RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 NOC4LQ9BVI4 516 aaKnown RBP16.85■□□□□ 0.29
VARS2-211ENST00000541562 DBNDD1Q9H9R9 158 aa16.85■□□□□ 0.29
VARS2-211ENST00000541562 ABCB6Q9NP58 842 aa16.85■□□□□ 0.29
VARS2-211ENST00000541562 LRRC4BQ9NT99 713 aa16.85■□□□□ 0.29
VARS2-211ENST00000541562 C4AP0C0L4 1744 aa16.85■□□□□ 0.29
VARS2-211ENST00000541562 C4BP0C0L5 1744 aa16.85■□□□□ 0.29
VARS2-211ENST00000541562 SPATA31A5Q5VU36 1347 aa16.85■□□□□ 0.29
VARS2-211ENST00000541562 SPATA31A7Q8IWB4 1347 aa16.85■□□□□ 0.29
VARS2-211ENST00000541562 GTPBP6O43824 516 aaPredicted RBP16.84■□□□□ 0.29
VARS2-211ENST00000541562 DDAH1O94760 285 aa16.84■□□□□ 0.29
VARS2-211ENST00000541562 MAP3K9P80192 1104 aa16.84■□□□□ 0.29
VARS2-211ENST00000541562 CC2D1AQ6P1N0 951 aaPredicted RBP16.84■□□□□ 0.29
VARS2-211ENST00000541562 ZNF579Q8NAF0 562 aaKnown RBP16.84■□□□□ 0.29
VARS2-211ENST00000541562 PHLPP2Q6ZVD8 1323 aa16.84■□□□□ 0.29
VARS2-211ENST00000541562 MYH15Q9Y2K3 1946 aa16.84■□□□□ 0.29
VARS2-211ENST00000541562 SLC37A4O43826 429 aa16.84■□□□□ 0.29
VARS2-211ENST00000541562 ATP1A1P05023 1023 aaKnown RBP16.84■□□□□ 0.29
VARS2-211ENST00000541562 AKR1B1P15121 316 aa16.84■□□□□ 0.29
VARS2-211ENST00000541562 UBXN2AP68543 259 aa16.84■□□□□ 0.29
VARS2-211ENST00000541562 SLC7A5Q01650 507 aa16.84■□□□□ 0.29
VARS2-211ENST00000541562 TUBGCP2Q9BSJ2 902 aa16.84■□□□□ 0.29
VARS2-211ENST00000541562 EPHB6O15197 1021 aa16.84■□□□□ 0.29
VARS2-211ENST00000541562 TM4SF1P30408 202 aa16.84■□□□□ 0.29
VARS2-211ENST00000541562 STAT3P40763 770 aa16.84■□□□□ 0.29
VARS2-211ENST00000541562 VSNL1P62760 191 aa16.84■□□□□ 0.29
VARS2-211ENST00000541562 ZYXQ15942 572 aaKnown RBP16.84■□□□□ 0.29
VARS2-211ENST00000541562 LONRF2Q1L5Z9 754 aa16.84■□□□□ 0.29
VARS2-211ENST00000541562 DEF6Q9H4E7 631 aa16.84■□□□□ 0.29
VARS2-211ENST00000541562 EPN1Q9Y6I3 576 aaPredicted RBP16.84■□□□□ 0.29
VARS2-211ENST00000541562 FAM237AA0A1B0GTK4 181 aa16.83■□□□□ 0.29
VARS2-211ENST00000541562 NCK2O43639 380 aa16.83■□□□□ 0.29
VARS2-211ENST00000541562 TBC1D8O95759 1140 aa16.83■□□□□ 0.29
VARS2-211ENST00000541562 SPTY2D1Q68D10 685 aaPredicted RBP16.83■□□□□ 0.29
VARS2-211ENST00000541562 MLXIPQ9HAP2 919 aa16.83■□□□□ 0.29
VARS2-211ENST00000541562 CD209Q9NNX6 404 aa16.83■□□□□ 0.29
VARS2-211ENST00000541562 ANAPC4Q9UJX5 808 aa16.83■□□□□ 0.29
VARS2-211ENST00000541562 H3BQF6 201 aa16.83■□□□□ 0.28
VARS2-211ENST00000541562 TRIM37O94972 964 aa16.83■□□□□ 0.28
VARS2-211ENST00000541562 C2CD5Q86YS7 1000 aa16.83■□□□□ 0.28
VARS2-211ENST00000541562 ZFPM1Q8IX07 1006 aa16.83■□□□□ 0.28
VARS2-211ENST00000541562 POLLQ9UGP5 575 aa16.83■□□□□ 0.28
VARS2-211ENST00000541562 MYH8P13535 1937 aa16.83■□□□□ 0.28
VARS2-211ENST00000541562 EFCAB8A8MWE9 144 aa16.83■□□□□ 0.28
VARS2-211ENST00000541562 STXBP3O00186 592 aa16.83■□□□□ 0.28
VARS2-211ENST00000541562 TDRD12Q587J7 1177 aaKnown RBP16.83■□□□□ 0.28
VARS2-211ENST00000541562 ZNF658Q5TYW1 1059 aaPredicted RBP16.83■□□□□ 0.28
VARS2-211ENST00000541562 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.83■□□□□ 0.28
VARS2-211ENST00000541562 KCNK18Q7Z418 384 aa16.83■□□□□ 0.28
VARS2-211ENST00000541562 CNOT6LQ96LI5 555 aaKnown RBP16.83■□□□□ 0.28
VARS2-211ENST00000541562 PLEKHG2Q9H7P9 1386 aa16.83■□□□□ 0.28
VARS2-211ENST00000541562 PSMA7O14818 248 aa16.82■□□□□ 0.28
VARS2-211ENST00000541562 NT5DC1Q5TFE4 455 aa16.82■□□□□ 0.28
VARS2-211ENST00000541562 CDKAL1Q5VV42 579 aa16.82■□□□□ 0.28
VARS2-211ENST00000541562 BMP2KQ9NSY1 1161 aaPredicted RBP16.82■□□□□ 0.28
VARS2-211ENST00000541562 SH3RF1Q7Z6J0 888 aa16.82■□□□□ 0.28
VARS2-211ENST00000541562 ANKRD2Q9GZV1 360 aa16.82■□□□□ 0.28
VARS2-211ENST00000541562 IKZF4Q9H2S9 585 aa16.82■□□□□ 0.28
VARS2-211ENST00000541562 GOLPH3Q9H4A6 298 aa16.82■□□□□ 0.28
VARS2-211ENST00000541562 CICQ96RK0 1608 aaPredicted RBP16.82■□□□□ 0.28
VARS2-211ENST00000541562 RPS6KA4O75676 772 aa16.82■□□□□ 0.28
VARS2-211ENST00000541562 C2orf54Q08AI8 447 aa16.82■□□□□ 0.28
VARS2-211ENST00000541562 CNGA4Q8IV77 575 aa16.82■□□□□ 0.28
VARS2-211ENST00000541562 GTPBP4Q9BZE4 634 aaKnown RBP16.82■□□□□ 0.28
VARS2-211ENST00000541562 PKD2L1Q9P0L9 805 aa16.82■□□□□ 0.28
VARS2-211ENST00000541562 LRWD1Q9UFC0 647 aa16.82■□□□□ 0.28
VARS2-211ENST00000541562 SF3A3Q12874 501 aaKnown RBP eCLIP16.81■□□□□ 0.281e-6■□□□□ 9.9
VARS2-211ENST00000541562 ZNF804AQ7Z570 1209 aa16.81■□□□□ 0.28
VARS2-211ENST00000541562 RRP36Q96EU6 259 aaKnown RBP16.81■□□□□ 0.28
VARS2-211ENST00000541562 NYXQ9GZU5 481 aa16.81■□□□□ 0.28
VARS2-211ENST00000541562 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.81■□□□□ 0.28
VARS2-211ENST00000541562 PACSIN2Q9UNF0 486 aaPredicted RBP16.81■□□□□ 0.28
VARS2-211ENST00000541562 TTF2Q9UNY4 1162 aaKnown RBP16.81■□□□□ 0.28
VARS2-211ENST00000541562 SFI1A8K8P3 1242 aa16.81■□□□□ 0.28
VARS2-211ENST00000541562 GDF11O95390 407 aa16.81■□□□□ 0.28
VARS2-211ENST00000541562 CALML3P27482 149 aa16.81■□□□□ 0.28
VARS2-211ENST00000541562 CYP4A11Q02928 519 aa16.81■□□□□ 0.28
VARS2-211ENST00000541562 EZH2Q15910 746 aaKnown RBP16.81■□□□□ 0.28
VARS2-211ENST00000541562 PRR5LQ6MZQ0 368 aa16.81■□□□□ 0.28
VARS2-211ENST00000541562 CLEC4GQ6UXB4 293 aa16.81■□□□□ 0.28
VARS2-211ENST00000541562 TRIML1Q8N9V2 468 aa16.81■□□□□ 0.28
VARS2-211ENST00000541562 SNX29Q8TEQ0 813 aa16.81■□□□□ 0.28
VARS2-211ENST00000541562 MMS19Q96T76 1030 aa16.81■□□□□ 0.28
VARS2-211ENST00000541562 FGFBP2Q9BYJ0 223 aa16.81■□□□□ 0.28
VARS2-211ENST00000541562 CENPFP49454 3210 aa16.81■□□□□ 0.28
VARS2-211ENST00000541562 LRP6O75581 1613 aa16.81■□□□□ 0.28
VARS2-211ENST00000541562 NDUFA10O95299 355 aa16.81■□□□□ 0.28
VARS2-211ENST00000541562 NFIAQ12857 509 aa16.81■□□□□ 0.28
VARS2-211ENST00000541562 NONOQ15233 471 aaKnown RBP eCLIP16.81■□□□□ 0.28
VARS2-211ENST00000541562 RRAGAQ7L523 313 aa16.81■□□□□ 0.28
VARS2-211ENST00000541562 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.81■□□□□ 0.28
VARS2-211ENST00000541562 REXO2Q9Y3B8 237 aaKnown RBP16.81■□□□□ 0.28
VARS2-211ENST00000541562 UBR2Q8IWV8 1755 aa16.8■□□□□ 0.28
VARS2-211ENST00000541562 USP17L10C9JJH3 530 aa16.8■□□□□ 0.28
VARS2-211ENST00000541562 KRT18P05783 430 aaKnown RBP16.8■□□□□ 0.28
VARS2-211ENST00000541562 STIM1Q13586 685 aa16.8■□□□□ 0.28
VARS2-211ENST00000541562 PLS1Q14651 629 aa16.8■□□□□ 0.28
VARS2-211ENST00000541562 MB21D1Q8N884 522 aa16.8■□□□□ 0.28
VARS2-211ENST00000541562 C4orf32Q8N8J7 132 aa16.8■□□□□ 0.28
VARS2-211ENST00000541562 NAPGQ99747 312 aaPredicted RBP16.8■□□□□ 0.28
VARS2-211ENST00000541562 DDX4Q9NQI0 724 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms