RNA–Protein interactions for RNA: ENST00000541852.5

ITM2C-208, Transcript of integral membrane protein 2C, humanhuman

TSL 3

Gene ITM2C, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-208ENST00000541852 CUL9Q8IWT3 2517 aa17.63■□□□□ 0.41
ITM2C-208ENST00000541852 ICAM1P05362 532 aa17.63■□□□□ 0.41
ITM2C-208ENST00000541852 TOP1P11387 765 aaKnown RBP17.63■□□□□ 0.41
ITM2C-208ENST00000541852 MFAP1P55081 439 aaKnown RBP17.63■□□□□ 0.41
ITM2C-208ENST00000541852 RRP1P56182 461 aaKnown RBP17.63■□□□□ 0.41
ITM2C-208ENST00000541852 BTNL9Q6UXG8 535 aa17.63■□□□□ 0.41
ITM2C-208ENST00000541852 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.63■□□□□ 0.41
ITM2C-208ENST00000541852 SOWAHBA6NEL2 793 aa17.62■□□□□ 0.41
ITM2C-208ENST00000541852 FGAP02671 866 aa17.62■□□□□ 0.41
ITM2C-208ENST00000541852 CYP39A1Q9NYL5 469 aa17.62■□□□□ 0.41
ITM2C-208ENST00000541852 CCPG1Q9ULG6 757 aa17.62■□□□□ 0.41
ITM2C-208ENST00000541852 GNEQ9Y223 722 aaKnown RBP17.62■□□□□ 0.41
ITM2C-208ENST00000541852 MCM3APO60318 1980 aa17.62■□□□□ 0.41
ITM2C-208ENST00000541852 UNC80Q8N2C7 3258 aa17.61■□□□□ 0.41
ITM2C-208ENST00000541852 MYADML2A6NDP7 307 aa17.61■□□□□ 0.41
ITM2C-208ENST00000541852 FOXP2O15409 715 aa17.61■□□□□ 0.41
ITM2C-208ENST00000541852 EPHB4P54760 987 aa17.61■□□□□ 0.41
ITM2C-208ENST00000541852 CCDC96Q2M329 555 aa17.61■□□□□ 0.41
ITM2C-208ENST00000541852 MORC4Q8TE76 937 aa17.61■□□□□ 0.41
ITM2C-208ENST00000541852 MPHOSPH6Q99547 160 aaKnown RBP17.61■□□□□ 0.41
ITM2C-208ENST00000541852 RANBP17Q9H2T7 1088 aaKnown RBP17.61■□□□□ 0.41
ITM2C-208ENST00000541852 VTA1Q9NP79 307 aa17.61■□□□□ 0.41
ITM2C-208ENST00000541852 INCENPQ9NQS7 918 aa17.61■□□□□ 0.41
ITM2C-208ENST00000541852 TOMM22Q9NS69 142 aa17.61■□□□□ 0.41
ITM2C-208ENST00000541852 ZMYM6O95789 1325 aa17.61■□□□□ 0.41
ITM2C-208ENST00000541852 CTAGE5O15320 804 aa17.6■□□□□ 0.41
ITM2C-208ENST00000541852 ADCY6O43306 1168 aa17.6■□□□□ 0.41
ITM2C-208ENST00000541852 FSCN1Q16658 493 aaKnown RBP17.6■□□□□ 0.41
ITM2C-208ENST00000541852 VPS53Q5VIR6 699 aa17.6■□□□□ 0.41
ITM2C-208ENST00000541852 TLK2Q86UE8 772 aa17.6■□□□□ 0.41
ITM2C-208ENST00000541852 FAM126BQ8IXS8 530 aa17.6■□□□□ 0.41
ITM2C-208ENST00000541852 SLC43A3Q8NBI5 491 aa17.6■□□□□ 0.41
ITM2C-208ENST00000541852 MAF1Q9H063 256 aa17.6■□□□□ 0.41
ITM2C-208ENST00000541852 MTIF3Q9H2K0 278 aaKnown RBP17.6■□□□□ 0.41
ITM2C-208ENST00000541852 RNF41Q9H4P4 317 aaPredicted RBP17.6■□□□□ 0.41
ITM2C-208ENST00000541852 B4DLN1 442 aa17.59■□□□□ 0.41
ITM2C-208ENST00000541852 DYNC1LI2O43237 492 aaPredicted RBP17.59■□□□□ 0.41
ITM2C-208ENST00000541852 NMT2O60551 498 aa17.59■□□□□ 0.41
ITM2C-208ENST00000541852 CD4P01730 458 aa17.59■□□□□ 0.41
ITM2C-208ENST00000541852 HSPD1P10809 573 aaKnown RBP17.59■□□□□ 0.41
ITM2C-208ENST00000541852 MRPL12P52815 198 aaKnown RBP17.59■□□□□ 0.41
ITM2C-208ENST00000541852 CCDC178Q5BJE1 867 aa17.59■□□□□ 0.41
ITM2C-208ENST00000541852 SYDE2Q5VT97 1194 aa17.59■□□□□ 0.41
ITM2C-208ENST00000541852 PSRC1Q6PGN9 363 aaPredicted RBP17.59■□□□□ 0.41
ITM2C-208ENST00000541852 NSMFQ6X4W1 530 aa17.59■□□□□ 0.41
ITM2C-208ENST00000541852 MFSD6Q6ZSS7 791 aa17.59■□□□□ 0.41
ITM2C-208ENST00000541852 MAFAQ8NHW3 353 aaPredicted RBP17.59■□□□□ 0.41
ITM2C-208ENST00000541852 TMEM47Q9BQJ4 181 aa17.59■□□□□ 0.41
ITM2C-208ENST00000541852 TTYH1Q9H313 450 aaPredicted RBP17.59■□□□□ 0.41
ITM2C-208ENST00000541852 ITGA7Q13683 1181 aa17.58■□□□□ 0.4
ITM2C-208ENST00000541852 MUM1L1Q5H9M0 696 aa17.58■□□□□ 0.4
ITM2C-208ENST00000541852 RRP12Q5JTH9 1297 aaKnown RBP17.58■□□□□ 0.4
ITM2C-208ENST00000541852 TMEM240Q5SV17 173 aa17.58■□□□□ 0.4
ITM2C-208ENST00000541852 TAPT1Q6NXT6 567 aa17.58■□□□□ 0.4
ITM2C-208ENST00000541852 KIAA1211Q6ZU35 1233 aa17.58■□□□□ 0.4
ITM2C-208ENST00000541852 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.58■□□□□ 0.4
ITM2C-208ENST00000541852 RWDD1Q9H446 243 aaPredicted RBP17.58■□□□□ 0.4
ITM2C-208ENST00000541852 MTMR7Q9Y216 660 aa17.58■□□□□ 0.4
ITM2C-208ENST00000541852 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.57■□□□□ 0.4
ITM2C-208ENST00000541852 TRIM6-TRIM34B2RNG4 842 aa17.57■□□□□ 0.4
ITM2C-208ENST00000541852 FOSL2P15408 326 aa17.57■□□□□ 0.4
ITM2C-208ENST00000541852 SMPD1P17405 629 aa17.57■□□□□ 0.4
ITM2C-208ENST00000541852 DNAJB2P25686 324 aa17.57■□□□□ 0.4
ITM2C-208ENST00000541852 BEX3Q00994 111 aa17.57■□□□□ 0.4
ITM2C-208ENST00000541852 DUSP28Q4G0W2 176 aa17.57■□□□□ 0.4
ITM2C-208ENST00000541852 BRDTQ58F21 947 aaPredicted RBP17.57■□□□□ 0.4
ITM2C-208ENST00000541852 AKNAD1Q5T1N1 836 aa17.57■□□□□ 0.4
ITM2C-208ENST00000541852 CXCL17Q6UXB2 119 aa17.57■□□□□ 0.4
ITM2C-208ENST00000541852 RPUSD2Q8IZ73 545 aaKnown RBP17.57■□□□□ 0.4
ITM2C-208ENST00000541852 CHMP4CQ96CF2 233 aa17.57■□□□□ 0.4
ITM2C-208ENST00000541852 FAM227BQ96M60 508 aa17.57■□□□□ 0.4
ITM2C-208ENST00000541852 CRBNQ96SW2 442 aa17.57■□□□□ 0.4
ITM2C-208ENST00000541852 POLR3EQ9NVU0 708 aa17.57■□□□□ 0.4
ITM2C-208ENST00000541852 ASTN1O14525 1302 aa17.56■□□□□ 0.4
ITM2C-208ENST00000541852 SUPT20HL2P0C7V6 817 aa17.56■□□□□ 0.4
ITM2C-208ENST00000541852 CSF2RAP15509 400 aa17.56■□□□□ 0.4
ITM2C-208ENST00000541852 SNAP25P60880 206 aa17.56■□□□□ 0.4
ITM2C-208ENST00000541852 IRX5P78411 483 aaPredicted RBP17.56■□□□□ 0.4
ITM2C-208ENST00000541852 BAATQ14032 418 aaPredicted RBP17.56■□□□□ 0.4
ITM2C-208ENST00000541852 GPATCH4Q5T3I0 446 aaKnown RBP17.56■□□□□ 0.4
ITM2C-208ENST00000541852 RASIP1Q5U651 963 aa17.56■□□□□ 0.4
ITM2C-208ENST00000541852 DNERQ8NFT8 737 aa17.56■□□□□ 0.4
ITM2C-208ENST00000541852 MYLIPQ8WY64 445 aa17.56■□□□□ 0.4
ITM2C-208ENST00000541852 ESR2Q92731 530 aa17.56■□□□□ 0.4
ITM2C-208ENST00000541852 TIFAQ96CG3 184 aa17.56■□□□□ 0.4
ITM2C-208ENST00000541852 ZNF576Q9H609 170 aa17.56■□□□□ 0.4
ITM2C-208ENST00000541852 IL23AQ9NPF7 189 aa17.56■□□□□ 0.4
ITM2C-208ENST00000541852 CCDC171Q6TFL3 1326 aa17.55■□□□□ 0.4
ITM2C-208ENST00000541852 A0A0D9SFI3 127 aa17.55■□□□□ 0.4
ITM2C-208ENST00000541852 RBM47A0AV96 593 aaKnown RBP17.55■□□□□ 0.4
ITM2C-208ENST00000541852 ZNF213O14771 459 aa17.55■□□□□ 0.4
ITM2C-208ENST00000541852 NKRFO15226 690 aaKnown RBP eCLIP17.55■□□□□ 0.4
ITM2C-208ENST00000541852 KPNA6O60684 536 aa17.55■□□□□ 0.4
ITM2C-208ENST00000541852 FGBP02675 491 aa17.55■□□□□ 0.4
ITM2C-208ENST00000541852 PDHBP11177 359 aa17.55■□□□□ 0.4
ITM2C-208ENST00000541852 SLC16A2P36021 539 aa17.55■□□□□ 0.4
ITM2C-208ENST00000541852 CPT1AP50416 773 aa17.55■□□□□ 0.4
ITM2C-208ENST00000541852 TTBK2Q6IQ55 1244 aa17.55■□□□□ 0.4
ITM2C-208ENST00000541852 ZNF365Q70YC5 407 aa17.55■□□□□ 0.4
ITM2C-208ENST00000541852 C16orf59Q7L2K0 433 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms