RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 COG1Q8WTW3 980 aa5.09□□□□□ -1.59
SFSWAP-211ENST00000542813 EVI5LQ96CN4 794 aa5.09□□□□□ -1.59
SFSWAP-211ENST00000542813 USP26Q9BXU7 913 aa5.09□□□□□ -1.59
SFSWAP-211ENST00000542813 UBA5Q9GZZ9 404 aa5.09□□□□□ -1.59
SFSWAP-211ENST00000542813 MTFR1LQ9H019 292 aa5.09□□□□□ -1.59
SFSWAP-211ENST00000542813 ZNF700Q9H0M5 742 aa5.09□□□□□ -1.59
SFSWAP-211ENST00000542813 IFT22Q9H7X7 185 aa5.09□□□□□ -1.59
SFSWAP-211ENST00000542813 SPEF1Q9Y4P9 236 aa5.09□□□□□ -1.59
SFSWAP-211ENST00000542813 RNF114Q9Y508 228 aa5.09□□□□□ -1.59
SFSWAP-211ENST00000542813 PCDHGC5Q9Y5F6 944 aa5.09□□□□□ -1.59
SFSWAP-211ENST00000542813 SCRIBQ14160 1630 aa5.08□□□□□ -1.6
SFSWAP-211ENST00000542813 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.08□□□□□ -1.6
SFSWAP-211ENST00000542813 MEGF11A6BM72 1044 aa5.08□□□□□ -1.6
SFSWAP-211ENST00000542813 GABRDO14764 452 aa5.08□□□□□ -1.6
SFSWAP-211ENST00000542813 FANCGO15287 622 aa5.08□□□□□ -1.6
SFSWAP-211ENST00000542813 DLX3O60479 287 aa5.08□□□□□ -1.6
SFSWAP-211ENST00000542813 PPM1BO75688 479 aa5.08□□□□□ -1.6
SFSWAP-211ENST00000542813 ERVK-24P63145 666 aa5.08□□□□□ -1.6
SFSWAP-211ENST00000542813 RALBP1Q15311 655 aa5.08□□□□□ -1.6
SFSWAP-211ENST00000542813 GFOD2Q3B7J2 385 aa5.08□□□□□ -1.6
SFSWAP-211ENST00000542813 CFAP100Q494V2 611 aa5.08□□□□□ -1.6
SFSWAP-211ENST00000542813 ZBTB37Q5TC79 503 aa5.08□□□□□ -1.6
SFSWAP-211ENST00000542813 SYDE2Q5VT97 1194 aa5.08□□□□□ -1.6
SFSWAP-211ENST00000542813 UBE2R2Q712K3 238 aaPredicted RBP5.08□□□□□ -1.6
SFSWAP-211ENST00000542813 CRACR2BQ8N4Y2 399 aaPredicted RBP5.08□□□□□ -1.6
SFSWAP-211ENST00000542813 OR2W6PQ8NHA6 318 aa5.08□□□□□ -1.6
SFSWAP-211ENST00000542813 PI4K2BQ8TCG2 481 aa5.08□□□□□ -1.6
SFSWAP-211ENST00000542813 ZNF507Q8TCN5 953 aa5.08□□□□□ -1.6
SFSWAP-211ENST00000542813 IL17RAQ96F46 866 aa5.08□□□□□ -1.6
SFSWAP-211ENST00000542813 MRGPRX3Q96LB0 322 aa5.08□□□□□ -1.6
SFSWAP-211ENST00000542813 WDR18Q9BV38 432 aa5.08□□□□□ -1.6
SFSWAP-211ENST00000542813 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.08□□□□□ -1.6
SFSWAP-211ENST00000542813 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.08□□□□□ -1.6
SFSWAP-211ENST00000542813 WHRNQ9P202 907 aa5.08□□□□□ -1.6
SFSWAP-211ENST00000542813 APOBEC2Q9Y235 224 aaKnown RBP5.08□□□□□ -1.6
SFSWAP-211ENST00000542813 BLACEA4D250 179 aa5.07□□□□□ -1.6
SFSWAP-211ENST00000542813 WDR64B1ANS9 1081 aa5.07□□□□□ -1.6
SFSWAP-211ENST00000542813 B4E1Z4 1266 aa5.07□□□□□ -1.6
SFSWAP-211ENST00000542813 NEMP1O14524 444 aa5.07□□□□□ -1.6
SFSWAP-211ENST00000542813 PRPF3O43395 683 aaKnown RBP5.07□□□□□ -1.6
SFSWAP-211ENST00000542813 GAS2O43903 313 aaKnown RBP5.07□□□□□ -1.6
SFSWAP-211ENST00000542813 ZEB2O60315 1214 aa5.07□□□□□ -1.6
SFSWAP-211ENST00000542813 AOC2O75106 756 aa5.07□□□□□ -1.6
SFSWAP-211ENST00000542813 PPFIA4O75335 1185 aa5.07□□□□□ -1.6
SFSWAP-211ENST00000542813 RFPL1O75677 317 aa5.07□□□□□ -1.6
SFSWAP-211ENST00000542813 ABLIM3O94929 683 aa5.07□□□□□ -1.6
SFSWAP-211ENST00000542813 PYGMP11217 842 aa5.07□□□□□ -1.6
SFSWAP-211ENST00000542813 ZSCAN20P17040 1043 aaPredicted RBP5.07□□□□□ -1.6
SFSWAP-211ENST00000542813 BPIP17213 487 aa5.07□□□□□ -1.6
SFSWAP-211ENST00000542813 PAX3P23760 479 aa5.07□□□□□ -1.6
SFSWAP-211ENST00000542813 ID3Q02535 119 aa5.07□□□□□ -1.6
SFSWAP-211ENST00000542813 DHX8Q14562 1220 aaKnown RBP5.07□□□□□ -1.6
SFSWAP-211ENST00000542813 CDCA2Q69YH5 1023 aaPredicted RBP5.07□□□□□ -1.6
SFSWAP-211ENST00000542813 POMZP3Q6PJE2 187 aa5.07□□□□□ -1.6
SFSWAP-211ENST00000542813 TRIM59Q8IWR1 403 aa5.07□□□□□ -1.6
SFSWAP-211ENST00000542813 SVIPQ8NHG7 77 aa5.07□□□□□ -1.6
SFSWAP-211ENST00000542813 GIMAP7Q8NHV1 300 aa5.07□□□□□ -1.6
SFSWAP-211ENST00000542813 BAHD1Q8TBE0 780 aaPredicted RBP5.07□□□□□ -1.6
SFSWAP-211ENST00000542813 CYB5D2Q8WUJ1 264 aa5.07□□□□□ -1.6
SFSWAP-211ENST00000542813 BTN2A2Q8WVV5 523 aa5.07□□□□□ -1.6
SFSWAP-211ENST00000542813 JPH3Q8WXH2 748 aaPredicted RBP5.07□□□□□ -1.6
SFSWAP-211ENST00000542813 PTPRN2Q92932 1015 aa5.07□□□□□ -1.6
SFSWAP-211ENST00000542813 SCLYQ96I15 445 aa5.07□□□□□ -1.6
SFSWAP-211ENST00000542813 ZNF512BQ96KM6 892 aaPredicted RBP5.07□□□□□ -1.6
SFSWAP-211ENST00000542813 DPH2Q9BQC3 489 aaPredicted RBP5.07□□□□□ -1.6
SFSWAP-211ENST00000542813 KRTAP4-9Q9BYQ8 210 aa5.07□□□□□ -1.6
SFSWAP-211ENST00000542813 RHOBTB2Q9BYZ6 727 aa5.07□□□□□ -1.6
SFSWAP-211ENST00000542813 MKRN2Q9H000 416 aaKnown RBP5.07□□□□□ -1.6
SFSWAP-211ENST00000542813 AKT3Q9Y243 479 aa5.07□□□□□ -1.6
SFSWAP-211ENST00000542813 EMC9Q9Y3B6 208 aa5.07□□□□□ -1.6
SFSWAP-211ENST00000542813 ZNF451Q9Y4E5 1061 aa5.07□□□□□ -1.6
SFSWAP-211ENST00000542813 TNKSO95271 1327 aa5.06□□□□□ -1.6
SFSWAP-211ENST00000542813 LOC100289279A0A1B0GTE1 492 aa5.06□□□□□ -1.6
SFSWAP-211ENST00000542813 TCRBV16S1A1N1A0A5B0 115 aa5.06□□□□□ -1.6
SFSWAP-211ENST00000542813 IFRD1O00458 451 aaPredicted RBP5.06□□□□□ -1.6
SFSWAP-211ENST00000542813 SH3BP5O60239 455 aa5.06□□□□□ -1.6
SFSWAP-211ENST00000542813 FBXO21O94952 628 aa5.06□□□□□ -1.6
SFSWAP-211ENST00000542813 CD247P20963 164 aa5.06□□□□□ -1.6
SFSWAP-211ENST00000542813 MAP4P27816 1152 aaKnown RBP5.06□□□□□ -1.6
SFSWAP-211ENST00000542813 ID4P47928 161 aa5.06□□□□□ -1.6
SFSWAP-211ENST00000542813 SCNN1BP51168 640 aa5.06□□□□□ -1.6
SFSWAP-211ENST00000542813 MAP4K2Q12851 820 aa5.06□□□□□ -1.6
SFSWAP-211ENST00000542813 ANKRD39Q53RE8 183 aa5.06□□□□□ -1.6
SFSWAP-211ENST00000542813 PIK3R6Q5UE93 754 aa5.06□□□□□ -1.6
SFSWAP-211ENST00000542813 MAMDC2Q7Z304 686 aaPredicted RBP5.06□□□□□ -1.6
SFSWAP-211ENST00000542813 DGKHQ86XP1 1220 aa5.06□□□□□ -1.6
SFSWAP-211ENST00000542813 ADCY4Q8NFM4 1077 aa5.06□□□□□ -1.6
SFSWAP-211ENST00000542813 KCTD13Q8WZ19 329 aa5.06□□□□□ -1.6
SFSWAP-211ENST00000542813 RCC1LQ96I51 464 aaKnown RBP5.06□□□□□ -1.6
SFSWAP-211ENST00000542813 MAGEB10Q96LZ2 347 aaPredicted RBP5.06□□□□□ -1.6
SFSWAP-211ENST00000542813 MFSD14AQ96MC6 490 aa5.06□□□□□ -1.6
SFSWAP-211ENST00000542813 ARPC5LQ9BPX5 153 aa5.06□□□□□ -1.6
SFSWAP-211ENST00000542813 FBRSQ9HAH7 460 aa5.06□□□□□ -1.6
SFSWAP-211ENST00000542813 LUC7LQ9NQ29 371 aaKnown RBP5.06□□□□□ -1.6
SFSWAP-211ENST00000542813 CRTAC1Q9NQ79 661 aa5.06□□□□□ -1.6
SFSWAP-211ENST00000542813 RAD18Q9NS91 495 aa5.06□□□□□ -1.6
SFSWAP-211ENST00000542813 PIM2Q9P1W9 311 aa5.06□□□□□ -1.6
SFSWAP-211ENST00000542813 SYNGAP1Q96PV0 1343 aa5.05□□□□□ -1.6
SFSWAP-211ENST00000542813 HMGB1P1B2RPK0 211 aaPredicted RBP5.05□□□□□ -1.6
SFSWAP-211ENST00000542813 APPP05067 770 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms