RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 SHCBP1Q8NEM2 672 aa12.34□□□□□ -0.43
NPIPB3-210ENST00000542817 FGD4Q96M96 766 aa12.34□□□□□ -0.43
NPIPB3-210ENST00000542817 PCDHA1Q9Y5I3 950 aa12.34□□□□□ -0.43
NPIPB3-210ENST00000542817 DOCK3Q8IZD9 2030 aa12.34□□□□□ -0.43
NPIPB3-210ENST00000542817 M0R2N6 131 aa12.33□□□□□ -0.44
NPIPB3-210ENST00000542817 CDKL5O76039 1030 aa12.33□□□□□ -0.44
NPIPB3-210ENST00000542817 ALAS1P13196 640 aa12.33□□□□□ -0.44
NPIPB3-210ENST00000542817 LACTBP83111 547 aaPredicted RBP12.33□□□□□ -0.44
NPIPB3-210ENST00000542817 PLS1Q14651 629 aa12.33□□□□□ -0.44
NPIPB3-210ENST00000542817 USP6NLQ92738 828 aa12.33□□□□□ -0.44
NPIPB3-210ENST00000542817 TRERF1Q96PN7 1200 aa12.33□□□□□ -0.44
NPIPB3-210ENST00000542817 RNF146Q9NTX7 359 aa12.33□□□□□ -0.44
NPIPB3-210ENST00000542817 VPS54Q9P1Q0 977 aa12.33□□□□□ -0.44
NPIPB3-210ENST00000542817 COL20A1Q9P218 1284 aa12.33□□□□□ -0.44
NPIPB3-210ENST00000542817 GJD2Q9UKL4 321 aa12.33□□□□□ -0.44
NPIPB3-210ENST00000542817 ASTN1O14525 1302 aa12.32□□□□□ -0.44
NPIPB3-210ENST00000542817 DNAJC25-GNG10A0A024R161 153 aa12.32□□□□□ -0.44
NPIPB3-210ENST00000542817 MEIS2O14770 477 aa12.32□□□□□ -0.44
NPIPB3-210ENST00000542817 FOXN1O15353 648 aa12.32□□□□□ -0.44
NPIPB3-210ENST00000542817 EDIL3O43854 480 aa12.32□□□□□ -0.44
NPIPB3-210ENST00000542817 SLC25A27O95847 323 aa12.32□□□□□ -0.44
NPIPB3-210ENST00000542817 IGHA2P01877 340 aa12.32□□□□□ -0.44
NPIPB3-210ENST00000542817 GJB2P29033 226 aa12.32□□□□□ -0.44
NPIPB3-210ENST00000542817 TKFCQ3LXA3 575 aa12.32□□□□□ -0.44
NPIPB3-210ENST00000542817 MORN1Q5T089 497 aa12.32□□□□□ -0.44
NPIPB3-210ENST00000542817 CPLX2Q6PUV4 134 aaKnown RBP12.32□□□□□ -0.44
NPIPB3-210ENST00000542817 HEATR3Q7Z4Q2 680 aa12.32□□□□□ -0.44
NPIPB3-210ENST00000542817 TRIM22Q8IYM9 498 aa12.32□□□□□ -0.44
NPIPB3-210ENST00000542817 RGS22Q8NE09 1264 aa12.32□□□□□ -0.44
NPIPB3-210ENST00000542817 ZNF296Q8WUU4 475 aaPredicted RBP12.32□□□□□ -0.44
NPIPB3-210ENST00000542817 TRIM47Q96LD4 638 aa12.32□□□□□ -0.44
NPIPB3-210ENST00000542817 PURBQ96QR8 312 aaKnown RBP12.32□□□□□ -0.44
NPIPB3-210ENST00000542817 ZMYND12Q9H0C1 365 aa12.32□□□□□ -0.44
NPIPB3-210ENST00000542817 MROH8Q9H579 483 aa12.32□□□□□ -0.44
NPIPB3-210ENST00000542817 A1CFQ9NQ94 594 aaKnown RBP12.32□□□□□ -0.44
NPIPB3-210ENST00000542817 HOMER2Q9NSB8 354 aa12.32□□□□□ -0.44
NPIPB3-210ENST00000542817 FOXD4L1Q9NU39 408 aa12.32□□□□□ -0.44
NPIPB3-210ENST00000542817 RBM27Q9P2N5 1060 aaKnown RBP12.32□□□□□ -0.44
NPIPB3-210ENST00000542817 SEC63Q9UGP8 760 aaKnown RBP12.32□□□□□ -0.44
NPIPB3-210ENST00000542817 PLXNB2O15031 1838 aa12.32□□□□□ -0.44
NPIPB3-210ENST00000542817 ABCB11O95342 1321 aa12.32□□□□□ -0.44
NPIPB3-210ENST00000542817 COBLO75128 1261 aa12.31□□□□□ -0.44
NPIPB3-210ENST00000542817 HSPA8P11142 646 aaKnown RBP12.31□□□□□ -0.44
NPIPB3-210ENST00000542817 PTPREP23469 700 aa12.31□□□□□ -0.44
NPIPB3-210ENST00000542817 DDIT3P35638 169 aa12.31□□□□□ -0.44
NPIPB3-210ENST00000542817 CLK2P49760 499 aaKnown RBP12.31□□□□□ -0.44
NPIPB3-210ENST00000542817 HSD17B4P51659 736 aa12.31□□□□□ -0.44
NPIPB3-210ENST00000542817 HMGN5P82970 282 aaKnown RBP12.31□□□□□ -0.44
NPIPB3-210ENST00000542817 SP3Q02447 781 aa12.31□□□□□ -0.44
NPIPB3-210ENST00000542817 GRB14Q14449 540 aa12.31□□□□□ -0.44
NPIPB3-210ENST00000542817 PPP1R18Q6NYC8 613 aa12.31□□□□□ -0.44
NPIPB3-210ENST00000542817 GPR142Q7Z601 462 aa12.31□□□□□ -0.44
NPIPB3-210ENST00000542817 NCAPG2Q86XI2 1143 aa12.31□□□□□ -0.44
NPIPB3-210ENST00000542817 CHST13Q8NET6 341 aa12.31□□□□□ -0.44
NPIPB3-210ENST00000542817 ALG1Q9BT22 464 aa12.31□□□□□ -0.44
NPIPB3-210ENST00000542817 PHF20Q9BVI0 1012 aa12.31□□□□□ -0.44
NPIPB3-210ENST00000542817 SH3GLB2Q9NR46 395 aa12.31□□□□□ -0.44
NPIPB3-210ENST00000542817 CYP39A1Q9NYL5 469 aa12.31□□□□□ -0.44
NPIPB3-210ENST00000542817 KCNJ14Q9UNX9 436 aa12.31□□□□□ -0.44
NPIPB3-210ENST00000542817 LCTP09848 1927 aa12.31□□□□□ -0.44
NPIPB3-210ENST00000542817 MYH6P13533 1939 aa12.31□□□□□ -0.44
NPIPB3-210ENST00000542817 ESYT2A0FGR8 921 aa12.3□□□□□ -0.44
NPIPB3-210ENST00000542817 hCG_1984214I3L0E3 225 aa12.3□□□□□ -0.44
NPIPB3-210ENST00000542817 PIK3CDO00329 1044 aa12.3□□□□□ -0.44
NPIPB3-210ENST00000542817 RPS6P62753 249 aaKnown RBP12.3□□□□□ -0.44
NPIPB3-210ENST00000542817 CCNA1P78396 465 aa12.3□□□□□ -0.44
NPIPB3-210ENST00000542817 BAATQ14032 418 aaPredicted RBP12.3□□□□□ -0.44
NPIPB3-210ENST00000542817 USP17L6PQ6QN14 398 aa12.3□□□□□ -0.44
NPIPB3-210ENST00000542817 SLC30A10Q6XR72 485 aa12.3□□□□□ -0.44
NPIPB3-210ENST00000542817 ZNF713Q8N859 430 aaPredicted RBP12.3□□□□□ -0.44
NPIPB3-210ENST00000542817 FBXO18Q8NFZ0 1043 aa12.3□□□□□ -0.44
NPIPB3-210ENST00000542817 OXER1Q8TDS5 423 aa12.3□□□□□ -0.44
NPIPB3-210ENST00000542817 SYTL5Q8TDW5 730 aaPredicted RBP12.3□□□□□ -0.44
NPIPB3-210ENST00000542817 TNFRSF25Q93038 417 aa12.3□□□□□ -0.44
NPIPB3-210ENST00000542817 ACAD9Q9H845 621 aa12.3□□□□□ -0.44
NPIPB3-210ENST00000542817 RIC8AQ9NPQ8 531 aa12.3□□□□□ -0.44
NPIPB3-210ENST00000542817 PNMA2Q9UL42 364 aa12.3□□□□□ -0.44
NPIPB3-210ENST00000542817 MRPL11Q9Y3B7 192 aaKnown RBP12.3□□□□□ -0.44
NPIPB3-210ENST00000542817 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.3□□□□□ -0.44
NPIPB3-210ENST00000542817 SMCO2A6NFE2 343 aa12.29□□□□□ -0.44
NPIPB3-210ENST00000542817 ECM2O94769 699 aaPredicted RBP12.29□□□□□ -0.44
NPIPB3-210ENST00000542817 HSPA1AP0DMV8 641 aaKnown RBP12.29□□□□□ -0.44
NPIPB3-210ENST00000542817 HSPA1BP0DMV9 641 aaKnown RBP12.29□□□□□ -0.44
NPIPB3-210ENST00000542817 MAPK4P31152 587 aa12.29□□□□□ -0.44
NPIPB3-210ENST00000542817 COPB2P35606 906 aa12.29□□□□□ -0.44
NPIPB3-210ENST00000542817 PSMC4P43686 418 aa12.29□□□□□ -0.44
NPIPB3-210ENST00000542817 NAPAP54920 295 aa12.29□□□□□ -0.44
NPIPB3-210ENST00000542817 AKAP17AQ02040 695 aaKnown RBP12.29□□□□□ -0.44
NPIPB3-210ENST00000542817 CNTN2Q02246 1040 aa12.29□□□□□ -0.44
NPIPB3-210ENST00000542817 UBE2SQ16763 222 aa12.29□□□□□ -0.44
NPIPB3-210ENST00000542817 ZNF792Q3KQV3 632 aa12.29□□□□□ -0.44
NPIPB3-210ENST00000542817 EARS2Q5JPH6 523 aaKnown RBP12.29□□□□□ -0.44
NPIPB3-210ENST00000542817 KRT40Q6A162 431 aa12.29□□□□□ -0.44
NPIPB3-210ENST00000542817 PLEKHH3Q7Z736 793 aa12.29□□□□□ -0.44
NPIPB3-210ENST00000542817 ABRAQ8N0Z2 381 aa12.29□□□□□ -0.44
NPIPB3-210ENST00000542817 FAM133AQ8N9E0 248 aa12.29□□□□□ -0.44
NPIPB3-210ENST00000542817 DAGLBQ8NCG7 672 aa12.29□□□□□ -0.44
NPIPB3-210ENST00000542817 SPRYD3Q8NCJ5 442 aa12.29□□□□□ -0.44
NPIPB3-210ENST00000542817 CD99L2Q8TCZ2 262 aa12.29□□□□□ -0.44
NPIPB3-210ENST00000542817 GABRQQ9UN88 632 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms