENST00000543140 PSTPIP2Q9H939 334 aa18.37■□□□□ 0.53
COL4A1-204ENST00000543140 MYH7BA7E2Y1 1941 aa18.36■□□□□ 0.53
COL4A1-204ENST00000543140 PMS1P54277 932 aaKnown RBP18.36■□□□□ 0.53
COL4A1-204ENST00000543140 SNAP25P60880 206 aa18.36■□□□□ 0.53
COL4A1-204ENST00000543140 ICA1Q05084 483 aa18.36■□□□□ 0.53
COL4A1-204ENST00000543140 SYT10Q6XYQ8 523 aa18.36■□□□□ 0.53
COL4A1-204ENST00000543140 ADSSL1Q8N142 457 aa18.36■□□□□ 0.53
COL4A1-204ENST00000543140 KIF18AQ8NI77 898 aa18.36■□□□□ 0.53
COL4A1-204ENST00000543140 LRWD1Q9UFC0 647 aa18.36■□□□□ 0.53
COL4A1-204ENST00000543140 POTEMA6NI47 508 aa18.35■□□□□ 0.53
COL4A1-204ENST00000543140 RBL2Q08999 1139 aa18.35■□□□□ 0.53
COL4A1-204ENST00000543140 QRICH1Q2TAL8 776 aa18.35■□□□□ 0.53
COL4A1-204ENST00000543140 TATDN1Q6P1N9 297 aa18.35■□□□□ 0.53
COL4A1-204ENST00000543140 TAB2Q9NYJ8 693 aa18.35■□□□□ 0.53
COL4A1-204ENST00000543140 USP17L15C9J2P7 530 aa18.35■□□□□ 0.53
COL4A1-204ENST00000543140 USP17L13C9JLJ4 530 aa18.35■□□□□ 0.53
COL4A1-204ENST00000543140 USP17L11C9JVI0 530 aa18.35■□□□□ 0.53
COL4A1-204ENST00000543140 USP17L18D6R9N7 530 aa18.35■□□□□ 0.53
COL4A1-204ENST00000543140 USP17L22D6RA61 530 aa18.35■□□□□ 0.53
COL4A1-204ENST00000543140 USP17L17D6RBQ6 530 aa18.35■□□□□ 0.53
COL4A1-204ENST00000543140 USP17L19D6RCP7 530 aa18.35■□□□□ 0.53
COL4A1-204ENST00000543140 USP17L20D6RJB6 530 aa18.35■□□□□ 0.53
COL4A1-204ENST00000543140 N4BP3O15049 544 aa18.35■□□□□ 0.53
COL4A1-204ENST00000543140 RRP9O43818 475 aaKnown RBP18.35■□□□□ 0.53
COL4A1-204ENST00000543140 MRPL12P52815 198 aaKnown RBP18.35■□□□□ 0.53
COL4A1-204ENST00000543140 JAG1P78504 1218 aa18.35■□□□□ 0.53
COL4A1-204ENST00000543140 USP17L24Q0WX57 530 aa18.35■□□□□ 0.53
COL4A1-204ENST00000543140 ABCB5Q2M3G0 1257 aa18.35■□□□□ 0.53
COL4A1-204ENST00000543140 USP17L6PQ6QN14 398 aa18.35■□□□□ 0.53
COL4A1-204ENST00000543140 CALML4Q96GE6 196 aa18.35■□□□□ 0.53
COL4A1-204ENST00000543140 NYAP2Q9P242 653 aa18.35■□□□□ 0.53
COL4A1-204ENST00000543140 KCNJ18B7U540 433 aa18.34■□□□□ 0.53
COL4A1-204ENST00000543140 ARHGAP6O43182 974 aa18.34■□□□□ 0.53
COL4A1-204ENST00000543140 CTIFO43310 598 aaKnown RBP18.34■□□□□ 0.53
COL4A1-204ENST00000543140 ASIC1P78348 528 aa18.34■□□□□ 0.53
COL4A1-204ENST00000543140 KCNJ12Q14500 433 aa18.34■□□□□ 0.53
COL4A1-204ENST00000543140 KCNB1Q14721 858 aa18.34■□□□□ 0.53
COL4A1-204ENST00000543140 NAA30Q147X3 362 aaPredicted RBP18.34■□□□□ 0.53
COL4A1-204ENST00000543140 TCP11X2Q5H9J9 407 aa18.34■□□□□ 0.53
COL4A1-204ENST00000543140 PPFIBP1Q86W92 1011 aa18.34■□□□□ 0.53
COL4A1-204ENST00000543140 MKL1Q969V6 931 aa18.34■□□□□ 0.53
COL4A1-204ENST00000543140 MTMR8Q96EF0 704 aa18.34■□□□□ 0.53
COL4A1-204ENST00000543140 EEF2KMTQ96G04 330 aa18.34■□□□□ 0.53
COL4A1-204ENST00000543140 TRIM9Q9C026 710 aa18.34■□□□□ 0.53
COL4A1-204ENST00000543140 PCDHA1Q9Y5I3 950 aa18.34■□□□□ 0.53
COL4A1-204ENST00000543140 C10orf71Q711Q0 1435 aa18.34■□□□□ 0.53
COL4A1-204ENST00000543140 AKR1B15C9JRZ8 316 aaPredicted RBP18.34■□□□□ 0.53
COL4A1-204ENST00000543140 RAD17O75943 681 aa18.34■□□□□ 0.53
COL4A1-204ENST00000543140 RHOBTB3O94955 611 aa18.34■□□□□ 0.53
COL4A1-204ENST00000543140 CLK2P49760 499 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms