RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 GNL2Q13823 731 aaKnown RBP10.61□□□□□ -0.71
LDHA-220ENST00000542179 MAP3K11Q16584 847 aa10.61□□□□□ -0.71
LDHA-220ENST00000542179 KLHL40Q2TBA0 621 aa10.61□□□□□ -0.71
LDHA-220ENST00000542179 RILPL1Q5EBL4 403 aa10.61□□□□□ -0.71
LDHA-220ENST00000542179 KIAA1755Q5JYT7 1200 aa10.61□□□□□ -0.71
LDHA-220ENST00000542179 HEATR3Q7Z4Q2 680 aa10.61□□□□□ -0.71
LDHA-220ENST00000542179 LEO1Q8WVC0 666 aaPredicted RBP10.61□□□□□ -0.71
LDHA-220ENST00000542179 TNFRSF25Q93038 417 aa10.61□□□□□ -0.71
LDHA-220ENST00000542179 USP28Q96RU2 1077 aa10.61□□□□□ -0.71
LDHA-220ENST00000542179 ANP32EQ9BTT0 268 aa10.61□□□□□ -0.71
LDHA-220ENST00000542179 GLIS2Q9BZE0 524 aaPredicted RBP10.61□□□□□ -0.71
LDHA-220ENST00000542179 VAT1LQ9HCJ6 419 aa10.61□□□□□ -0.71
LDHA-220ENST00000542179 PICK1Q9NRD5 415 aa10.61□□□□□ -0.71
LDHA-220ENST00000542179 TFIP11Q9UBB9 837 aaKnown RBP10.61□□□□□ -0.71
LDHA-220ENST00000542179 RABGEF1Q9UJ41 708 aa10.61□□□□□ -0.71
LDHA-220ENST00000542179 PAPPA2Q9BXP8 1791 aa10.6□□□□□ -0.71
LDHA-220ENST00000542179 C19orf81C9J6K1 198 aa10.6□□□□□ -0.71
LDHA-220ENST00000542179 TMEM232C9JQI7 657 aa10.6□□□□□ -0.71
LDHA-220ENST00000542179 M0R2N6 131 aa10.6□□□□□ -0.71
LDHA-220ENST00000542179 WDR46O15213 610 aaKnown RBP10.6□□□□□ -0.71
LDHA-220ENST00000542179 FIBPO43427 364 aa10.6□□□□□ -0.71
LDHA-220ENST00000542179 RAD21O60216 631 aa10.6□□□□□ -0.71
LDHA-220ENST00000542179 YEATS4O95619 227 aa10.6□□□□□ -0.71
LDHA-220ENST00000542179 MBD3O95983 291 aa10.6□□□□□ -0.71
LDHA-220ENST00000542179 NCLP19338 710 aaKnown RBP10.6□□□□□ -0.71
LDHA-220ENST00000542179 GNA11P29992 359 aa10.6□□□□□ -0.71
LDHA-220ENST00000542179 NF2P35240 595 aa10.6□□□□□ -0.71
LDHA-220ENST00000542179 SLC16A2P36021 539 aa10.6□□□□□ -0.71
LDHA-220ENST00000542179 STAT2P52630 851 aa10.6□□□□□ -0.71
LDHA-220ENST00000542179 BACE1P56817 501 aa10.6□□□□□ -0.71
LDHA-220ENST00000542179 UBE2HP62256 183 aa10.6□□□□□ -0.71
LDHA-220ENST00000542179 TRAF1Q13077 416 aa10.6□□□□□ -0.71
LDHA-220ENST00000542179 SYDE2Q5VT97 1194 aa10.6□□□□□ -0.71
LDHA-220ENST00000542179 FAM160B2Q86V87 743 aa10.6□□□□□ -0.71
LDHA-220ENST00000542179 HOMER1Q86YM7 354 aa10.6□□□□□ -0.71
LDHA-220ENST00000542179 TEX2Q8IWB9 1127 aa10.6□□□□□ -0.71
LDHA-220ENST00000542179 BLIDQ8IZY5 108 aa10.6□□□□□ -0.71
LDHA-220ENST00000542179 ZNF280CQ8ND82 737 aa10.6□□□□□ -0.71
LDHA-220ENST00000542179 CHURC1Q8WUH1 139 aa10.6□□□□□ -0.71
LDHA-220ENST00000542179 PIBF1Q8WXW3 757 aa10.6□□□□□ -0.71
LDHA-220ENST00000542179 GPKOWQ92917 476 aaPredicted RBP eCLIP10.6□□□□□ -0.715e-7■■■■□ 22.3
LDHA-220ENST00000542179 ZKSCAN4Q969J2 545 aaPredicted RBP10.6□□□□□ -0.71
LDHA-220ENST00000542179 CDCA5Q96FF9 252 aa10.6□□□□□ -0.71
LDHA-220ENST00000542179 SPATA32Q96LK8 384 aa10.6□□□□□ -0.71
LDHA-220ENST00000542179 NUP88Q99567 741 aaPredicted RBP10.6□□□□□ -0.71
LDHA-220ENST00000542179 GDPD2Q9HCC8 539 aa10.6□□□□□ -0.71
LDHA-220ENST00000542179 C6orf50Q9HD87 102 aa10.6□□□□□ -0.71
LDHA-220ENST00000542179 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.6□□□□□ -0.71
LDHA-220ENST00000542179 FEM1BQ9UK73 627 aa10.6□□□□□ -0.71
LDHA-220ENST00000542179 MORC2Q9Y6X9 1032 aaPredicted RBP10.6□□□□□ -0.71
LDHA-220ENST00000542179 SMCO2A6NFE2 343 aa10.59□□□□□ -0.71
LDHA-220ENST00000542179 UNCXA6NJT0 531 aa10.59□□□□□ -0.71
LDHA-220ENST00000542179 PPP1R11O60927 126 aaPredicted RBP10.59□□□□□ -0.71
LDHA-220ENST00000542179 IREB2P48200 963 aaKnown RBP10.59□□□□□ -0.71
LDHA-220ENST00000542179 TRAPPC10P48553 1259 aa10.59□□□□□ -0.71
LDHA-220ENST00000542179 TOB1P50616 345 aaPredicted RBP10.59□□□□□ -0.71
LDHA-220ENST00000542179 NAPAP54920 295 aa10.59□□□□□ -0.71
LDHA-220ENST00000542179 PLCB2Q00722 1185 aa10.59□□□□□ -0.71
LDHA-220ENST00000542179 SPP2Q13103 211 aa10.59□□□□□ -0.71
LDHA-220ENST00000542179 NR5A1Q13285 461 aa10.59□□□□□ -0.71
LDHA-220ENST00000542179 CDC37Q16543 378 aaPredicted RBP10.59□□□□□ -0.71
LDHA-220ENST00000542179 EAPPQ56P03 285 aaPredicted RBP10.59□□□□□ -0.71
LDHA-220ENST00000542179 FAM83BQ5T0W9 1011 aa10.59□□□□□ -0.71
LDHA-220ENST00000542179 ANO1Q5XXA6 986 aa10.59□□□□□ -0.71
LDHA-220ENST00000542179 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.59□□□□□ -0.71
LDHA-220ENST00000542179 SPICE1Q8N0Z3 855 aa10.59□□□□□ -0.71
LDHA-220ENST00000542179 LINC00301Q8NCQ3 95 aa10.59□□□□□ -0.71
LDHA-220ENST00000542179 BICD2Q8TD16 824 aa10.59□□□□□ -0.71
LDHA-220ENST00000542179 WNT2BQ93097 391 aa10.59□□□□□ -0.71
LDHA-220ENST00000542179 C12orf42Q96LP6 360 aa10.59□□□□□ -0.71
LDHA-220ENST00000542179 FEZ1Q99689 392 aa10.59□□□□□ -0.71
LDHA-220ENST00000542179 GLT8D2Q9H1C3 349 aa10.59□□□□□ -0.71
LDHA-220ENST00000542179 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.59□□□□□ -0.71
LDHA-220ENST00000542179 PRR12Q9ULL5 1215 aa10.59□□□□□ -0.71
LDHA-220ENST00000542179 DDX49Q9Y6V7 483 aaKnown RBP10.59□□□□□ -0.71
LDHA-220ENST00000542179 ZHX2Q9Y6X8 837 aa10.59□□□□□ -0.71
LDHA-220ENST00000542179 BAZ2BQ9UIF8 2168 aaKnown RBP10.59□□□□□ -0.71
LDHA-220ENST00000542179 PHIPQ8WWQ0 1821 aa10.58□□□□□ -0.72
LDHA-220ENST00000542179 PPP6R2O75170 966 aa10.58□□□□□ -0.72
LDHA-220ENST00000542179 GADD45BO75293 160 aaPredicted RBP10.58□□□□□ -0.72
LDHA-220ENST00000542179 SLC39A14Q15043 492 aa10.58□□□□□ -0.72
LDHA-220ENST00000542179 QRICH1Q2TAL8 776 aa10.58□□□□□ -0.72
LDHA-220ENST00000542179 SH3D19Q5HYK7 790 aa10.58□□□□□ -0.72
LDHA-220ENST00000542179 DLK2Q6UY11 383 aa10.58□□□□□ -0.72
LDHA-220ENST00000542179 CCDC84Q86UT8 332 aaPredicted RBP10.58□□□□□ -0.72
LDHA-220ENST00000542179 ANKRD13AQ8IZ07 590 aa10.58□□□□□ -0.72
LDHA-220ENST00000542179 RBM46Q8TBY0 533 aaKnown RBP10.58□□□□□ -0.72
LDHA-220ENST00000542179 GPT2Q8TD30 523 aa10.58□□□□□ -0.72
LDHA-220ENST00000542179 KCNG4Q8TDN1 519 aa10.58□□□□□ -0.72
LDHA-220ENST00000542179 AMNQ9BXJ7 453 aa10.58□□□□□ -0.72
LDHA-220ENST00000542179 RANBP17Q9H2T7 1088 aaKnown RBP10.58□□□□□ -0.72
LDHA-220ENST00000542179 NOL7Q9UMY1 257 aaKnown RBP10.58□□□□□ -0.72
LDHA-220ENST00000542179 PCDHA6Q9UN73 950 aa10.58□□□□□ -0.72
LDHA-220ENST00000542179 AFG3L2Q9Y4W6 797 aa10.58□□□□□ -0.72
LDHA-220ENST00000542179 PCDHA8Q9Y5H6 950 aa10.58□□□□□ -0.72
LDHA-220ENST00000542179 CLIC4Q9Y696 253 aa10.58□□□□□ -0.72
LDHA-220ENST00000542179 SNCAIPQ9Y6H5 919 aa10.58□□□□□ -0.72
LDHA-220ENST00000542179 FDX1P10109 184 aa10.57□□□□□ -0.72
LDHA-220ENST00000542179 MRPL12P52815 198 aaKnown RBP10.57□□□□□ -0.72
LDHA-220ENST00000542179 PTPN5P54829 565 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 441 ms