RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 CYTH3O43739 400 aa19.69■□□□□ 0.74
CD9-209ENST00000540891 REC8O95072 547 aa19.69■□□□□ 0.74
CD9-209ENST00000540891 ZNF865P0CJ78 1059 aaPredicted RBP19.69■□□□□ 0.74
CD9-209ENST00000540891 CNGA1P29973 690 aa19.69■□□□□ 0.74
CD9-209ENST00000540891 LIFRP42702 1097 aa19.69■□□□□ 0.74
CD9-209ENST00000540891 QRICH1Q2TAL8 776 aa19.69■□□□□ 0.74
CD9-209ENST00000540891 NSMFQ6X4W1 530 aa19.69■□□□□ 0.74
CD9-209ENST00000540891 CATIPQ7Z7H3 387 aa19.69■□□□□ 0.74
CD9-209ENST00000540891 ZNF654Q8IZM8 581 aa19.69■□□□□ 0.74
CD9-209ENST00000540891 ANKLE1Q8NAG6 615 aa19.69■□□□□ 0.74
CD9-209ENST00000540891 PURBQ96QR8 312 aaKnown RBP19.69■□□□□ 0.74
CD9-209ENST00000540891 MYL10Q9BUA6 226 aa19.69■□□□□ 0.74
CD9-209ENST00000540891 NRBP1Q9UHY1 535 aa19.69■□□□□ 0.74
CD9-209ENST00000540891 PFASO15067 1338 aa19.69■□□□□ 0.74
CD9-209ENST00000540891 SYNGAP1Q96PV0 1343 aa19.69■□□□□ 0.74
CD9-209ENST00000540891 FRMPD3Q5JV73 1810 aa19.69■□□□□ 0.74
CD9-209ENST00000540891 LCTP09848 1927 aa19.68■□□□□ 0.74
CD9-209ENST00000540891 SEPT4O43236 478 aa19.68■□□□□ 0.74
CD9-209ENST00000540891 BAATQ14032 418 aaPredicted RBP19.68■□□□□ 0.74
CD9-209ENST00000540891 KRT32Q14532 448 aa19.68■□□□□ 0.74
CD9-209ENST00000540891 USH1GQ495M9 461 aa19.68■□□□□ 0.74
CD9-209ENST00000540891 TCEANC2Q96MN5 208 aa19.68■□□□□ 0.74
CD9-209ENST00000540891 MAP3K14Q99558 947 aa19.68■□□□□ 0.74
CD9-209ENST00000540891 RIOX1Q9H6W3 641 aa19.68■□□□□ 0.74
CD9-209ENST00000540891 SNX14Q9Y5W7 946 aa19.68■□□□□ 0.74
CD9-209ENST00000540891 DHX16O60231 1041 aaKnown RBP19.67■□□□□ 0.74
CD9-209ENST00000540891 MSCO60682 206 aa19.67■□□□□ 0.74
CD9-209ENST00000540891 PPP1R11O60927 126 aaPredicted RBP19.67■□□□□ 0.74
CD9-209ENST00000540891 DDAH1O94760 285 aa19.67■□□□□ 0.74
CD9-209ENST00000540891 ANO1Q5XXA6 986 aa19.67■□□□□ 0.74
CD9-209ENST00000540891 SLC30A10Q6XR72 485 aa19.67■□□□□ 0.74
CD9-209ENST00000540891 ARMCX2Q7L311 632 aa19.67■□□□□ 0.74
CD9-209ENST00000540891 DHX32Q7L7V1 743 aaKnown RBP19.67■□□□□ 0.74
CD9-209ENST00000540891 SGMS1Q86VZ5 419 aa19.67■□□□□ 0.74
CD9-209ENST00000540891 CCDC144CPQ8IYA2 1237 aa19.67■□□□□ 0.74
CD9-209ENST00000540891 TMTC2Q8N394 836 aa19.67■□□□□ 0.74
CD9-209ENST00000540891 NUP133Q8WUM0 1156 aa19.67■□□□□ 0.74
CD9-209ENST00000540891 PAWRQ96IZ0 340 aaKnown RBP19.67■□□□□ 0.74
CD9-209ENST00000540891 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.67■□□□□ 0.74
CD9-209ENST00000540891 EPB41L2O43491 1005 aaKnown RBP19.66■□□□□ 0.74
CD9-209ENST00000540891 NFXL1Q6ZNB6 911 aa19.66■□□□□ 0.74
CD9-209ENST00000540891 KATNBL1Q9H079 304 aa19.66■□□□□ 0.74
CD9-209ENST00000540891 DDX49Q9Y6V7 483 aaKnown RBP19.66■□□□□ 0.74
CD9-209ENST00000540891 CCDC69A6NI79 296 aa19.65■□□□□ 0.74
CD9-209ENST00000540891 CPA1P15085 419 aa19.65■□□□□ 0.74
CD9-209ENST00000540891 RXRAP19793 462 aa19.65■□□□□ 0.74
CD9-209ENST00000540891 RPS6P62753 249 aaKnown RBP19.65■□□□□ 0.74
CD9-209ENST00000540891 RNF207Q6ZRF8 634 aa19.65■□□□□ 0.74
CD9-209ENST00000540891 FBXO11Q86XK2 927 aa19.65■□□□□ 0.74
CD9-209ENST00000540891 RAB11FIP4Q86YS3 637 aa19.65■□□□□ 0.74
CD9-209ENST00000540891 TBC1D5Q92609 795 aa19.65■□□□□ 0.74
CD9-209ENST00000540891 PIGSQ96S52 555 aa19.65■□□□□ 0.74
CD9-209ENST00000540891 USP26Q9BXU7 913 aa19.65■□□□□ 0.74
CD9-209ENST00000540891 CNPY2Q9Y2B0 182 aa19.65■□□□□ 0.74
CD9-209ENST00000540891 ABCB11O95342 1321 aa19.65■□□□□ 0.74
CD9-209ENST00000540891 PTPDC1A2A3K4 754 aa19.64■□□□□ 0.73
CD9-209ENST00000540891 ZBTB5O15062 677 aa19.64■□□□□ 0.73
CD9-209ENST00000540891 ACVR2BQ13705 512 aa19.64■□□□□ 0.73
CD9-209ENST00000540891 RGS22Q8NE09 1264 aa19.64■□□□□ 0.73
CD9-209ENST00000540891 CTCFLQ8NI51 663 aaPredicted RBP19.64■□□□□ 0.73
CD9-209ENST00000540891 JAKMIP1Q96N16 626 aaKnown RBP19.64■□□□□ 0.73
CD9-209ENST00000540891 ZHX1Q9UKY1 873 aaPredicted RBP19.64■□□□□ 0.73
CD9-209ENST00000540891 MCM3APO60318 1980 aa19.63■□□□□ 0.73
CD9-209ENST00000540891 LRRC37A2A6NM11 1700 aa19.63■□□□□ 0.73
CD9-209ENST00000540891 OPLAHO14841 1288 aa19.63■□□□□ 0.73
CD9-209ENST00000540891 PLEKHA8P1O95397 391 aa19.63■□□□□ 0.73
CD9-209ENST00000540891 HMGB1P09429 215 aaKnown RBP19.63■□□□□ 0.73
CD9-209ENST00000540891 COL6A1P12109 1028 aa19.63■□□□□ 0.73
CD9-209ENST00000540891 AKR1A1P14550 325 aa19.63■□□□□ 0.73
CD9-209ENST00000540891 CALML3P27482 149 aa19.63■□□□□ 0.73
CD9-209ENST00000540891 NECAB2Q7Z6G3 386 aa19.63■□□□□ 0.73
CD9-209ENST00000540891 HOMER1Q86YM7 354 aa19.63■□□□□ 0.73
CD9-209ENST00000540891 MORC4Q8TE76 937 aa19.63■□□□□ 0.73
CD9-209ENST00000540891 LENG1Q96BZ8 264 aaPredicted RBP19.63■□□□□ 0.73
CD9-209ENST00000540891 AMNQ9BXJ7 453 aa19.63■□□□□ 0.73
CD9-209ENST00000540891 ABHD16BQ9H3Z7 469 aa19.63■□□□□ 0.73
CD9-209ENST00000540891 BRPF3Q9ULD4 1205 aa19.63■□□□□ 0.73
CD9-209ENST00000540891 SLC12A7Q9Y666 1083 aa19.63■□□□□ 0.73
CD9-209ENST00000540891 ASB14A6NK59 587 aa19.62■□□□□ 0.73
CD9-209ENST00000540891 ADCY6O43306 1168 aa19.62■□□□□ 0.73
CD9-209ENST00000540891 KIF5BP33176 963 aa19.62■□□□□ 0.73
CD9-209ENST00000540891 ALDH5A1P51649 535 aaPredicted RBP19.62■□□□□ 0.73
CD9-209ENST00000540891 APOA5Q6Q788 366 aa19.62■□□□□ 0.73
CD9-209ENST00000540891 SRBD1Q8N5C6 995 aaKnown RBP19.62■□□□□ 0.73
CD9-209ENST00000540891 SPZ1Q9BXG8 430 aa19.62■□□□□ 0.73
CD9-209ENST00000540891 C11orf49Q9H6J7 331 aa19.62■□□□□ 0.73
CD9-209ENST00000540891 PDE4DIPQ5VU43 2346 aa19.61■□□□□ 0.73
CD9-209ENST00000540891 CALM1P0DP23 149 aa19.61■□□□□ 0.73
CD9-209ENST00000540891 CALM2P0DP24 149 aa19.61■□□□□ 0.73
CD9-209ENST00000540891 CALM3P0DP25 149 aa19.61■□□□□ 0.73
CD9-209ENST00000540891 MICU3Q86XE3 530 aa19.61■□□□□ 0.73
CD9-209ENST00000540891 CMTR1Q8N1G2 835 aaKnown RBP19.61■□□□□ 0.73
CD9-209ENST00000540891 FANCBQ8NB91 859 aa19.61■□□□□ 0.73
CD9-209ENST00000540891 SYTL5Q8TDW5 730 aaPredicted RBP19.61■□□□□ 0.73
CD9-209ENST00000540891 COL20A1Q9P218 1284 aa19.61■□□□□ 0.73
CD9-209ENST00000540891 MRPL11Q9Y3B7 192 aaKnown RBP19.61■□□□□ 0.73
CD9-209ENST00000540891 PCDHA1Q9Y5I3 950 aa19.61■□□□□ 0.73
CD9-209ENST00000540891 MYH6P13533 1939 aa19.61■□□□□ 0.73
CD9-209ENST00000540891 PNMA6FA0A0J9YX94 578 aa19.6■□□□□ 0.73
CD9-209ENST00000540891 DNM1LO00429 736 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms