RNA–Protein interactions for RNA: ENST00000541866.5

COPS7A-212, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-212ENST00000541866 TMEM47Q9BQJ4 181 aa16.83■□□□□ 0.28
COPS7A-212ENST00000541866 TCP11L1Q9NUJ3 509 aa16.83■□□□□ 0.28
COPS7A-212ENST00000541866 ADCY6O43306 1168 aa16.82■□□□□ 0.28
COPS7A-212ENST00000541866 ICAM1P05362 532 aa16.82■□□□□ 0.28
COPS7A-212ENST00000541866 PCP11498 1178 aaKnown RBP16.82■□□□□ 0.28
COPS7A-212ENST00000541866 SDSP20132 328 aa16.82■□□□□ 0.28
COPS7A-212ENST00000541866 IRX5P78411 483 aaPredicted RBP16.82■□□□□ 0.28
COPS7A-212ENST00000541866 FPGSQ05932 587 aa16.82■□□□□ 0.28
COPS7A-212ENST00000541866 MUM1L1Q5H9M0 696 aa16.82■□□□□ 0.28
COPS7A-212ENST00000541866 AKNAD1Q5T1N1 836 aa16.82■□□□□ 0.28
COPS7A-212ENST00000541866 SYDE2Q5VT97 1194 aa16.82■□□□□ 0.28
COPS7A-212ENST00000541866 ZNF589Q86UQ0 364 aaPredicted RBP16.82■□□□□ 0.28
COPS7A-212ENST00000541866 CHD1LQ86WJ1 897 aa16.82■□□□□ 0.28
COPS7A-212ENST00000541866 SMC5Q8IY18 1101 aa16.82■□□□□ 0.28
COPS7A-212ENST00000541866 TTC14Q96N46 770 aa16.82■□□□□ 0.28
COPS7A-212ENST00000541866 KATNBL1Q9H079 304 aa16.82■□□□□ 0.28
COPS7A-212ENST00000541866 AP5M1Q9H0R1 490 aa16.82■□□□□ 0.28
COPS7A-212ENST00000541866 UPF3AQ9H1J1 476 aaKnown RBP16.82■□□□□ 0.28
COPS7A-212ENST00000541866 RNF41Q9H4P4 317 aaPredicted RBP16.82■□□□□ 0.28
COPS7A-212ENST00000541866 GPCPD1Q9NPB8 672 aa16.82■□□□□ 0.28
COPS7A-212ENST00000541866 CYP39A1Q9NYL5 469 aa16.82■□□□□ 0.28
COPS7A-212ENST00000541866 FRMPD2Q68DX3 1309 aaPredicted RBP16.81■□□□□ 0.28
COPS7A-212ENST00000541866 A0A0U1RQG5 324 aaPredicted RBP16.81■□□□□ 0.28
COPS7A-212ENST00000541866 ARVCFO00192 962 aa16.81■□□□□ 0.28
COPS7A-212ENST00000541866 ZNF213O14771 459 aa16.81■□□□□ 0.28
COPS7A-212ENST00000541866 BTNL9Q6UXG8 535 aa16.81■□□□□ 0.28
COPS7A-212ENST00000541866 EEPD1Q7L9B9 569 aa16.81■□□□□ 0.28
COPS7A-212ENST00000541866 RNPC3Q96LT9 517 aaKnown RBP16.81■□□□□ 0.28
COPS7A-212ENST00000541866 RANBP17Q9H2T7 1088 aaKnown RBP16.81■□□□□ 0.28
COPS7A-212ENST00000541866 ADD3Q9UEY8 706 aaKnown RBP16.81■□□□□ 0.28
COPS7A-212ENST00000541866 ZMYM6O95789 1325 aa16.8■□□□□ 0.28
COPS7A-212ENST00000541866 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.8■□□□□ 0.28
COPS7A-212ENST00000541866 TLR3O15455 904 aaKnown RBP16.8■□□□□ 0.28
COPS7A-212ENST00000541866 DYNC1LI2O43237 492 aaPredicted RBP16.8■□□□□ 0.28
COPS7A-212ENST00000541866 ZEB2O60315 1214 aa16.8■□□□□ 0.28
COPS7A-212ENST00000541866 TIMP1P01033 207 aa16.8■□□□□ 0.28
COPS7A-212ENST00000541866 CDK7P50613 346 aa16.8■□□□□ 0.28
COPS7A-212ENST00000541866 SMAD3P84022 425 aaKnown RBP16.8■□□□□ 0.28
COPS7A-212ENST00000541866 BEX3Q00994 111 aa16.8■□□□□ 0.28
COPS7A-212ENST00000541866 IQSEC1Q6DN90 963 aa16.8■□□□□ 0.28
COPS7A-212ENST00000541866 DIAPH3Q9NSV4 1193 aa16.8■□□□□ 0.28
COPS7A-212ENST00000541866 PNMA2Q9UL42 364 aa16.8■□□□□ 0.28
COPS7A-212ENST00000541866 EPHB4P54760 987 aa16.79■□□□□ 0.28
COPS7A-212ENST00000541866 NUCB1Q02818 461 aa16.79■□□□□ 0.28
COPS7A-212ENST00000541866 BAATQ14032 418 aaPredicted RBP16.79■□□□□ 0.28
COPS7A-212ENST00000541866 CWC27Q6UX04 472 aaKnown RBP16.79■□□□□ 0.28
COPS7A-212ENST00000541866 KIAA1211Q6ZU35 1233 aa16.79■□□□□ 0.28
COPS7A-212ENST00000541866 TLK2Q86UE8 772 aa16.79■□□□□ 0.28
COPS7A-212ENST00000541866 PLEKHM2Q8IWE5 1019 aa16.79■□□□□ 0.28
COPS7A-212ENST00000541866 ESR2Q92731 530 aa16.79■□□□□ 0.28
COPS7A-212ENST00000541866 GUCD1Q96NT3 240 aa16.79■□□□□ 0.28
COPS7A-212ENST00000541866 COL25A1Q9BXS0 654 aaPredicted RBP16.79■□□□□ 0.28
COPS7A-212ENST00000541866 LAMA2P24043 3122 aaKnown RBP16.79■□□□□ 0.28
COPS7A-212ENST00000541866 LTBP2Q14767 1821 aa16.79■□□□□ 0.28
COPS7A-212ENST00000541866 PTPDC1A2A3K4 754 aa16.78■□□□□ 0.28
COPS7A-212ENST00000541866 HIP1O00291 1037 aa16.78■□□□□ 0.28
COPS7A-212ENST00000541866 CABYRO75952 493 aa16.78■□□□□ 0.28
COPS7A-212ENST00000541866 IGHDP01880 384 aa16.78■□□□□ 0.28
COPS7A-212ENST00000541866 PDHBP11177 359 aa16.78■□□□□ 0.28
COPS7A-212ENST00000541866 SMPD1P17405 629 aa16.78■□□□□ 0.28
COPS7A-212ENST00000541866 NKX3-2P78367 333 aa16.78■□□□□ 0.28
COPS7A-212ENST00000541866 FSCN1Q16658 493 aaKnown RBP16.78■□□□□ 0.28
COPS7A-212ENST00000541866 CXCL17Q6UXB2 119 aa16.78■□□□□ 0.28
COPS7A-212ENST00000541866 TBC1D10CQ8IV04 446 aa16.78■□□□□ 0.28
COPS7A-212ENST00000541866 FBXO16Q8IX29 292 aaPredicted RBP16.78■□□□□ 0.28
COPS7A-212ENST00000541866 EXOC6Q8TAG9 804 aa16.78■□□□□ 0.28
COPS7A-212ENST00000541866 PURBQ96QR8 312 aaKnown RBP16.78■□□□□ 0.28
COPS7A-212ENST00000541866 SEMA6BQ9H3T3 888 aa16.78■□□□□ 0.28
COPS7A-212ENST00000541866 OSBPL3Q9H4L5 887 aa16.78■□□□□ 0.28
COPS7A-212ENST00000541866 VTA1Q9NP79 307 aa16.78■□□□□ 0.28
COPS7A-212ENST00000541866 PDGFCQ9NRA1 345 aa16.78■□□□□ 0.28
COPS7A-212ENST00000541866 TBX21Q9UL17 535 aa16.78■□□□□ 0.28
COPS7A-212ENST00000541866 GNEQ9Y223 722 aaKnown RBP16.78■□□□□ 0.28
COPS7A-212ENST00000541866 DDX49Q9Y6V7 483 aaKnown RBP16.78■□□□□ 0.28
COPS7A-212ENST00000541866 MCM3APO60318 1980 aa16.78■□□□□ 0.28
COPS7A-212ENST00000541866 CTAGE5O15320 804 aa16.77■□□□□ 0.28
COPS7A-212ENST00000541866 CALML3P27482 149 aa16.77■□□□□ 0.28
COPS7A-212ENST00000541866 ZNF543Q08ER8 600 aa16.77■□□□□ 0.28
COPS7A-212ENST00000541866 PPIGQ13427 754 aaKnown RBP eCLIP16.77■□□□□ 0.28
COPS7A-212ENST00000541866 CCDC178Q5BJE1 867 aa16.77■□□□□ 0.28
COPS7A-212ENST00000541866 MFSD5Q6N075 450 aa16.77■□□□□ 0.28
COPS7A-212ENST00000541866 TAPT1Q6NXT6 567 aa16.77■□□□□ 0.28
COPS7A-212ENST00000541866 RNF207Q6ZRF8 634 aa16.77■□□□□ 0.28
COPS7A-212ENST00000541866 IQCA1Q86XH1 822 aa16.77■□□□□ 0.28
COPS7A-212ENST00000541866 TMEM199Q8N511 208 aa16.77■□□□□ 0.28
COPS7A-212ENST00000541866 MPHOSPH6Q99547 160 aaKnown RBP16.77■□□□□ 0.28
COPS7A-212ENST00000541866 ZKSCAN3Q9BRR0 538 aa16.77■□□□□ 0.28
COPS7A-212ENST00000541866 Q9Y3F1 56 aa16.77■□□□□ 0.28
COPS7A-212ENST00000541866 ASTN1O14525 1302 aa16.76■□□□□ 0.27
COPS7A-212ENST00000541866 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.76■□□□□ 0.27
COPS7A-212ENST00000541866 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.76■□□□□ 0.27
COPS7A-212ENST00000541866 NFIBO00712 420 aa16.76■□□□□ 0.27
COPS7A-212ENST00000541866 NT5C2P49902 561 aa16.76■□□□□ 0.27
COPS7A-212ENST00000541866 ALDH5A1P51649 535 aaPredicted RBP16.76■□□□□ 0.27
COPS7A-212ENST00000541866 ITGA7Q13683 1181 aa16.76■□□□□ 0.27
COPS7A-212ENST00000541866 DGKHQ86XP1 1220 aa16.76■□□□□ 0.27
COPS7A-212ENST00000541866 FAM126BQ8IXS8 530 aa16.76■□□□□ 0.27
COPS7A-212ENST00000541866 PPP1R12CQ9BZL4 782 aa16.76■□□□□ 0.27
COPS7A-212ENST00000541866 VCANP13611 3396 aa16.76■□□□□ 0.27
COPS7A-212ENST00000541866 LOC102724159A0A0B4J2E5 919 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms