RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 TSR1Q2NL82 804 aaKnown RBP18.61■□□□□ 0.57
KDM2B-216ENST00000543025 GALNT17Q6IS24 598 aa18.61■□□□□ 0.57
KDM2B-216ENST00000543025 ZNF507Q8TCN5 953 aa18.61■□□□□ 0.57
KDM2B-216ENST00000543025 TRIM47Q96LD4 638 aa18.61■□□□□ 0.57
KDM2B-216ENST00000543025 CCSER1Q9C0I3 900 aa18.61■□□□□ 0.57
KDM2B-216ENST00000543025 ANKRD2Q9GZV1 360 aa18.61■□□□□ 0.57
KDM2B-216ENST00000543025 ABCB6Q9NP58 842 aa18.61■□□□□ 0.57
KDM2B-216ENST00000543025 IL17RBQ9NRM6 502 aa18.61■□□□□ 0.57
KDM2B-216ENST00000543025 GUCA1BQ9UMX6 200 aa18.61■□□□□ 0.57
KDM2B-216ENST00000543025 REXO2Q9Y3B8 237 aaKnown RBP18.61■□□□□ 0.57
KDM2B-216ENST00000543025 LAD1O00515 517 aa18.6■□□□□ 0.57
KDM2B-216ENST00000543025 PES1O00541 588 aaKnown RBP18.6■□□□□ 0.57
KDM2B-216ENST00000543025 USP17L8P0C7I0 530 aa18.6■□□□□ 0.57
KDM2B-216ENST00000543025 GRM4Q14833 912 aa18.6■□□□□ 0.57
KDM2B-216ENST00000543025 TYW1BQ6NUM6 668 aa18.6■□□□□ 0.57
KDM2B-216ENST00000543025 DAGLBQ8NCG7 672 aa18.6■□□□□ 0.57
KDM2B-216ENST00000543025 GIMAP8Q8ND71 665 aaPredicted RBP18.6■□□□□ 0.57
KDM2B-216ENST00000543025 SLC16A10Q8TF71 515 aa18.6■□□□□ 0.57
KDM2B-216ENST00000543025 ANKS1AQ92625 1134 aa18.6■□□□□ 0.57
KDM2B-216ENST00000543025 EXOC4Q96A65 974 aa18.6■□□□□ 0.57
KDM2B-216ENST00000543025 KBTBD4Q9NVX7 518 aa18.6■□□□□ 0.57
KDM2B-216ENST00000543025 MAGEC2Q9UBF1 373 aaPredicted RBP18.6■□□□□ 0.57
KDM2B-216ENST00000543025 ADAM21Q9UKJ8 722 aa18.6■□□□□ 0.57
KDM2B-216ENST00000543025 CAPN11Q9UMQ6 739 aa18.6■□□□□ 0.57
KDM2B-216ENST00000543025 PCDHA6Q9UN73 950 aa18.6■□□□□ 0.57
KDM2B-216ENST00000543025 PCDHA8Q9Y5H6 950 aa18.6■□□□□ 0.57
KDM2B-216ENST00000543025 CCDC88AQ3V6T2 1871 aa18.6■□□□□ 0.57
KDM2B-216ENST00000543025 KLRC4O43908 158 aa18.6■□□□□ 0.57
KDM2B-216ENST00000543025 VSNL1P62760 191 aa18.6■□□□□ 0.57
KDM2B-216ENST00000543025 SLC4A8Q2Y0W8 1093 aa18.6■□□□□ 0.57
KDM2B-216ENST00000543025 DZIP1Q86YF9 867 aaKnown RBP18.6■□□□□ 0.57
KDM2B-216ENST00000543025 TMEM60Q9H2L4 133 aa18.6■□□□□ 0.57
KDM2B-216ENST00000543025 PSD3Q9NYI0 1048 aa18.6■□□□□ 0.57
KDM2B-216ENST00000543025 MAD2L2Q9UI95 211 aa18.6■□□□□ 0.57
KDM2B-216ENST00000543025 PP2D1A8MPX8 630 aa18.59■□□□□ 0.57
KDM2B-216ENST00000543025 PSMD14O00487 310 aa18.59■□□□□ 0.57
KDM2B-216ENST00000543025 C12orf60Q5U649 245 aa18.59■□□□□ 0.57
KDM2B-216ENST00000543025 NOC3LQ8WTT2 800 aaKnown RBP18.59■□□□□ 0.57
KDM2B-216ENST00000543025 PDE11AQ9HCR9 933 aa18.59■□□□□ 0.57
KDM2B-216ENST00000543025 DNM2P50570 870 aa18.59■□□□□ 0.57
KDM2B-216ENST00000543025 INF2Q27J81 1249 aa18.59■□□□□ 0.57
KDM2B-216ENST00000543025 CCDC178Q5BJE1 867 aa18.59■□□□□ 0.57
KDM2B-216ENST00000543025 NLRP3Q96P20 1036 aa18.59■□□□□ 0.57
KDM2B-216ENST00000543025 PRPHP41219 470 aa18.58■□□□□ 0.57
KDM2B-216ENST00000543025 SPTY2D1Q68D10 685 aaPredicted RBP18.58■□□□□ 0.57
KDM2B-216ENST00000543025 NCAPH2Q6IBW4 605 aa18.58■□□□□ 0.57
KDM2B-216ENST00000543025 TRAPPC11Q7Z392 1133 aa18.58■□□□□ 0.57
KDM2B-216ENST00000543025 TRIM10Q9UDY6 481 aa18.58■□□□□ 0.57
KDM2B-216ENST00000543025 KRT83P78385 493 aa18.58■□□□□ 0.56
KDM2B-216ENST00000543025 TTI2Q6NXR4 508 aa18.58■□□□□ 0.56
KDM2B-216ENST00000543025 CUEDC2Q9H467 287 aa18.58■□□□□ 0.56
KDM2B-216ENST00000543025 MAGEF1Q9HAY2 307 aa18.58■□□□□ 0.56
KDM2B-216ENST00000543025 BARHL2Q9NY43 387 aa18.58■□□□□ 0.56
KDM2B-216ENST00000543025 MKRN1Q9UHC7 482 aaKnown RBP18.58■□□□□ 0.56
KDM2B-216ENST00000543025 GYS2P54840 703 aa18.57■□□□□ 0.56
KDM2B-216ENST00000543025 WDR93Q6P2C0 686 aa18.57■□□□□ 0.56
KDM2B-216ENST00000543025 WDR59Q6PJI9 974 aa18.57■□□□□ 0.56
KDM2B-216ENST00000543025 HEATR3Q7Z4Q2 680 aa18.57■□□□□ 0.56
KDM2B-216ENST00000543025 NOA1Q8NC60 698 aaKnown RBP18.57■□□□□ 0.56
KDM2B-216ENST00000543025 DHTKD1Q96HY7 919 aaPredicted RBP18.57■□□□□ 0.56
KDM2B-216ENST00000543025 MKNK2Q9HBH9 465 aa18.57■□□□□ 0.56
KDM2B-216ENST00000543025 ZBTB7AO95365 584 aa18.57■□□□□ 0.56
KDM2B-216ENST00000543025 MEA1Q16626 185 aa18.57■□□□□ 0.56
KDM2B-216ENST00000543025 MUM1L1Q5H9M0 696 aa18.57■□□□□ 0.56
KDM2B-216ENST00000543025 ZNF662Q6ZS27 426 aa18.57■□□□□ 0.56
KDM2B-216ENST00000543025 PLIN2Q99541 437 aa18.57■□□□□ 0.56
KDM2B-216ENST00000543025 SUGCTQ9HAC7 445 aa18.57■□□□□ 0.56
KDM2B-216ENST00000543025 EXOC1Q9NV70 894 aa18.57■□□□□ 0.56
KDM2B-216ENST00000543025 JAG2Q9Y219 1238 aa18.57■□□□□ 0.56
KDM2B-216ENST00000543025 ROBO3Q96MS0 1386 aa18.57■□□□□ 0.56
KDM2B-216ENST00000543025 COL11A2P13942 1736 aaPredicted RBP18.56■□□□□ 0.56
KDM2B-216ENST00000543025 STXBP3O00186 592 aa18.56■□□□□ 0.56
KDM2B-216ENST00000543025 CYTH3O43739 400 aa18.56■□□□□ 0.56
KDM2B-216ENST00000543025 TSPY3P0CV98 308 aa18.56■□□□□ 0.56
KDM2B-216ENST00000543025 TSPY8P0CW00 308 aa18.56■□□□□ 0.56
KDM2B-216ENST00000543025 SRGNP10124 158 aa18.56■□□□□ 0.56
KDM2B-216ENST00000543025 HERVK_113P62684 666 aa18.56■□□□□ 0.56
KDM2B-216ENST00000543025 CASP8Q14790 479 aa18.56■□□□□ 0.56
KDM2B-216ENST00000543025 CCDC122Q5T0U0 273 aa18.56■□□□□ 0.56
KDM2B-216ENST00000543025 AMOTL1Q8IY63 956 aa18.56■□□□□ 0.56
KDM2B-216ENST00000543025 CSGALNACT2Q8N6G5 542 aa18.56■□□□□ 0.56
KDM2B-216ENST00000543025 EHBP1Q8NDI1 1231 aa18.56■□□□□ 0.56
KDM2B-216ENST00000543025 DYNLL2Q96FJ2 89 aa18.56■□□□□ 0.56
KDM2B-216ENST00000543025 AK8Q96MA6 479 aa18.56■□□□□ 0.56
KDM2B-216ENST00000543025 TUBGCP2Q9BSJ2 902 aa18.56■□□□□ 0.56
KDM2B-216ENST00000543025 NUP58Q9BVL2 599 aa18.56■□□□□ 0.56
KDM2B-216ENST00000543025 TCP11L1Q9NUJ3 509 aa18.56■□□□□ 0.56
KDM2B-216ENST00000543025 B4DLN1 442 aa18.56■□□□□ 0.56
KDM2B-216ENST00000543025 TRIM21P19474 475 aaKnown RBP18.56■□□□□ 0.56
KDM2B-216ENST00000543025 RETREG2Q8NC44 543 aa18.56■□□□□ 0.56
KDM2B-216ENST00000543025 CCDC47Q96A33 483 aaKnown RBP18.56■□□□□ 0.56
KDM2B-216ENST00000543025 BICDL2A1A5D9 508 aa18.55■□□□□ 0.56
KDM2B-216ENST00000543025 USP17L3A6NCW0 530 aa18.55■□□□□ 0.56
KDM2B-216ENST00000543025 USP17L4A6NCW7 530 aa18.55■□□□□ 0.56
KDM2B-216ENST00000543025 ZBTB22O15209 634 aa18.55■□□□□ 0.56
KDM2B-216ENST00000543025 KRT86O43790 486 aa18.55■□□□□ 0.56
KDM2B-216ENST00000543025 CYLC1P35663 651 aaPredicted RBP18.55■□□□□ 0.56
KDM2B-216ENST00000543025 USP17L1Q7RTZ2 530 aa18.55■□□□□ 0.56
KDM2B-216ENST00000543025 TTYH3Q9C0H2 523 aa18.55■□□□□ 0.56
KDM2B-216ENST00000543025 VPS18Q9P253 973 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms