RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 ORC4O43929 436 aa20.56■□□□□ 0.88
PPP1CA-210ENST00000542876 CABYRO75952 493 aa20.56■□□□□ 0.88
PPP1CA-210ENST00000542876 FOSL2P15408 326 aa20.56■□□□□ 0.88
PPP1CA-210ENST00000542876 BEX3Q00994 111 aa20.56■□□□□ 0.88
PPP1CA-210ENST00000542876 RRP12Q5JTH9 1297 aaKnown RBP20.56■□□□□ 0.88
PPP1CA-210ENST00000542876 NSMFQ6X4W1 530 aa20.56■□□□□ 0.88
PPP1CA-210ENST00000542876 TLK2Q86UE8 772 aa20.56■□□□□ 0.88
PPP1CA-210ENST00000542876 CYP39A1Q9NYL5 469 aa20.56■□□□□ 0.88
PPP1CA-210ENST00000542876 UNC80Q8N2C7 3258 aa20.56■□□□□ 0.88
PPP1CA-210ENST00000542876 ICAM1P05362 532 aa20.55■□□□□ 0.88
PPP1CA-210ENST00000542876 PDE1AP54750 535 aa20.55■□□□□ 0.88
PPP1CA-210ENST00000542876 NKX3-2P78367 333 aa20.55■□□□□ 0.88
PPP1CA-210ENST00000542876 ALX1Q15699 326 aa20.55■□□□□ 0.88
PPP1CA-210ENST00000542876 FAM126BQ8IXS8 530 aa20.55■□□□□ 0.88
PPP1CA-210ENST00000542876 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.55■□□□□ 0.88
PPP1CA-210ENST00000542876 CTAGE5O15320 804 aa20.54■□□□□ 0.88
PPP1CA-210ENST00000542876 DYNC1LI2O43237 492 aaPredicted RBP20.54■□□□□ 0.88
PPP1CA-210ENST00000542876 TOP1P11387 765 aaKnown RBP20.54■□□□□ 0.88
PPP1CA-210ENST00000542876 DNAJB2P25686 324 aa20.54■□□□□ 0.88
PPP1CA-210ENST00000542876 FSCN1Q16658 493 aaKnown RBP20.54■□□□□ 0.88
PPP1CA-210ENST00000542876 MCMDC2Q4G0Z9 681 aa20.54■□□□□ 0.88
PPP1CA-210ENST00000542876 MUM1L1Q5H9M0 696 aa20.54■□□□□ 0.88
PPP1CA-210ENST00000542876 IQSEC1Q6DN90 963 aa20.54■□□□□ 0.88
PPP1CA-210ENST00000542876 CXCL17Q6UXB2 119 aa20.54■□□□□ 0.88
PPP1CA-210ENST00000542876 TICAM2Q86XR7 235 aa20.54■□□□□ 0.88
PPP1CA-210ENST00000542876 PPP1R12CQ9BZL4 782 aa20.54■□□□□ 0.88
PPP1CA-210ENST00000542876 ADD3Q9UEY8 706 aaKnown RBP20.54■□□□□ 0.88
PPP1CA-210ENST00000542876 GNEQ9Y223 722 aaKnown RBP20.54■□□□□ 0.88
PPP1CA-210ENST00000542876 FGAP02671 866 aa20.53■□□□□ 0.88
PPP1CA-210ENST00000542876 FGRP09769 529 aa20.53■□□□□ 0.88
PPP1CA-210ENST00000542876 NOVP48745 357 aa20.53■□□□□ 0.88
PPP1CA-210ENST00000542876 HDAC1Q13547 482 aaPredicted RBP20.53■□□□□ 0.88
PPP1CA-210ENST00000542876 SYDE2Q5VT97 1194 aa20.53■□□□□ 0.88
PPP1CA-210ENST00000542876 PSRC1Q6PGN9 363 aaPredicted RBP20.53■□□□□ 0.88
PPP1CA-210ENST00000542876 EEPD1Q7L9B9 569 aa20.53■□□□□ 0.88
PPP1CA-210ENST00000542876 RASGRP2Q7LDG7 609 aa20.53■□□□□ 0.88
PPP1CA-210ENST00000542876 CRBNQ96SW2 442 aa20.53■□□□□ 0.88
PPP1CA-210ENST00000542876 COL25A1Q9BXS0 654 aaPredicted RBP20.53■□□□□ 0.88
PPP1CA-210ENST00000542876 SEZ6LQ9BYH1 1024 aa20.53■□□□□ 0.88
PPP1CA-210ENST00000542876 RANBP17Q9H2T7 1088 aaKnown RBP20.53■□□□□ 0.88
PPP1CA-210ENST00000542876 VTA1Q9NP79 307 aa20.53■□□□□ 0.88
PPP1CA-210ENST00000542876 Q9Y3F1 56 aa20.53■□□□□ 0.88
PPP1CA-210ENST00000542876 CSF2RAP15509 400 aa20.52■□□□□ 0.88
PPP1CA-210ENST00000542876 SMPD1P17405 629 aa20.52■□□□□ 0.88
PPP1CA-210ENST00000542876 SLC16A2P36021 539 aa20.52■□□□□ 0.88
PPP1CA-210ENST00000542876 FBXO16Q8IX29 292 aaPredicted RBP20.52■□□□□ 0.88
PPP1CA-210ENST00000542876 FAM227BQ96M60 508 aa20.52■□□□□ 0.88
PPP1CA-210ENST00000542876 PNMA2Q9UL42 364 aa20.52■□□□□ 0.88
PPP1CA-210ENST00000542876 ASTN1O14525 1302 aa20.52■□□□□ 0.87
PPP1CA-210ENST00000542876 A0A0D9SFI3 127 aa20.51■□□□□ 0.87
PPP1CA-210ENST00000542876 TRIM6-TRIM34B2RNG4 842 aa20.51■□□□□ 0.87
PPP1CA-210ENST00000542876 ITGA7Q13683 1181 aa20.51■□□□□ 0.87
PPP1CA-210ENST00000542876 TMEM240Q5SV17 173 aa20.51■□□□□ 0.87
PPP1CA-210ENST00000542876 TTBK2Q6IQ55 1244 aa20.51■□□□□ 0.87
PPP1CA-210ENST00000542876 BTNL9Q6UXG8 535 aa20.51■□□□□ 0.87
PPP1CA-210ENST00000542876 KIAA1211Q6ZU35 1233 aa20.51■□□□□ 0.87
PPP1CA-210ENST00000542876 TIFAQ96CG3 184 aa20.51■□□□□ 0.87
PPP1CA-210ENST00000542876 TMEM47Q9BQJ4 181 aa20.51■□□□□ 0.87
PPP1CA-210ENST00000542876 GPCPD1Q9NPB8 672 aa20.51■□□□□ 0.87
PPP1CA-210ENST00000542876 PDGFCQ9NRA1 345 aa20.51■□□□□ 0.87
PPP1CA-210ENST00000542876 TCP11L1Q9NUJ3 509 aa20.51■□□□□ 0.87
PPP1CA-210ENST00000542876 CDH23Q9H251 3354 aa20.51■□□□□ 0.87
PPP1CA-210ENST00000542876 FRMPD2Q68DX3 1309 aaPredicted RBP20.51■□□□□ 0.87
PPP1CA-210ENST00000542876 PTPDC1A2A3K4 754 aa20.5■□□□□ 0.87
PPP1CA-210ENST00000542876 CD4P01730 458 aa20.5■□□□□ 0.87
PPP1CA-210ENST00000542876 HSPD1P10809 573 aaKnown RBP20.5■□□□□ 0.87
PPP1CA-210ENST00000542876 MFAP1P55081 439 aaKnown RBP20.5■□□□□ 0.87
PPP1CA-210ENST00000542876 BAATQ14032 418 aaPredicted RBP20.5■□□□□ 0.87
PPP1CA-210ENST00000542876 TAPT1Q6NXT6 567 aa20.5■□□□□ 0.87
PPP1CA-210ENST00000542876 SLC43A3Q8NBI5 491 aa20.5■□□□□ 0.87
PPP1CA-210ENST00000542876 MPHOSPH6Q99547 160 aaKnown RBP20.5■□□□□ 0.87
PPP1CA-210ENST00000542876 MTIF3Q9H2K0 278 aaKnown RBP20.5■□□□□ 0.87
PPP1CA-210ENST00000542876 HIPK3Q9H422 1215 aa20.5■□□□□ 0.87
PPP1CA-210ENST00000542876 DDX49Q9Y6V7 483 aaKnown RBP20.5■□□□□ 0.87
PPP1CA-210ENST00000542876 ZMYM6O95789 1325 aa20.5■□□□□ 0.87
PPP1CA-210ENST00000542876 MCM3APO60318 1980 aa20.49■□□□□ 0.87
PPP1CA-210ENST00000542876 LOC102724159A0A0B4J2E5 919 aa20.49■□□□□ 0.87
PPP1CA-210ENST00000542876 ACRP10323 421 aa20.49■□□□□ 0.87
PPP1CA-210ENST00000542876 PCP11498 1178 aaKnown RBP20.49■□□□□ 0.87
PPP1CA-210ENST00000542876 CYP2C18P33260 490 aa20.49■□□□□ 0.87
PPP1CA-210ENST00000542876 HAND2P61296 217 aa20.49■□□□□ 0.87
PPP1CA-210ENST00000542876 NMIQ13287 307 aaPredicted RBP20.49■□□□□ 0.87
PPP1CA-210ENST00000542876 GRIN2CQ14957 1233 aa20.49■□□□□ 0.87
PPP1CA-210ENST00000542876 PWP2Q15269 919 aaKnown RBP20.49■□□□□ 0.87
PPP1CA-210ENST00000542876 MFSD6Q6ZSS7 791 aa20.49■□□□□ 0.87
PPP1CA-210ENST00000542876 ZNF365Q70YC5 407 aa20.49■□□□□ 0.87
PPP1CA-210ENST00000542876 C16orf59Q7L2K0 433 aa20.49■□□□□ 0.87
PPP1CA-210ENST00000542876 MORC4Q8TE76 937 aa20.49■□□□□ 0.87
PPP1CA-210ENST00000542876 RILPL2Q969X0 211 aa20.49■□□□□ 0.87
PPP1CA-210ENST00000542876 TTC14Q96N46 770 aa20.49■□□□□ 0.87
PPP1CA-210ENST00000542876 ZNF576Q9H609 170 aa20.49■□□□□ 0.87
PPP1CA-210ENST00000542876 IL23AQ9NPF7 189 aa20.49■□□□□ 0.87
PPP1CA-210ENST00000542876 ALDH5A1P51649 535 aaPredicted RBP20.48■□□□□ 0.87
PPP1CA-210ENST00000542876 PURBQ96QR8 312 aaKnown RBP20.48■□□□□ 0.87
PPP1CA-210ENST00000542876 RNF41Q9H4P4 317 aaPredicted RBP20.48■□□□□ 0.87
PPP1CA-210ENST00000542876 CCDC171Q6TFL3 1326 aa20.48■□□□□ 0.87
PPP1CA-210ENST00000542876 NFIBO00712 420 aa20.47■□□□□ 0.87
PPP1CA-210ENST00000542876 FGBP02675 491 aa20.47■□□□□ 0.87
PPP1CA-210ENST00000542876 PDHBP11177 359 aa20.47■□□□□ 0.87
PPP1CA-210ENST00000542876 CALML3P27482 149 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms