RNA–Protein interactions for RNA: ENST00000541488.1

PRKDC-210, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-210ENST00000541488 KCTD3Q9Y597 815 aa6.55□□□□□ -1.36
PRKDC-210ENST00000541488 A0A1W2PQ27 194 aa6.54□□□□□ -1.36
PRKDC-210ENST00000541488 A0A1W2PQ64 194 aa6.54□□□□□ -1.36
PRKDC-210ENST00000541488 A0A1W2PQC6 194 aa6.54□□□□□ -1.36
PRKDC-210ENST00000541488 A0A1W2PQD8 194 aa6.54□□□□□ -1.36
PRKDC-210ENST00000541488 WTIPA6NIX2 430 aaPredicted RBP6.54□□□□□ -1.36
PRKDC-210ENST00000541488 NUDT19A8MXV4 375 aa6.54□□□□□ -1.36
PRKDC-210ENST00000541488 OVOL3O00110 214 aa6.54□□□□□ -1.36
PRKDC-210ENST00000541488 VAMP4O75379 141 aa6.54□□□□□ -1.36
PRKDC-210ENST00000541488 TCEAL1Q15170 157 aa6.54□□□□□ -1.36
PRKDC-210ENST00000541488 DPY19L1Q2PZI1 675 aa6.54□□□□□ -1.36
PRKDC-210ENST00000541488 ANKRD39Q53RE8 183 aa6.54□□□□□ -1.36
PRKDC-210ENST00000541488 HEATR6Q6AI08 1181 aaKnown RBP6.54□□□□□ -1.36
PRKDC-210ENST00000541488 SLCO6A1Q86UG4 719 aa6.54□□□□□ -1.36
PRKDC-210ENST00000541488 RASGRP4Q8TDF6 673 aa6.54□□□□□ -1.36
PRKDC-210ENST00000541488 FCRL3Q96P31 734 aaPredicted RBP6.54□□□□□ -1.36
PRKDC-210ENST00000541488 FHOD1Q9Y613 1164 aa6.54□□□□□ -1.36
PRKDC-210ENST00000541488 AKAP8O43823 692 aaKnown RBP6.53□□□□□ -1.36
PRKDC-210ENST00000541488 SEMA7AO75326 666 aa6.53□□□□□ -1.36
PRKDC-210ENST00000541488 EPHX1P07099 455 aa6.53□□□□□ -1.36
PRKDC-210ENST00000541488 MSL3P1P0C860 447 aa6.53□□□□□ -1.36
PRKDC-210ENST00000541488 PNLIPP16233 465 aa6.53□□□□□ -1.36
PRKDC-210ENST00000541488 VIPR1P32241 457 aa6.53□□□□□ -1.36
PRKDC-210ENST00000541488 GJA8P48165 433 aa6.53□□□□□ -1.36
PRKDC-210ENST00000541488 CYP4F8P98187 520 aa6.53□□□□□ -1.36
PRKDC-210ENST00000541488 SLC7A5Q01650 507 aa6.53□□□□□ -1.36
PRKDC-210ENST00000541488 EFEMP1Q12805 493 aa6.53□□□□□ -1.36
PRKDC-210ENST00000541488 RAB3GAP1Q15042 981 aa6.53□□□□□ -1.36
PRKDC-210ENST00000541488 SPATS1Q496A3 300 aa6.53□□□□□ -1.36
PRKDC-210ENST00000541488 JAMLQ86YT9 394 aa6.53□□□□□ -1.36
PRKDC-210ENST00000541488 FAM169BQ8N8A8 192 aa6.53□□□□□ -1.36
PRKDC-210ENST00000541488 FEZF2Q8TBJ5 459 aa6.53□□□□□ -1.36
PRKDC-210ENST00000541488 SHDQ96IW2 340 aa6.53□□□□□ -1.36
PRKDC-210ENST00000541488 SPATA32Q96LK8 384 aa6.53□□□□□ -1.36
PRKDC-210ENST00000541488 TGIF2Q9GZN2 237 aa6.53□□□□□ -1.36
PRKDC-210ENST00000541488 GCM1Q9NP62 436 aa6.53□□□□□ -1.36
PRKDC-210ENST00000541488 CRTAC1Q9NQ79 661 aa6.53□□□□□ -1.36
PRKDC-210ENST00000541488 SIRT5Q9NXA8 310 aa6.53□□□□□ -1.36
PRKDC-210ENST00000541488 PRR13Q9NZ81 148 aa6.53□□□□□ -1.36
PRKDC-210ENST00000541488 MRVI1Q9Y6F6 885 aa6.53□□□□□ -1.36
PRKDC-210ENST00000541488 STXBP3O00186 592 aa6.52□□□□□ -1.37
PRKDC-210ENST00000541488 TACR1P25103 407 aa6.52□□□□□ -1.37
PRKDC-210ENST00000541488 ARL4AP40617 200 aa6.52□□□□□ -1.37
PRKDC-210ENST00000541488 EPHB3P54753 998 aa6.52□□□□□ -1.37
PRKDC-210ENST00000541488 KIAA1211LQ6NV74 962 aa6.52□□□□□ -1.37
PRKDC-210ENST00000541488 TMEM151BQ8IW70 566 aa6.52□□□□□ -1.37
PRKDC-210ENST00000541488 MCMBPQ9BTE3 642 aa6.52□□□□□ -1.37
PRKDC-210ENST00000541488 SUGT1Q9Y2Z0 365 aa6.52□□□□□ -1.37
PRKDC-210ENST00000541488 SF3B6Q9Y3B4 125 aaKnown RBP6.52□□□□□ -1.37
PRKDC-210ENST00000541488 TEX51A0A1B0GUA7 166 aa6.51□□□□□ -1.37
PRKDC-210ENST00000541488 A0A1W2PQ45 241 aaPredicted RBP6.51□□□□□ -1.37
PRKDC-210ENST00000541488 A0A1W2PQY0 241 aa6.51□□□□□ -1.37
PRKDC-210ENST00000541488 RFXAPO00287 272 aa6.51□□□□□ -1.37
PRKDC-210ENST00000541488 FGF10O15520 208 aaPredicted RBP6.51□□□□□ -1.37
PRKDC-210ENST00000541488 PEX10O60683 326 aa6.51□□□□□ -1.37
PRKDC-210ENST00000541488 ENDOUP21128 410 aaKnown RBP6.51□□□□□ -1.37
PRKDC-210ENST00000541488 ERCC5P28715 1186 aaPredicted RBP6.51□□□□□ -1.37
PRKDC-210ENST00000541488 NOP2P46087 812 aaKnown RBP6.51□□□□□ -1.37
PRKDC-210ENST00000541488 POU4F1Q01851 419 aa6.51□□□□□ -1.37
PRKDC-210ENST00000541488 SSPNQ14714 243 aa6.51□□□□□ -1.37
PRKDC-210ENST00000541488 TMC6Q7Z403 805 aa6.51□□□□□ -1.37
PRKDC-210ENST00000541488 PANK1Q8TE04 598 aa6.51□□□□□ -1.37
PRKDC-210ENST00000541488 KLHL6Q8WZ60 621 aa6.51□□□□□ -1.37
PRKDC-210ENST00000541488 KLHL25Q9H0H3 589 aa6.51□□□□□ -1.37
PRKDC-210ENST00000541488 PHAXQ9H814 394 aaKnown RBP6.51□□□□□ -1.37
PRKDC-210ENST00000541488 MBD1Q9UIS9 605 aaPredicted RBP6.51□□□□□ -1.37
PRKDC-210ENST00000541488 SLC12A7Q9Y666 1083 aa6.51□□□□□ -1.37
PRKDC-210ENST00000541488 MPOP05164 745 aa6.5□□□□□ -1.37
PRKDC-210ENST00000541488 NCKAP1LP55160 1127 aa6.5□□□□□ -1.37
PRKDC-210ENST00000541488 MVKQ03426 396 aa6.5□□□□□ -1.37
PRKDC-210ENST00000541488 HLA-DQA1Q5Y7H0 255 aa6.5□□□□□ -1.37
PRKDC-210ENST00000541488 VHLLQ6RSH7 139 aa6.5□□□□□ -1.37
PRKDC-210ENST00000541488 ZDHHC14Q8IZN3 488 aa6.5□□□□□ -1.37
PRKDC-210ENST00000541488 OR6P1Q8NGX9 317 aa6.5□□□□□ -1.37
PRKDC-210ENST00000541488 PPP1R14AQ96A00 147 aa6.5□□□□□ -1.37
PRKDC-210ENST00000541488 LGR4Q9BXB1 951 aa6.5□□□□□ -1.37
PRKDC-210ENST00000541488 GBP3Q9H0R5 595 aa6.5□□□□□ -1.37
PRKDC-210ENST00000541488 CAPN10Q9HC96 672 aa6.5□□□□□ -1.37
PRKDC-210ENST00000541488 WHRNQ9P202 907 aa6.5□□□□□ -1.37
PRKDC-210ENST00000541488 KLHL14Q9P2G3 628 aa6.5□□□□□ -1.37
PRKDC-210ENST00000541488 CCDC9Q9Y3X0 531 aaKnown RBP6.5□□□□□ -1.37
PRKDC-210ENST00000541488 A0A1W2PQJ5 194 aa6.49□□□□□ -1.37
PRKDC-210ENST00000541488 PI3P19957 117 aa6.49□□□□□ -1.37
PRKDC-210ENST00000541488 ERVFRD-1P60508 538 aa6.49□□□□□ -1.37
PRKDC-210ENST00000541488 LAPTM5Q13571 262 aa6.49□□□□□ -1.37
PRKDC-210ENST00000541488 PTCHD1Q96NR3 888 aa6.49□□□□□ -1.37
PRKDC-210ENST00000541488 CNTD2Q9H8S5 307 aa6.49□□□□□ -1.37
PRKDC-210ENST00000541488 RXFP1Q9HBX9 757 aa6.49□□□□□ -1.37
PRKDC-210ENST00000541488 ACSL6Q9UKU0 697 aa6.49□□□□□ -1.37
PRKDC-210ENST00000541488 HCFC2Q9Y5Z7 792 aa6.49□□□□□ -1.37
PRKDC-210ENST00000541488 PPM1BO75688 479 aa6.48□□□□□ -1.37
PRKDC-210ENST00000541488 BICRALQ6AI39 1079 aa6.48□□□□□ -1.37
PRKDC-210ENST00000541488 RPTNQ6XPR3 784 aa6.48□□□□□ -1.37
PRKDC-210ENST00000541488 CPNE8Q86YQ8 564 aa6.48□□□□□ -1.37
PRKDC-210ENST00000541488 C19orf47Q8N9M1 422 aaKnown RBP6.48□□□□□ -1.37
PRKDC-210ENST00000541488 SEC16BQ96JE7 1060 aa6.48□□□□□ -1.37
PRKDC-210ENST00000541488 TNFRSF12AQ9NP84 129 aa6.48□□□□□ -1.37
PRKDC-210ENST00000541488 APEX2Q9UBZ4 518 aa6.48□□□□□ -1.37
PRKDC-210ENST00000541488 CGGBP1Q9UFW8 167 aaPredicted RBP6.48□□□□□ -1.37
PRKDC-210ENST00000541488 MYRFQ9Y2G1 1151 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms