RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 ABCB7O75027 752 aa8.96□□□□□ -0.98
PDLIM5-221ENST00000542407 CAVIN2O95810 425 aa8.96□□□□□ -0.98
PDLIM5-221ENST00000542407 LDHCP07864 332 aa8.96□□□□□ -0.98
PDLIM5-221ENST00000542407 PSMC1P62191 440 aaKnown RBP8.96□□□□□ -0.98
PDLIM5-221ENST00000542407 ZRSR1Q15695 479 aaKnown RBP8.96□□□□□ -0.98
PDLIM5-221ENST00000542407 PDCD2Q16342 344 aaPredicted RBP8.96□□□□□ -0.98
PDLIM5-221ENST00000542407 MYSM1Q5VVJ2 828 aa8.96□□□□□ -0.98
PDLIM5-221ENST00000542407 FMNL3Q8IVF7 1028 aa8.96□□□□□ -0.98
PDLIM5-221ENST00000542407 DHX40Q8IX18 779 aaKnown RBP8.96□□□□□ -0.98
PDLIM5-221ENST00000542407 PPM1EQ8WY54 764 aa8.96□□□□□ -0.98
PDLIM5-221ENST00000542407 SLC26A6Q9BXS9 759 aa8.96□□□□□ -0.98
PDLIM5-221ENST00000542407 PARD6BQ9BYG5 372 aa8.96□□□□□ -0.98
PDLIM5-221ENST00000542407 GOLPH3LQ9H4A5 285 aa8.96□□□□□ -0.98
PDLIM5-221ENST00000542407 PDE11AQ9HCR9 933 aa8.96□□□□□ -0.98
PDLIM5-221ENST00000542407 POLR3EQ9NVU0 708 aa8.96□□□□□ -0.98
PDLIM5-221ENST00000542407 IFNKQ9P0W0 207 aa8.96□□□□□ -0.98
PDLIM5-221ENST00000542407 RABL2BQ9UNT1 228 aa8.96□□□□□ -0.98
PDLIM5-221ENST00000542407 ATP8B1O43520 1251 aa8.95□□□□□ -0.98
PDLIM5-221ENST00000542407 BAG3O95817 575 aa8.95□□□□□ -0.98
PDLIM5-221ENST00000542407 IMPDH2P12268 514 aa8.95□□□□□ -0.98
PDLIM5-221ENST00000542407 SSRP1Q08945 709 aaKnown RBP8.95□□□□□ -0.98
PDLIM5-221ENST00000542407 TBC1D8BQ0IIM8 1120 aa8.95□□□□□ -0.98
PDLIM5-221ENST00000542407 HSP90B2PQ58FF3 399 aa8.95□□□□□ -0.98
PDLIM5-221ENST00000542407 FAM47AQ5JRC9 791 aa8.95□□□□□ -0.98
PDLIM5-221ENST00000542407 STYK1Q6J9G0 422 aa8.95□□□□□ -0.98
PDLIM5-221ENST00000542407 CPLX2Q6PUV4 134 aaKnown RBP8.95□□□□□ -0.98
PDLIM5-221ENST00000542407 SYNE3Q6ZMZ3 975 aa8.95□□□□□ -0.98
PDLIM5-221ENST00000542407 TAX1BP1Q86VP1 789 aa8.95□□□□□ -0.98
PDLIM5-221ENST00000542407 CEP57L1Q8IYX8 460 aa8.95□□□□□ -0.98
PDLIM5-221ENST00000542407 CMTR1Q8N1G2 835 aaKnown RBP8.95□□□□□ -0.98
PDLIM5-221ENST00000542407 LINC00301Q8NCQ3 95 aa8.95□□□□□ -0.98
PDLIM5-221ENST00000542407 TGFBRAP1Q8WUH2 860 aa8.95□□□□□ -0.98
PDLIM5-221ENST00000542407 UBXN6Q9BZV1 441 aa8.95□□□□□ -0.98
PDLIM5-221ENST00000542407 XPO4Q9C0E2 1151 aaKnown RBP8.95□□□□□ -0.98
PDLIM5-221ENST00000542407 UTP6Q9NYH9 597 aaKnown RBP8.95□□□□□ -0.98
PDLIM5-221ENST00000542407 TPX2Q9ULW0 747 aaKnown RBP8.95□□□□□ -0.98
PDLIM5-221ENST00000542407 CLIC4Q9Y696 253 aa8.95□□□□□ -0.98
PDLIM5-221ENST00000542407 RIMBP2O15034 1052 aa8.95□□□□□ -0.98
PDLIM5-221ENST00000542407 DDAH1O94760 285 aa8.95□□□□□ -0.98
PDLIM5-221ENST00000542407 POLR3DP05423 398 aaPredicted RBP8.95□□□□□ -0.98
PDLIM5-221ENST00000542407 PLCD1P51178 756 aa8.95□□□□□ -0.98
PDLIM5-221ENST00000542407 SLC5A9Q2M3M2 681 aa8.95□□□□□ -0.98
PDLIM5-221ENST00000542407 TSNAXIP1Q2TAA8 658 aa8.95□□□□□ -0.98
PDLIM5-221ENST00000542407 IFIT1BQ5T764 474 aaKnown RBP8.95□□□□□ -0.98
PDLIM5-221ENST00000542407 HHATQ5VTY9 493 aa8.95□□□□□ -0.98
PDLIM5-221ENST00000542407 ISM2Q6H9L7 571 aa8.95□□□□□ -0.98
PDLIM5-221ENST00000542407 DRAXINQ8NBI3 349 aaPredicted RBP8.95□□□□□ -0.98
PDLIM5-221ENST00000542407 SMCR8Q8TEV9 937 aaPredicted RBP8.95□□□□□ -0.98
PDLIM5-221ENST00000542407 DYNLL2Q96FJ2 89 aa8.95□□□□□ -0.98
PDLIM5-221ENST00000542407 IL17RBQ9NRM6 502 aa8.95□□□□□ -0.98
PDLIM5-221ENST00000542407 TMOD4Q9NZQ9 345 aa8.95□□□□□ -0.98
PDLIM5-221ENST00000542407 DAGLAQ9Y4D2 1042 aa8.95□□□□□ -0.98
PDLIM5-221ENST00000542407 FLT1P17948 1338 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 PSDA5PKW4 1024 aaPredicted RBP8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 USP5P45974 858 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 NT5C2P49902 561 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 GTF2IP78347 998 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 PPP2R5BQ15173 497 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 PKN1Q16512 942 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 LONRF2Q1L5Z9 754 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 INF2Q27J81 1249 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 DPP8Q6V1X1 898 aaPredicted RBP8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 IQCA1Q86XH1 822 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 C2CD5Q86YS7 1000 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 CCAR1Q8IX12 1150 aaKnown RBP8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 ENGASEQ8NFI3 743 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 C7orf43Q8WVR3 580 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 ANKS1AQ92625 1134 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 TAF4BQ92750 862 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 CRACR2AQ9BSW2 395 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 MFRPQ9BY79 579 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 FUT8Q9BYC5 575 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 ANO10Q9NW15 660 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 SHTN1A0MZ66 631 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 YEATS4O95619 227 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 SLC3A2P08195 630 aaKnown RBP8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 PDE4BQ07343 736 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 GOLGA8FQ08AF8 430 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 GOLGA8DPQ0D2H9 430 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 PTPN21Q16825 1174 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 SLC4A8Q2Y0W8 1093 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 MAPKAPK5Q8IW41 473 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 CCDC150Q8NCX0 1101 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 MAP3K14Q99558 947 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 SRRTQ9BXP5 876 aaKnown RBP8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 UBA5Q9GZZ9 404 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 PLSCR2Q9NRY7 297 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 MAGEC2Q9UBF1 373 aaPredicted RBP8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 PCDHA7Q9UN72 937 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 MYH1P12882 1939 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 C10orf71Q711Q0 1435 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 SCN9AQ15858 1988 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 N4BP1O75113 896 aaKnown RBP8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 PLEKHA8P1O95397 391 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 DEXIO95424 95 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 MMP1P03956 469 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 MNAT1P51948 309 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 GNG11P61952 73 aa8.94□□□□□ -0.98
PDLIM5-221ENST00000542407 PPP2R3AQ06190 1150 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms