RNA–Protein interactions for RNA: ENST00000542242.1

DDX11-219, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 795 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-219ENST00000542242 KCTD1Q719H9 257 aa16.73■□□□□ 0.27
DDX11-219ENST00000542242 GAS2L3Q86XJ1 694 aa16.73■□□□□ 0.27
DDX11-219ENST00000542242 IFNL1Q8IU54 200 aa16.73■□□□□ 0.27
DDX11-219ENST00000542242 ZNF713Q8N859 430 aaPredicted RBP16.73■□□□□ 0.27
DDX11-219ENST00000542242 DAGLBQ8NCG7 672 aa16.73■□□□□ 0.27
DDX11-219ENST00000542242 GMCL1P1Q8NEA9 526 aa16.73■□□□□ 0.27
DDX11-219ENST00000542242 ZBTB21Q9ULJ3 1066 aa16.73■□□□□ 0.27
DDX11-219ENST00000542242 SYNPO2Q9UMS6 1093 aa16.73■□□□□ 0.27
DDX11-219ENST00000542242 PCDHA4Q9UN74 947 aa16.73■□□□□ 0.27
DDX11-219ENST00000542242 CEP131Q9UPN4 1083 aa16.73■□□□□ 0.27
DDX11-219ENST00000542242 FAM205CA6NFA0 338 aa16.72■□□□□ 0.27
DDX11-219ENST00000542242 ATP2B1P20020 1258 aa16.72■□□□□ 0.27
DDX11-219ENST00000542242 MARCKSP29966 332 aaPredicted RBP16.72■□□□□ 0.27
DDX11-219ENST00000542242 GTF2A2P52657 109 aa16.72■□□□□ 0.27
DDX11-219ENST00000542242 TYW1BQ6NUM6 668 aa16.72■□□□□ 0.27
DDX11-219ENST00000542242 CCDC84Q86UT8 332 aaPredicted RBP16.72■□□□□ 0.27
DDX11-219ENST00000542242 MRPS27Q92552 414 aaKnown RBP16.72■□□□□ 0.27
DDX11-219ENST00000542242 NUP62CLQ9H1M0 184 aa16.72■□□□□ 0.27
DDX11-219ENST00000542242 R3HDMLQ9H3Y0 253 aa16.72■□□□□ 0.27
DDX11-219ENST00000542242 DACT1Q9NYF0 836 aa16.72■□□□□ 0.27
DDX11-219ENST00000542242 PARP14Q460N5 1801 aa16.72■□□□□ 0.27
DDX11-219ENST00000542242 RLFQ13129 1914 aa16.72■□□□□ 0.27
DDX11-219ENST00000542242 A0A0G2JLL6 359 aaPredicted RBP16.71■□□□□ 0.27
DDX11-219ENST00000542242 TRIM75PA6NK02 468 aa16.71■□□□□ 0.27
DDX11-219ENST00000542242 F5H6K3 240 aa16.71■□□□□ 0.27
DDX11-219ENST00000542242 CXCL11O14625 94 aa16.71■□□□□ 0.27
DDX11-219ENST00000542242 NDUFB10O96000 172 aa16.71■□□□□ 0.27
DDX11-219ENST00000542242 KLRC3Q07444 240 aa16.71■□□□□ 0.27
DDX11-219ENST00000542242 NOM1Q5C9Z4 860 aaKnown RBP16.71■□□□□ 0.27
DDX11-219ENST00000542242 EARS2Q5JPH6 523 aaKnown RBP16.71■□□□□ 0.27
DDX11-219ENST00000542242 PRRT2Q7Z6L0 340 aaPredicted RBP16.71■□□□□ 0.27
DDX11-219ENST00000542242 ADGRF4Q8IZF3 695 aa16.71■□□□□ 0.27
DDX11-219ENST00000542242 GMCL1Q96IK5 515 aa16.71■□□□□ 0.27
DDX11-219ENST00000542242 GOLPH3LQ9H4A5 285 aa16.71■□□□□ 0.27
DDX11-219ENST00000542242 CLSTN2Q9H4D0 955 aa16.71■□□□□ 0.27
DDX11-219ENST00000542242 JMJD4Q9H9V9 463 aa16.71■□□□□ 0.27
DDX11-219ENST00000542242 GINM1Q9NU53 330 aa16.71■□□□□ 0.27
DDX11-219ENST00000542242 PCDHB6Q9Y5E3 794 aa16.71■□□□□ 0.27
DDX11-219ENST00000542242 PNMA6FA0A0J9YX94 578 aa16.7■□□□□ 0.26
DDX11-219ENST00000542242 CUTAO60888 179 aa16.7■□□□□ 0.26
DDX11-219ENST00000542242 NR1I2O75469 434 aa16.7■□□□□ 0.26
DDX11-219ENST00000542242 TRPA1O75762 1119 aa16.7■□□□□ 0.26
DDX11-219ENST00000542242 BMP15O95972 392 aa16.7■□□□□ 0.26
DDX11-219ENST00000542242 SLC16A2P36021 539 aa16.7■□□□□ 0.26
DDX11-219ENST00000542242 AXDND1Q5T1B0 1012 aaPredicted RBP16.7■□□□□ 0.26
DDX11-219ENST00000542242 GPAT2Q6NUI2 795 aa16.7■□□□□ 0.26
DDX11-219ENST00000542242 PIK3AP1Q6ZUJ8 805 aa16.7■□□□□ 0.26
DDX11-219ENST00000542242 FAM43AQ8N2R8 423 aa16.7■□□□□ 0.26
DDX11-219ENST00000542242 WDR18Q9BV38 432 aa16.7■□□□□ 0.26
DDX11-219ENST00000542242 ZMYND12Q9H0C1 365 aa16.7■□□□□ 0.26
DDX11-219ENST00000542242 C6orf50Q9HD87 102 aa16.7■□□□□ 0.26
DDX11-219ENST00000542242 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.7■□□□□ 0.26
DDX11-219ENST00000542242 TSKSQ9UJT2 592 aa16.7■□□□□ 0.26
DDX11-219ENST00000542242 ZHX2Q9Y6X8 837 aa16.7■□□□□ 0.26
DDX11-219ENST00000542242 ZSWIM8A7E2V4 1837 aa16.69■□□□□ 0.26
DDX11-219ENST00000542242 CCL15-CCL14A0A0B4J2E2 113 aa16.69■□□□□ 0.26
DDX11-219ENST00000542242 CCDC194A0A1B0GVG4 234 aa16.69■□□□□ 0.26
DDX11-219ENST00000542242 A0A1W2PRG0 241 aa16.69■□□□□ 0.26
DDX11-219ENST00000542242 ESYT2A0FGR8 921 aa16.69■□□□□ 0.26
DDX11-219ENST00000542242 SMCO2A6NFE2 343 aa16.69■□□□□ 0.26
DDX11-219ENST00000542242 BTBD19C9JJ37 291 aa16.69■□□□□ 0.26
DDX11-219ENST00000542242 USP17L10C9JJH3 530 aa16.69■□□□□ 0.26
DDX11-219ENST00000542242 ADAMTS3O15072 1205 aa16.69■□□□□ 0.26
DDX11-219ENST00000542242 ASNSP08243 561 aa16.69■□□□□ 0.26
DDX11-219ENST00000542242 CETPP11597 493 aa16.69■□□□□ 0.26
DDX11-219ENST00000542242 GNA11P29992 359 aa16.69■□□□□ 0.26
DDX11-219ENST00000542242 TRAPPC10P48553 1259 aa16.69■□□□□ 0.26
DDX11-219ENST00000542242 MRE11P49959 708 aa16.69■□□□□ 0.26
DDX11-219ENST00000542242 FAM160A1Q05DH4 1040 aa16.69■□□□□ 0.26
DDX11-219ENST00000542242 MKRN4PQ13434 485 aaPredicted RBP16.69■□□□□ 0.26
DDX11-219ENST00000542242 SNAPC2Q13487 334 aa16.69■□□□□ 0.26
DDX11-219ENST00000542242 CCL15Q16663 113 aa16.69■□□□□ 0.26
DDX11-219ENST00000542242 TTC38Q5R3I4 469 aa16.69■□□□□ 0.26
DDX11-219ENST00000542242 PPP1R18Q6NYC8 613 aa16.69■□□□□ 0.26
DDX11-219ENST00000542242 KRI1Q8N9T8 703 aaKnown RBP16.69■□□□□ 0.26
DDX11-219ENST00000542242 MTMR8Q96EF0 704 aa16.69■□□□□ 0.26
DDX11-219ENST00000542242 TNMDQ9H2S6 317 aa16.69■□□□□ 0.26
DDX11-219ENST00000542242 TSPY26PQ9H489 355 aa16.69■□□□□ 0.26
DDX11-219ENST00000542242 SH2D4AQ9H788 454 aa16.69■□□□□ 0.26
DDX11-219ENST00000542242 GOPCQ9HD26 462 aa16.69■□□□□ 0.26
DDX11-219ENST00000542242 ZCCHC17Q9NP64 241 aaKnown RBP16.69■□□□□ 0.26
DDX11-219ENST00000542242 PICK1Q9NRD5 415 aa16.69■□□□□ 0.26
DDX11-219ENST00000542242 TMX2Q9Y320 296 aa16.69■□□□□ 0.26
DDX11-219ENST00000542242 MGAMO43451 1857 aa16.69■□□□□ 0.26
DDX11-219ENST00000542242 ADGRA2Q96PE1 1338 aa16.69■□□□□ 0.26
DDX11-219ENST00000542242 M0R2N6 131 aa16.68■□□□□ 0.26
DDX11-219ENST00000542242 ZBTB5O15062 677 aa16.68■□□□□ 0.26
DDX11-219ENST00000542242 KINO60870 393 aaKnown RBP16.68■□□□□ 0.26
DDX11-219ENST00000542242 BMP3P12645 472 aa16.68■□□□□ 0.26
DDX11-219ENST00000542242 CMA1P23946 247 aa16.68■□□□□ 0.26
DDX11-219ENST00000542242 SH3D19Q5HYK7 790 aa16.68■□□□□ 0.26
DDX11-219ENST00000542242 KRT25Q7Z3Z0 450 aa16.68■□□□□ 0.26
DDX11-219ENST00000542242 ENGASEQ8NFI3 743 aa16.68■□□□□ 0.26
DDX11-219ENST00000542242 RASGRP4Q8TDF6 673 aa16.68■□□□□ 0.26
DDX11-219ENST00000542242 ACER1Q8TDN7 264 aa16.68■□□□□ 0.26
DDX11-219ENST00000542242 NUP88Q99567 741 aaPredicted RBP16.68■□□□□ 0.26
DDX11-219ENST00000542242 GRPEL1Q9HAV7 217 aa16.68■□□□□ 0.26
DDX11-219ENST00000542242 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.68■□□□□ 0.26
DDX11-219ENST00000542242 PCDHA6Q9UN73 950 aa16.68■□□□□ 0.26
DDX11-219ENST00000542242 PCDHA8Q9Y5H6 950 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms