RNA–Protein interactions for RNA: ENST00000540415.1

LRP6-204, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 473 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-204ENST00000540415 SNX27Q96L92 541 aa9.62□□□□□ -0.87
LRP6-204ENST00000540415 PURBQ96QR8 312 aaKnown RBP9.62□□□□□ -0.87
LRP6-204ENST00000540415 SLC38A10Q9HBR0 1119 aa9.62□□□□□ -0.87
LRP6-204ENST00000540415 USP34Q70CQ2 3546 aa9.62□□□□□ -0.87
LRP6-204ENST00000540415 PRR33A8MZF0 331 aa9.61□□□□□ -0.87
LRP6-204ENST00000540415 ZBED4O75132 1171 aa9.61□□□□□ -0.87
LRP6-204ENST00000540415 CABYRO75952 493 aa9.61□□□□□ -0.87
LRP6-204ENST00000540415 IL9P15248 144 aa9.61□□□□□ -0.87
LRP6-204ENST00000540415 NHLH1Q02575 133 aa9.61□□□□□ -0.87
LRP6-204ENST00000540415 TTF1Q15361 905 aaPredicted RBP9.61□□□□□ -0.87
LRP6-204ENST00000540415 TAPT1Q6NXT6 567 aa9.61□□□□□ -0.87
LRP6-204ENST00000540415 TMED8Q6PL24 325 aaPredicted RBP9.61□□□□□ -0.87
LRP6-204ENST00000540415 HERC6Q8IVU3 1022 aa9.61□□□□□ -0.87
LRP6-204ENST00000540415 AP5M1Q9H0R1 490 aa9.61□□□□□ -0.87
LRP6-204ENST00000540415 A1CFQ9NQ94 594 aaKnown RBP9.61□□□□□ -0.87
LRP6-204ENST00000540415 ATP8A2Q9NTI2 1148 aa9.61□□□□□ -0.87
LRP6-204ENST00000540415 MTUS1Q9ULD2 1270 aa9.61□□□□□ -0.87
LRP6-204ENST00000540415 TNKSO95271 1327 aa9.6□□□□□ -0.87
LRP6-204ENST00000540415 IPO8O15397 1037 aaKnown RBP9.6□□□□□ -0.87
LRP6-204ENST00000540415 RLBP1P12271 317 aa9.6□□□□□ -0.87
LRP6-204ENST00000540415 RASA1P20936 1047 aa9.6□□□□□ -0.87
LRP6-204ENST00000540415 ADD2P35612 726 aa9.6□□□□□ -0.87
LRP6-204ENST00000540415 SNAP25P60880 206 aa9.6□□□□□ -0.87
LRP6-204ENST00000540415 TCTN1Q2MV58 587 aa9.6□□□□□ -0.87
LRP6-204ENST00000540415 CEP85Q6P2H3 762 aa9.6□□□□□ -0.87
LRP6-204ENST00000540415 FAM178BQ8IXR5 827 aa9.6□□□□□ -0.87
LRP6-204ENST00000540415 GJD3Q8N144 294 aa9.6□□□□□ -0.87
LRP6-204ENST00000540415 LRRC47Q8N1G4 583 aaKnown RBP9.6□□□□□ -0.87
LRP6-204ENST00000540415 CHST13Q8NET6 341 aa9.6□□□□□ -0.87
LRP6-204ENST00000540415 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.6□□□□□ -0.87
LRP6-204ENST00000540415 FBXL18Q96ME1 805 aa9.6□□□□□ -0.87
LRP6-204ENST00000540415 SLC9A7Q96T83 725 aa9.6□□□□□ -0.87
LRP6-204ENST00000540415 PHOX2BQ99453 314 aa9.6□□□□□ -0.87
LRP6-204ENST00000540415 UBE2ZQ9H832 354 aaPredicted RBP9.6□□□□□ -0.87
LRP6-204ENST00000540415 NYAP2Q9P242 653 aa9.6□□□□□ -0.87
LRP6-204ENST00000540415 CLIP2Q9UDT6 1046 aa9.6□□□□□ -0.87
LRP6-204ENST00000540415 CTDP1Q9Y5B0 961 aaPredicted RBP9.6□□□□□ -0.87
LRP6-204ENST00000540415 SLC4A4Q9Y6R1 1079 aa9.6□□□□□ -0.87
LRP6-204ENST00000540415 ZNF536O15090 1300 aa9.59□□□□□ -0.87
LRP6-204ENST00000540415 ZBED9Q6R2W3 1325 aa9.59□□□□□ -0.87
LRP6-204ENST00000540415 IGKV6D-41A0A0C4DH26 115 aa9.59□□□□□ -0.87
LRP6-204ENST00000540415 PRDM1O75626 825 aa9.59□□□□□ -0.87
LRP6-204ENST00000540415 MYL3P08590 195 aa9.59□□□□□ -0.87
LRP6-204ENST00000540415 KCNA5P22460 613 aa9.59□□□□□ -0.87
LRP6-204ENST00000540415 SSTR3P32745 418 aaPredicted RBP9.59□□□□□ -0.87
LRP6-204ENST00000540415 RASGRP2Q7LDG7 609 aa9.59□□□□□ -0.87
LRP6-204ENST00000540415 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.59□□□□□ -0.87
LRP6-204ENST00000540415 FTOQ9C0B1 505 aaKnown RBP eCLIP9.59□□□□□ -0.87
LRP6-204ENST00000540415 PUS7LQ9H0K6 701 aaKnown RBP9.59□□□□□ -0.87
LRP6-204ENST00000540415 RNF146Q9NTX7 359 aa9.59□□□□□ -0.87
LRP6-204ENST00000540415 FBXO40Q9UH90 709 aa9.59□□□□□ -0.87
LRP6-204ENST00000540415 TRIOO75962 3097 aa9.59□□□□□ -0.87
LRP6-204ENST00000540415 COL4A4P53420 1690 aaPredicted RBP9.58□□□□□ -0.88
LRP6-204ENST00000540415 MCM3APO60318 1980 aa9.58□□□□□ -0.88
LRP6-204ENST00000540415 ZEB2O60315 1214 aa9.58□□□□□ -0.88
LRP6-204ENST00000540415 PFKMP08237 780 aa9.58□□□□□ -0.88
LRP6-204ENST00000540415 IQCF3P0C7M6 154 aa9.58□□□□□ -0.88
LRP6-204ENST00000540415 ACTN1P12814 892 aa9.58□□□□□ -0.88
LRP6-204ENST00000540415 DEFB103AP81534 67 aa9.58□□□□□ -0.88
LRP6-204ENST00000540415 PURAQ00577 322 aaKnown RBP9.58□□□□□ -0.88
LRP6-204ENST00000540415 GPNMBQ14956 572 aa9.58□□□□□ -0.88
LRP6-204ENST00000540415 NBPF20Q3BBV1 942 aa9.58□□□□□ -0.88
LRP6-204ENST00000540415 MUM1L1Q5H9M0 696 aa9.58□□□□□ -0.88
LRP6-204ENST00000540415 FAM47CQ5HY64 1035 aa9.58□□□□□ -0.88
LRP6-204ENST00000540415 KIAA1211Q6ZU35 1233 aa9.58□□□□□ -0.88
LRP6-204ENST00000540415 PHOSPHO2Q8TCD6 241 aa9.58□□□□□ -0.88
LRP6-204ENST00000540415 RHPN1Q8TCX5 695 aa9.58□□□□□ -0.88
LRP6-204ENST00000540415 BOLA2Q9H3K6 86 aa9.58□□□□□ -0.88
LRP6-204ENST00000540415 ACAD9Q9H845 621 aa9.58□□□□□ -0.88
LRP6-204ENST00000540415 SUGCTQ9HAC7 445 aa9.58□□□□□ -0.88
LRP6-204ENST00000540415 PAG1Q9NWQ8 432 aa9.58□□□□□ -0.88
LRP6-204ENST00000540415 FEM1BQ9UK73 627 aa9.58□□□□□ -0.88
LRP6-204ENST00000540415 COG6Q9Y2V7 657 aa9.58□□□□□ -0.88
LRP6-204ENST00000540415 BRWD1Q9NSI6 2320 aa9.57□□□□□ -0.88
LRP6-204ENST00000540415 SCN5AQ14524 2016 aa9.57□□□□□ -0.88
LRP6-204ENST00000540415 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.57□□□□□ -0.88
LRP6-204ENST00000540415 ASB14A6NK59 587 aa9.57□□□□□ -0.88
LRP6-204ENST00000540415 TMEM232C9JQI7 657 aa9.57□□□□□ -0.88
LRP6-204ENST00000540415 ALAS1P13196 640 aa9.57□□□□□ -0.88
LRP6-204ENST00000540415 OAZ1P54368 228 aa9.57□□□□□ -0.88
LRP6-204ENST00000540415 WDR5P61964 334 aaKnown RBP9.57□□□□□ -0.88
LRP6-204ENST00000540415 LEXMQ3ZCV2 418 aa9.57□□□□□ -0.88
LRP6-204ENST00000540415 ZKSCAN2Q63HK3 967 aa9.57□□□□□ -0.88
LRP6-204ENST00000540415 IQSEC1Q6DN90 963 aa9.57□□□□□ -0.88
LRP6-204ENST00000540415 ITPRIPQ8IWB1 547 aa9.57□□□□□ -0.88
LRP6-204ENST00000540415 AMOTL1Q8IY63 956 aa9.57□□□□□ -0.88
LRP6-204ENST00000540415 CEP95Q96GE4 821 aa9.57□□□□□ -0.88
LRP6-204ENST00000540415 TRERF1Q96PN7 1200 aa9.57□□□□□ -0.88
LRP6-204ENST00000540415 ISY1Q9ULR0 285 aaKnown RBP9.57□□□□□ -0.88
LRP6-204ENST00000540415 BAZ2AQ9UIF9 1905 aaKnown RBP9.56□□□□□ -0.88
LRP6-204ENST00000540415 MINDY4BA8MYZ0 360 aa9.56□□□□□ -0.88
LRP6-204ENST00000540415 KIF28PB7ZC32 967 aa9.56□□□□□ -0.88
LRP6-204ENST00000540415 H3BQ06 376 aaPredicted RBP9.56□□□□□ -0.88
LRP6-204ENST00000540415 SUPT20HL2P0C7V6 817 aa9.56□□□□□ -0.88
LRP6-204ENST00000540415 BMP3P12645 472 aa9.56□□□□□ -0.88
LRP6-204ENST00000540415 DUSP28Q4G0W2 176 aa9.56□□□□□ -0.88
LRP6-204ENST00000540415 SLFN13Q68D06 897 aa9.56□□□□□ -0.88
LRP6-204ENST00000540415 PTCRAQ6ISU1 281 aaPredicted RBP9.56□□□□□ -0.88
LRP6-204ENST00000540415 FAM117BQ6P1L5 589 aa9.56□□□□□ -0.88
LRP6-204ENST00000540415 ERC1Q8IUD2 1116 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms