RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 RNF187Q5TA31 235 aaPredicted RBP16.56■□□□□ 0.24
AC005840.4-201ENST00000541242 MEX3CQ5U5Q3 659 aaKnown RBP16.56■□□□□ 0.24
AC005840.4-201ENST00000541242 NFRKBQ6P4R8 1299 aa16.56■□□□□ 0.24
AC005840.4-201ENST00000541242 ZKSCAN4Q969J2 545 aaPredicted RBP16.56■□□□□ 0.24
AC005840.4-201ENST00000541242 MLXIPQ9HAP2 919 aa16.56■□□□□ 0.24
AC005840.4-201ENST00000541242 LRWD1Q9UFC0 647 aa16.56■□□□□ 0.24
AC005840.4-201ENST00000541242 CAPN11Q9UMQ6 739 aa16.56■□□□□ 0.24
AC005840.4-201ENST00000541242 B4DLN1 442 aa16.55■□□□□ 0.24
AC005840.4-201ENST00000541242 MBD4O95243 580 aa16.55■□□□□ 0.24
AC005840.4-201ENST00000541242 SCP2P22307 547 aa16.55■□□□□ 0.24
AC005840.4-201ENST00000541242 SKOR1P84550 965 aa16.55■□□□□ 0.24
AC005840.4-201ENST00000541242 CHRNDQ07001 517 aa16.55■□□□□ 0.24
AC005840.4-201ENST00000541242 PTGDRQ13258 359 aa16.55■□□□□ 0.24
AC005840.4-201ENST00000541242 NNTQ13423 1086 aa16.55■□□□□ 0.24
AC005840.4-201ENST00000541242 SPATA4Q8NEY3 305 aa16.55■□□□□ 0.24
AC005840.4-201ENST00000541242 CENPHQ9H3R5 247 aa16.55■□□□□ 0.24
AC005840.4-201ENST00000541242 ARMT1Q9H993 441 aa16.55■□□□□ 0.24
AC005840.4-201ENST00000541242 TAF1P21675 1872 aa16.55■□□□□ 0.24
AC005840.4-201ENST00000541242 ZNF263O14978 683 aa16.55■□□□□ 0.24
AC005840.4-201ENST00000541242 HSF2BPO75031 334 aa16.55■□□□□ 0.24
AC005840.4-201ENST00000541242 FSBPO95073 299 aa16.55■□□□□ 0.24
AC005840.4-201ENST00000541242 IGHMBP2P38935 993 aaKnown RBP16.55■□□□□ 0.24
AC005840.4-201ENST00000541242 NAA35Q5VZE5 725 aa16.55■□□□□ 0.24
AC005840.4-201ENST00000541242 CCDC70Q6NSX1 233 aa16.55■□□□□ 0.24
AC005840.4-201ENST00000541242 PDXDC2PQ6P474 469 aa16.55■□□□□ 0.24
AC005840.4-201ENST00000541242 B4GALNT4Q76KP1 1039 aa16.55■□□□□ 0.24
AC005840.4-201ENST00000541242 FANCBQ8NB91 859 aa16.55■□□□□ 0.24
AC005840.4-201ENST00000541242 SNX12Q9UMY4 172 aa16.55■□□□□ 0.24
AC005840.4-201ENST00000541242 IQSEC3Q9UPP2 1182 aaPredicted RBP16.55■□□□□ 0.24
AC005840.4-201ENST00000541242 RASSF10A6NK89 507 aa16.54■□□□□ 0.24
AC005840.4-201ENST00000541242 LGALS16A8MUM7 142 aa16.54■□□□□ 0.24
AC005840.4-201ENST00000541242 ERFEQ4G0M1 354 aa16.54■□□□□ 0.24
AC005840.4-201ENST00000541242 AKNAD1Q5T1N1 836 aa16.54■□□□□ 0.24
AC005840.4-201ENST00000541242 ZNF658Q5TYW1 1059 aaPredicted RBP16.54■□□□□ 0.24
AC005840.4-201ENST00000541242 MFSD6Q6ZSS7 791 aa16.54■□□□□ 0.24
AC005840.4-201ENST00000541242 MMGT1Q8N4V1 131 aa16.54■□□□□ 0.24
AC005840.4-201ENST00000541242 EHBP1Q8NDI1 1231 aa16.54■□□□□ 0.24
AC005840.4-201ENST00000541242 ZNF507Q8TCN5 953 aa16.54■□□□□ 0.24
AC005840.4-201ENST00000541242 DOCK2Q92608 1830 aa16.54■□□□□ 0.24
AC005840.4-201ENST00000541242 SPATA31A6Q5VVP1 1343 aa16.54■□□□□ 0.24
AC005840.4-201ENST00000541242 ZSCAN5CA6NGD5 496 aaPredicted RBP16.54■□□□□ 0.24
AC005840.4-201ENST00000541242 SMIM22K7EJ46 135 aa16.54■□□□□ 0.24
AC005840.4-201ENST00000541242 NCK2O43639 380 aa16.54■□□□□ 0.24
AC005840.4-201ENST00000541242 MOCS3O95396 460 aa16.54■□□□□ 0.24
AC005840.4-201ENST00000541242 RPN1P04843 607 aaKnown RBP16.54■□□□□ 0.24
AC005840.4-201ENST00000541242 TRIM21P19474 475 aaKnown RBP16.54■□□□□ 0.24
AC005840.4-201ENST00000541242 LSP1P33241 339 aa16.54■□□□□ 0.24
AC005840.4-201ENST00000541242 CYLC1P35663 651 aaPredicted RBP16.54■□□□□ 0.24
AC005840.4-201ENST00000541242 NAP1L1P55209 391 aaKnown RBP16.54■□□□□ 0.24
AC005840.4-201ENST00000541242 ACTN3Q08043 901 aaPredicted RBP16.54■□□□□ 0.24
AC005840.4-201ENST00000541242 HAUS3Q68CZ6 603 aa16.54■□□□□ 0.24
AC005840.4-201ENST00000541242 ZNF654Q8IZM8 581 aa16.54■□□□□ 0.24
AC005840.4-201ENST00000541242 RTL9Q8NET4 1388 aa16.53■□□□□ 0.24
AC005840.4-201ENST00000541242 ESYT3A0FGR9 886 aa16.53■□□□□ 0.24
AC005840.4-201ENST00000541242 ANO9A1A5B4 782 aa16.53■□□□□ 0.24
AC005840.4-201ENST00000541242 NKRFO15226 690 aaKnown RBP eCLIP16.53■□□□□ 0.24
AC005840.4-201ENST00000541242 FAM153BP0C7A2 387 aa16.53■□□□□ 0.24
AC005840.4-201ENST00000541242 BRD2P25440 801 aaKnown RBP16.53■□□□□ 0.24
AC005840.4-201ENST00000541242 KRT2P35908 639 aa16.53■□□□□ 0.24
AC005840.4-201ENST00000541242 EPHB4P54760 987 aa16.53■□□□□ 0.24
AC005840.4-201ENST00000541242 HDLBPQ00341 1268 aaKnown RBP16.53■□□□□ 0.24
AC005840.4-201ENST00000541242 MAP3K12Q12852 859 aa16.53■□□□□ 0.24
AC005840.4-201ENST00000541242 IL17AQ16552 155 aa16.53■□□□□ 0.24
AC005840.4-201ENST00000541242 CCDC96Q2M329 555 aa16.53■□□□□ 0.24
AC005840.4-201ENST00000541242 FAM153CQ494X1 144 aa16.53■□□□□ 0.24
AC005840.4-201ENST00000541242 FAM153AQ9UHL3 310 aa16.53■□□□□ 0.24
AC005840.4-201ENST00000541242 CICQ96RK0 1608 aaPredicted RBP16.53■□□□□ 0.24
AC005840.4-201ENST00000541242 PATL2C9JE40 543 aaKnown RBP16.53■□□□□ 0.24
AC005840.4-201ENST00000541242 ALX1Q15699 326 aa16.53■□□□□ 0.24
AC005840.4-201ENST00000541242 PKN1Q16512 942 aa16.53■□□□□ 0.24
AC005840.4-201ENST00000541242 IQCEQ6IPM2 695 aa16.53■□□□□ 0.24
AC005840.4-201ENST00000541242 GIMAP7Q8NHV1 300 aa16.53■□□□□ 0.24
AC005840.4-201ENST00000541242 ZNF473Q8WTR7 871 aaKnown RBP16.53■□□□□ 0.24
AC005840.4-201ENST00000541242 FERMT2Q96AC1 680 aa16.53■□□□□ 0.24
AC005840.4-201ENST00000541242 CCDC43Q96MW1 224 aaKnown RBP16.53■□□□□ 0.24
AC005840.4-201ENST00000541242 COL5A3P25940 1745 aaPredicted RBP16.53■□□□□ 0.24
AC005840.4-201ENST00000541242 GSG1L2A8MUP6 293 aa16.52■□□□□ 0.24
AC005840.4-201ENST00000541242 ECM2O94769 699 aaPredicted RBP16.52■□□□□ 0.24
AC005840.4-201ENST00000541242 IPO7O95373 1038 aaKnown RBP16.52■□□□□ 0.24
AC005840.4-201ENST00000541242 EPB41P11171 864 aaKnown RBP16.52■□□□□ 0.24
AC005840.4-201ENST00000541242 DDR1Q08345 913 aa16.52■□□□□ 0.24
AC005840.4-201ENST00000541242 KIF5AQ12840 1032 aa16.52■□□□□ 0.24
AC005840.4-201ENST00000541242 IFT88Q13099 833 aa16.52■□□□□ 0.24
AC005840.4-201ENST00000541242 MEA1Q16626 185 aa16.52■□□□□ 0.24
AC005840.4-201ENST00000541242 LCORLQ8N3X6 602 aa16.52■□□□□ 0.24
AC005840.4-201ENST00000541242 PCMTD1Q96MG8 357 aaPredicted RBP16.52■□□□□ 0.24
AC005840.4-201ENST00000541242 PURBQ96QR8 312 aaKnown RBP16.52■□□□□ 0.24
AC005840.4-201ENST00000541242 STIM2Q9P246 746 aa16.52■□□□□ 0.24
AC005840.4-201ENST00000541242 ZNF233A6NK53 670 aa16.52■□□□□ 0.23
AC005840.4-201ENST00000541242 ADAMTS3O15072 1205 aa16.52■□□□□ 0.23
AC005840.4-201ENST00000541242 GTPBP6O43824 516 aaPredicted RBP16.52■□□□□ 0.23
AC005840.4-201ENST00000541242 TTC38Q5R3I4 469 aa16.52■□□□□ 0.23
AC005840.4-201ENST00000541242 BICDL1Q6ZP65 573 aa16.52■□□□□ 0.23
AC005840.4-201ENST00000541242 KLC4Q9NSK0 619 aa16.52■□□□□ 0.23
AC005840.4-201ENST00000541242 LAMB2P55268 1798 aa16.51■□□□□ 0.23
AC005840.4-201ENST00000541242 H7C1D1 291 aa16.51■□□□□ 0.23
AC005840.4-201ENST00000541242 SSBP05455 408 aaKnown RBP eCLIP16.51■□□□□ 0.23
AC005840.4-201ENST00000541242 SF3B2Q13435 895 aaKnown RBP16.51■□□□□ 0.23
AC005840.4-201ENST00000541242 MS4A14Q96JA4 679 aa16.51■□□□□ 0.23
AC005840.4-201ENST00000541242 OSBPL9Q96SU4 736 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms