RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 FAM47CQ5HY64 1035 aa16.7■□□□□ 0.26
HMGA2-210ENST00000541363 USP26Q9BXU7 913 aa16.7■□□□□ 0.26
HMGA2-210ENST00000541363 FGFR1OP2Q9NVK5 253 aa16.7■□□□□ 0.26
HMGA2-210ENST00000541363 SPATA17Q96L03 361 aa16.7■□□□□ 0.26
HMGA2-210ENST00000541363 KDM2BQ8NHM5 1336 aa16.7■□□□□ 0.26
HMGA2-210ENST00000541363 TLR3O15455 904 aaKnown RBP16.7■□□□□ 0.26
HMGA2-210ENST00000541363 ANXA1P04083 346 aa16.7■□□□□ 0.26
HMGA2-210ENST00000541363 YWHAHQ04917 246 aaPredicted RBP16.7■□□□□ 0.26
HMGA2-210ENST00000541363 STX18Q9P2W9 335 aaKnown RBP16.7■□□□□ 0.26
HMGA2-210ENST00000541363 KCNJ18B7U540 433 aa16.7■□□□□ 0.26
HMGA2-210ENST00000541363 KCNJ12Q14500 433 aa16.7■□□□□ 0.26
HMGA2-210ENST00000541363 TRIM45Q9H8W5 580 aaPredicted RBP16.7■□□□□ 0.26
HMGA2-210ENST00000541363 CCT5P48643 541 aa16.7■□□□□ 0.26
HMGA2-210ENST00000541363 FOXD4Q12950 439 aaPredicted RBP16.7■□□□□ 0.26
HMGA2-210ENST00000541363 PPARGP37231 505 aaPredicted RBP16.7■□□□□ 0.26
HMGA2-210ENST00000541363 CCDC85BQ15834 202 aaPredicted RBP16.7■□□□□ 0.26
HMGA2-210ENST00000541363 GNPTABQ3T906 1256 aa16.7■□□□□ 0.26
HMGA2-210ENST00000541363 TCP11Q8WWU5 503 aa16.7■□□□□ 0.26
HMGA2-210ENST00000541363 ZNF212Q9UDV6 495 aa16.7■□□□□ 0.26
HMGA2-210ENST00000541363 MRFAP1Q9Y605 127 aa16.7■□□□□ 0.26
HMGA2-210ENST00000541363 TCP1P17987 556 aaKnown RBP16.69■□□□□ 0.26
HMGA2-210ENST00000541363 PMS1P54277 932 aaKnown RBP16.69■□□□□ 0.26
HMGA2-210ENST00000541363 KIF19Q2TAC6 998 aa16.69■□□□□ 0.26
HMGA2-210ENST00000541363 ACRBPQ8NEB7 543 aa16.69■□□□□ 0.26
HMGA2-210ENST00000541363 OR9Q1Q8NGQ5 310 aa16.69■□□□□ 0.26
HMGA2-210ENST00000541363 NUDCD1Q96RS6 583 aa16.69■□□□□ 0.26
HMGA2-210ENST00000541363 SLC8A2Q9UPR5 921 aa16.69■□□□□ 0.26
HMGA2-210ENST00000541363 TOM1L1O75674 476 aa16.69■□□□□ 0.26
HMGA2-210ENST00000541363 STX19Q8N4C7 294 aa16.69■□□□□ 0.26
HMGA2-210ENST00000541363 TSC22D3Q99576 134 aa16.69■□□□□ 0.26
HMGA2-210ENST00000541363 DISC1Q9NRI5 854 aa16.69■□□□□ 0.26
HMGA2-210ENST00000541363 PATL1Q86TB9 770 aaKnown RBP16.69■□□□□ 0.26
HMGA2-210ENST00000541363 OR8K1Q8NGG5 319 aa16.69■□□□□ 0.26
HMGA2-210ENST00000541363 SNX19Q92543 992 aa16.69■□□□□ 0.26
HMGA2-210ENST00000541363 NAF1Q96HR8 494 aaKnown RBP16.69■□□□□ 0.26
HMGA2-210ENST00000541363 EFCAB8A8MWE9 144 aa16.69■□□□□ 0.26
HMGA2-210ENST00000541363 SOX5P35711 763 aa16.69■□□□□ 0.26
HMGA2-210ENST00000541363 DEPDC1BQ8WUY9 529 aa16.69■□□□□ 0.26
HMGA2-210ENST00000541363 WASLO00401 505 aaPredicted RBP16.69■□□□□ 0.26
HMGA2-210ENST00000541363 TCIRG1Q13488 830 aa16.69■□□□□ 0.26
HMGA2-210ENST00000541363 TRIM67Q6ZTA4 783 aa16.69■□□□□ 0.26
HMGA2-210ENST00000541363 ZBTB18Q99592 522 aa16.69■□□□□ 0.26
HMGA2-210ENST00000541363 ING2Q9H160 280 aa16.69■□□□□ 0.26
HMGA2-210ENST00000541363 SERPINB2P05120 415 aa16.69■□□□□ 0.26
HMGA2-210ENST00000541363 ADKP55263 362 aaKnown RBP16.69■□□□□ 0.26
HMGA2-210ENST00000541363 PPP2R5BQ15173 497 aa16.69■□□□□ 0.26
HMGA2-210ENST00000541363 TTC19Q6DKK2 380 aaPredicted RBP16.69■□□□□ 0.26
HMGA2-210ENST00000541363 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.69■□□□□ 0.26
HMGA2-210ENST00000541363 POLE3Q9NRF9 147 aa16.69■□□□□ 0.26
HMGA2-210ENST00000541363 PA2G4Q9UQ80 394 aaKnown RBP16.69■□□□□ 0.26
HMGA2-210ENST00000541363 SNX5Q9Y5X3 404 aa16.69■□□□□ 0.26
HMGA2-210ENST00000541363 SLC4A1P02730 911 aa16.68■□□□□ 0.26
HMGA2-210ENST00000541363 SZRD1Q7Z422 152 aa16.68■□□□□ 0.26
HMGA2-210ENST00000541363 TFCP2L1Q9NZI6 479 aa16.68■□□□□ 0.26
HMGA2-210ENST00000541363 FAM83GA6ND36 823 aa16.68■□□□□ 0.26
HMGA2-210ENST00000541363 CFBP00751 764 aa16.68■□□□□ 0.26
HMGA2-210ENST00000541363 HDAC4P56524 1084 aa16.68■□□□□ 0.26
HMGA2-210ENST00000541363 OCRLQ01968 901 aa16.68■□□□□ 0.26
HMGA2-210ENST00000541363 MORC3Q14149 939 aa16.68■□□□□ 0.26
HMGA2-210ENST00000541363 CAPRIN1Q14444 709 aaKnown RBP16.68■□□□□ 0.26
HMGA2-210ENST00000541363 DNAAF3Q8N9W5 541 aa16.68■□□□□ 0.26
HMGA2-210ENST00000541363 NCLNQ969V3 563 aa16.68■□□□□ 0.26
HMGA2-210ENST00000541363 MCF2LO15068 1137 aa16.68■□□□□ 0.26
HMGA2-210ENST00000541363 CCDC184Q52MB2 194 aa16.68■□□□□ 0.26
HMGA2-210ENST00000541363 SESTD1Q86VW0 696 aa16.68■□□□□ 0.26
HMGA2-210ENST00000541363 CPXCR1Q8N123 301 aa16.68■□□□□ 0.26
HMGA2-210ENST00000541363 UHMK1Q8TAS1 419 aaKnown RBP16.68■□□□□ 0.26
HMGA2-210ENST00000541363 FAM170AA1A519 330 aa16.68■□□□□ 0.26
HMGA2-210ENST00000541363 GPBP1Q86WP2 473 aa16.68■□□□□ 0.26
HMGA2-210ENST00000541363 MLXIPQ9HAP2 919 aa16.68■□□□□ 0.26
HMGA2-210ENST00000541363 MYOCDQ8IZQ8 938 aa16.68■□□□□ 0.26
HMGA2-210ENST00000541363 ENOX1Q8TC92 643 aaKnown RBP16.68■□□□□ 0.26
HMGA2-210ENST00000541363 EPAS1Q99814 870 aa16.68■□□□□ 0.26
HMGA2-210ENST00000541363 SYTL2Q9HCH5 934 aa16.68■□□□□ 0.26
HMGA2-210ENST00000541363 ABCF3Q9NUQ8 709 aa16.68■□□□□ 0.26
HMGA2-210ENST00000541363 PANK4Q9NVE7 773 aa16.68■□□□□ 0.26
HMGA2-210ENST00000541363 NFKBIL1Q9UBC1 381 aaPredicted RBP16.68■□□□□ 0.26
HMGA2-210ENST00000541363 ZNF233A6NK53 670 aa16.68■□□□□ 0.26
HMGA2-210ENST00000541363 E2F6O75461 281 aa16.68■□□□□ 0.26
HMGA2-210ENST00000541363 E2F5Q15329 346 aa16.68■□□□□ 0.26
HMGA2-210ENST00000541363 MCF2L2Q86YR7 1114 aa16.68■□□□□ 0.26
HMGA2-210ENST00000541363 TAB3Q8N5C8 712 aaPredicted RBP16.68■□□□□ 0.26
HMGA2-210ENST00000541363 K7ENM7 598 aa16.68■□□□□ 0.26
HMGA2-210ENST00000541363 ACTN1P12814 892 aa16.68■□□□□ 0.26
HMGA2-210ENST00000541363 BLZF1Q9H2G9 400 aa16.68■□□□□ 0.26
HMGA2-210ENST00000541363 INTUQ9ULD6 942 aa16.68■□□□□ 0.26
HMGA2-210ENST00000541363 MID2Q9UJV3 735 aa16.67■□□□□ 0.26
HMGA2-210ENST00000541363 STRIP2Q9ULQ0 834 aa16.67■□□□□ 0.26
HMGA2-210ENST00000541363 TMEM191BP0C7N4 346 aa16.67■□□□□ 0.26
HMGA2-210ENST00000541363 SLFN12Q8IYM2 578 aa16.67■□□□□ 0.26
HMGA2-210ENST00000541363 TMED2Q15363 201 aa16.67■□□□□ 0.26
HMGA2-210ENST00000541363 N4BP2L2Q92802 583 aaPredicted RBP16.67■□□□□ 0.26
HMGA2-210ENST00000541363 PMLP29590 882 aa16.67■□□□□ 0.26
HMGA2-210ENST00000541363 PTK2BQ14289 1009 aa16.67■□□□□ 0.26
HMGA2-210ENST00000541363 FGD5Q6ZNL6 1462 aa16.67■□□□□ 0.26
HMGA2-210ENST00000541363 RALGAPBQ86X10 1494 aa16.67■□□□□ 0.26
HMGA2-210ENST00000541363 MTBPQ96DY7 904 aa16.67■□□□□ 0.26
HMGA2-210ENST00000541363 SUGT1Q9Y2Z0 365 aa16.67■□□□□ 0.26
HMGA2-210ENST00000541363 IFNAR2P48551 515 aa16.67■□□□□ 0.26
HMGA2-210ENST00000541363 SPOPLQ6IQ16 392 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms