RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 BMP8AQ7Z5Y6 402 aa10.68□□□□□ -0.7
TRAPPC1-202ENST00000540486 MAPKAPK5Q8IW41 473 aa10.68□□□□□ -0.7
TRAPPC1-202ENST00000540486 CLASRPQ8N2M8 674 aaKnown RBP10.68□□□□□ -0.7
TRAPPC1-202ENST00000540486 SPATA5Q8NB90 893 aa10.68□□□□□ -0.7
TRAPPC1-202ENST00000540486 SLC43A3Q8NBI5 491 aa10.68□□□□□ -0.7
TRAPPC1-202ENST00000540486 PRSS33Q8NF86 280 aa10.68□□□□□ -0.7
TRAPPC1-202ENST00000540486 ACER1Q8TDN7 264 aa10.68□□□□□ -0.7
TRAPPC1-202ENST00000540486 MMP19Q99542 508 aa10.68□□□□□ -0.7
TRAPPC1-202ENST00000540486 NOC4LQ9BVI4 516 aaKnown RBP10.68□□□□□ -0.7
TRAPPC1-202ENST00000540486 IRF2BPLQ9H1B7 796 aa10.68□□□□□ -0.7
TRAPPC1-202ENST00000540486 CABP5Q9NP86 173 aa10.68□□□□□ -0.7
TRAPPC1-202ENST00000540486 SNRKQ9NRH2 765 aa10.68□□□□□ -0.7
TRAPPC1-202ENST00000540486 RAI14Q9P0K7 980 aa10.68□□□□□ -0.7
TRAPPC1-202ENST00000540486 PRKAG3Q9UGI9 489 aa10.68□□□□□ -0.7
TRAPPC1-202ENST00000540486 FAM50BQ9Y247 325 aa10.68□□□□□ -0.7
TRAPPC1-202ENST00000540486 GBF1Q92538 1859 aa10.68□□□□□ -0.7
TRAPPC1-202ENST00000540486 FLT1P17948 1338 aa10.67□□□□□ -0.7
TRAPPC1-202ENST00000540486 UMODL1Q5DID0 1318 aa10.67□□□□□ -0.7
TRAPPC1-202ENST00000540486 MYADML2A6NDP7 307 aa10.67□□□□□ -0.7
TRAPPC1-202ENST00000540486 IGHDP01880 384 aa10.67□□□□□ -0.7
TRAPPC1-202ENST00000540486 CYP2E1P05181 493 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC1-202ENST00000540486 ACTN1P12814 892 aa10.67□□□□□ -0.7
TRAPPC1-202ENST00000540486 KCNA5P22460 613 aa10.67□□□□□ -0.7
TRAPPC1-202ENST00000540486 GJA9P57773 515 aa10.67□□□□□ -0.7
TRAPPC1-202ENST00000540486 HDAC1Q13547 482 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC1-202ENST00000540486 AAMPQ13685 434 aa10.67□□□□□ -0.7
TRAPPC1-202ENST00000540486 GNASQ5JWF2 1037 aa10.67□□□□□ -0.7
TRAPPC1-202ENST00000540486 TTC39AQ5SRH9 613 aa10.67□□□□□ -0.7
TRAPPC1-202ENST00000540486 LRRCC1Q9C099 1032 aa10.67□□□□□ -0.7
TRAPPC1-202ENST00000540486 BCL11AQ9H165 835 aa10.67□□□□□ -0.7
TRAPPC1-202ENST00000540486 UPF3AQ9H1J1 476 aaKnown RBP10.67□□□□□ -0.7
TRAPPC1-202ENST00000540486 CABYRO75952 493 aa10.66□□□□□ -0.7
TRAPPC1-202ENST00000540486 PGK2P07205 417 aa10.66□□□□□ -0.7
TRAPPC1-202ENST00000540486 ZAP70P43403 619 aa10.66□□□□□ -0.7
TRAPPC1-202ENST00000540486 NKX3-2P78367 333 aa10.66□□□□□ -0.7
TRAPPC1-202ENST00000540486 TTLL4Q14679 1199 aa10.66□□□□□ -0.7
TRAPPC1-202ENST00000540486 ABCB5Q2M3G0 1257 aa10.66□□□□□ -0.7
TRAPPC1-202ENST00000540486 CERKLQ49MI3 558 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC1-202ENST00000540486 KCNV2Q8TDN2 545 aa10.66□□□□□ -0.7
TRAPPC1-202ENST00000540486 ANKS1AQ92625 1134 aa10.66□□□□□ -0.7
TRAPPC1-202ENST00000540486 VWCEQ96DN2 955 aa10.66□□□□□ -0.7
TRAPPC1-202ENST00000540486 TANGO6Q9C0B7 1094 aa10.66□□□□□ -0.7
TRAPPC1-202ENST00000540486 WNT8AQ9H1J5 351 aa10.66□□□□□ -0.7
TRAPPC1-202ENST00000540486 ANTXR1Q9H6X2 564 aa10.66□□□□□ -0.7
TRAPPC1-202ENST00000540486 AATFQ9NY61 560 aaKnown RBP eCLIP10.66□□□□□ -0.7
TRAPPC1-202ENST00000540486 A0A0G2JMZ2 1700 aa10.66□□□□□ -0.7
TRAPPC1-202ENST00000540486 C5orf42Q9H799 3197 aa10.65□□□□□ -0.7
TRAPPC1-202ENST00000540486 SNAI1O95863 264 aaPredicted RBP10.65□□□□□ -0.7
TRAPPC1-202ENST00000540486 IFIT2P09913 472 aaKnown RBP10.65□□□□□ -0.7
TRAPPC1-202ENST00000540486 COPB2P35606 906 aa10.65□□□□□ -0.7
TRAPPC1-202ENST00000540486 ARSIQ5FYB1 569 aa10.65□□□□□ -0.7
TRAPPC1-202ENST00000540486 MAMDC4Q6UXC1 1216 aa10.65□□□□□ -0.7
TRAPPC1-202ENST00000540486 RIOX2Q8IUF8 465 aa10.65□□□□□ -0.7
TRAPPC1-202ENST00000540486 NEK9Q8TD19 979 aa10.65□□□□□ -0.7
TRAPPC1-202ENST00000540486 AGBL1Q96MI9 1066 aa10.65□□□□□ -0.7
TRAPPC1-202ENST00000540486 EHD4Q9H223 541 aa10.65□□□□□ -0.7
TRAPPC1-202ENST00000540486 LRP2BPQ9P2M1 347 aa10.65□□□□□ -0.7
TRAPPC1-202ENST00000540486 SERPINB13Q9UIV8 391 aa10.65□□□□□ -0.7
TRAPPC1-202ENST00000540486 SIPA1L1O43166 1804 aa10.64□□□□□ -0.71
TRAPPC1-202ENST00000540486 IGSF3O75054 1194 aa10.64□□□□□ -0.71
TRAPPC1-202ENST00000540486 ARHGEF15O94989 841 aa10.64□□□□□ -0.71
TRAPPC1-202ENST00000540486 ZP2Q05996 745 aa10.64□□□□□ -0.71
TRAPPC1-202ENST00000540486 TCF15Q12870 199 aa10.64□□□□□ -0.71
TRAPPC1-202ENST00000540486 ITGA7Q13683 1181 aa10.64□□□□□ -0.71
TRAPPC1-202ENST00000540486 ACVR2BQ13705 512 aa10.64□□□□□ -0.71
TRAPPC1-202ENST00000540486 HERC4Q5GLZ8 1057 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC1-202ENST00000540486 NAA16Q6N069 864 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC1-202ENST00000540486 HERC6Q8IVU3 1022 aa10.64□□□□□ -0.71
TRAPPC1-202ENST00000540486 SCLYQ96I15 445 aa10.64□□□□□ -0.71
TRAPPC1-202ENST00000540486 PIH1D3Q9NQM4 214 aaKnown RBP10.64□□□□□ -0.71
TRAPPC1-202ENST00000540486 ZHX1Q9UKY1 873 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC1-202ENST00000540486 CACNA1BQ00975 2339 aa10.63□□□□□ -0.71
TRAPPC1-202ENST00000540486 FLOT1O75955 427 aa10.63□□□□□ -0.71
TRAPPC1-202ENST00000540486 ATP5JP18859 108 aa10.63□□□□□ -0.71
TRAPPC1-202ENST00000540486 RFC2P35250 354 aa10.63□□□□□ -0.71
TRAPPC1-202ENST00000540486 TMEM132BQ14DG7 1078 aa10.63□□□□□ -0.71
TRAPPC1-202ENST00000540486 ADHFE1Q8IWW8 467 aa10.63□□□□□ -0.71
TRAPPC1-202ENST00000540486 SMC5Q8IY18 1101 aa10.63□□□□□ -0.71
TRAPPC1-202ENST00000540486 OTUD7AQ8TE49 926 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC1-202ENST00000540486 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.63□□□□□ -0.71
TRAPPC1-202ENST00000540486 ATG4CQ96DT6 458 aa10.63□□□□□ -0.71
TRAPPC1-202ENST00000540486 BOLA2Q9H3K6 86 aa10.63□□□□□ -0.71
TRAPPC1-202ENST00000540486 ABHD16BQ9H3Z7 469 aa10.63□□□□□ -0.71
TRAPPC1-202ENST00000540486 SAP30BPQ9UHR5 308 aaKnown RBP10.63□□□□□ -0.71
TRAPPC1-202ENST00000540486 ADAMTS5Q9UNA0 930 aa10.63□□□□□ -0.71
TRAPPC1-202ENST00000540486 CACNA1HO95180 2353 aa10.62□□□□□ -0.71
TRAPPC1-202ENST00000540486 CTAGE5O15320 804 aa10.62□□□□□ -0.71
TRAPPC1-202ENST00000540486 B4GALT4O60513 344 aa10.62□□□□□ -0.71
TRAPPC1-202ENST00000540486 SUPT20HL2P0C7V6 817 aa10.62□□□□□ -0.71
TRAPPC1-202ENST00000540486 GUCY1A2P33402 732 aa10.62□□□□□ -0.71
TRAPPC1-202ENST00000540486 STAT3P40763 770 aa10.62□□□□□ -0.71
TRAPPC1-202ENST00000540486 CCDC144BQ3MJ40 725 aa10.62□□□□□ -0.71
TRAPPC1-202ENST00000540486 ANKRD45Q5TZF3 282 aa10.62□□□□□ -0.71
TRAPPC1-202ENST00000540486 TTC6Q86TZ1 520 aa10.62□□□□□ -0.71
TRAPPC1-202ENST00000540486 SUGP1Q8IWZ8 645 aaKnown RBP10.62□□□□□ -0.71
TRAPPC1-202ENST00000540486 MAGEB6Q8N7X4 407 aa10.62□□□□□ -0.71
TRAPPC1-202ENST00000540486 GDPD5Q8WTR4 605 aa10.62□□□□□ -0.71
TRAPPC1-202ENST00000540486 EDAQ92838 391 aa10.62□□□□□ -0.71
TRAPPC1-202ENST00000540486 PBXIP1Q96AQ6 731 aa10.62□□□□□ -0.71
TRAPPC1-202ENST00000540486 TRPV6Q9H1D0 765 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms