RNA–Protein interactions for RNA: ENST00000540183.1

SEMA4D-222, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-222ENST00000540183 MFSD5Q6N075 450 aa16.9■□□□□ 0.3
SEMA4D-222ENST00000540183 CXCL17Q6UXB2 119 aa16.9■□□□□ 0.3
SEMA4D-222ENST00000540183 NOL8Q76FK4 1167 aaKnown RBP16.9■□□□□ 0.3
SEMA4D-222ENST00000540183 FAM160B2Q86V87 743 aa16.9■□□□□ 0.3
SEMA4D-222ENST00000540183 USP38Q8NB14 1042 aa16.9■□□□□ 0.3
SEMA4D-222ENST00000540183 SPC25Q9HBM1 224 aa16.9■□□□□ 0.3
SEMA4D-222ENST00000540183 PRR12Q9ULL5 1215 aa16.9■□□□□ 0.3
SEMA4D-222ENST00000540183 STX8Q9UNK0 236 aa16.9■□□□□ 0.3
SEMA4D-222ENST00000540183 SALL3Q9BXA9 1300 aa16.9■□□□□ 0.3
SEMA4D-222ENST00000540183 CHD9Q3L8U1 2897 aa16.9■□□□□ 0.3
SEMA4D-222ENST00000540183 TSPY2A6NKD2 308 aa16.89■□□□□ 0.29
SEMA4D-222ENST00000540183 SLC3A2P08195 630 aaKnown RBP16.89■□□□□ 0.29
SEMA4D-222ENST00000540183 CYP2C18P33260 490 aa16.89■□□□□ 0.29
SEMA4D-222ENST00000540183 LRRFIP1Q32MZ4 808 aaKnown RBP16.89■□□□□ 0.29
SEMA4D-222ENST00000540183 EEPD1Q7L9B9 569 aa16.89■□□□□ 0.29
SEMA4D-222ENST00000540183 FBXO16Q8IX29 292 aaPredicted RBP16.89■□□□□ 0.29
SEMA4D-222ENST00000540183 CHURC1Q8WUH1 139 aa16.89■□□□□ 0.29
SEMA4D-222ENST00000540183 GNEQ9Y223 722 aaKnown RBP16.89■□□□□ 0.29
SEMA4D-222ENST00000540183 UMODL1Q5DID0 1318 aa16.89■□□□□ 0.29
SEMA4D-222ENST00000540183 MROH7Q68CQ1 1323 aa16.89■□□□□ 0.29
SEMA4D-222ENST00000540183 SMPD1P17405 629 aa16.88■□□□□ 0.29
SEMA4D-222ENST00000540183 PPIGQ13427 754 aaKnown RBP eCLIP16.88■□□□□ 0.29
SEMA4D-222ENST00000540183 TTBK2Q6IQ55 1244 aa16.88■□□□□ 0.29
SEMA4D-222ENST00000540183 RCSD1Q6JBY9 416 aa16.88■□□□□ 0.29
SEMA4D-222ENST00000540183 ZNF365Q70YC5 407 aa16.88■□□□□ 0.29
SEMA4D-222ENST00000540183 TLK2Q86UE8 772 aa16.88■□□□□ 0.29
SEMA4D-222ENST00000540183 CYP39A1Q9NYL5 469 aa16.88■□□□□ 0.29
SEMA4D-222ENST00000540183 GRIN2DO15399 1336 aa16.88■□□□□ 0.29
SEMA4D-222ENST00000540183 MYH6P13533 1939 aa16.88■□□□□ 0.29
SEMA4D-222ENST00000540183 TMEM265A0A087WTH1 108 aa16.87■□□□□ 0.29
SEMA4D-222ENST00000540183 DYNC1LI2O43237 492 aaPredicted RBP16.87■□□□□ 0.29
SEMA4D-222ENST00000540183 RANBP6O60518 1105 aaKnown RBP16.87■□□□□ 0.29
SEMA4D-222ENST00000540183 CD4P01730 458 aa16.87■□□□□ 0.29
SEMA4D-222ENST00000540183 FDX1P10109 184 aa16.87■□□□□ 0.29
SEMA4D-222ENST00000540183 SLC16A2P36021 539 aa16.87■□□□□ 0.29
SEMA4D-222ENST00000540183 PSMC6P62333 389 aa16.87■□□□□ 0.29
SEMA4D-222ENST00000540183 NKX3-2P78367 333 aa16.87■□□□□ 0.29
SEMA4D-222ENST00000540183 TKFCQ3LXA3 575 aa16.87■□□□□ 0.29
SEMA4D-222ENST00000540183 TAPT1Q6NXT6 567 aa16.87■□□□□ 0.29
SEMA4D-222ENST00000540183 NSMFQ6X4W1 530 aa16.87■□□□□ 0.29
SEMA4D-222ENST00000540183 TIFAQ96CG3 184 aa16.87■□□□□ 0.29
SEMA4D-222ENST00000540183 ZNF576Q9H609 170 aa16.87■□□□□ 0.29
SEMA4D-222ENST00000540183 PRDM6Q9NQX0 595 aa16.87■□□□□ 0.29
SEMA4D-222ENST00000540183 REV3LO60673 3130 aa16.86■□□□□ 0.29
SEMA4D-222ENST00000540183 ASB14A6NK59 587 aa16.86■□□□□ 0.29
SEMA4D-222ENST00000540183 TLR3O15455 904 aaKnown RBP16.86■□□□□ 0.29
SEMA4D-222ENST00000540183 PLA2G6O60733 806 aa16.86■□□□□ 0.29
SEMA4D-222ENST00000540183 FSCN1Q16658 493 aaKnown RBP16.86■□□□□ 0.29
SEMA4D-222ENST00000540183 CCDC96Q2M329 555 aa16.86■□□□□ 0.29
SEMA4D-222ENST00000540183 RASIP1Q5U651 963 aa16.86■□□□□ 0.29
SEMA4D-222ENST00000540183 SLC43A3Q8NBI5 491 aa16.86■□□□□ 0.29
SEMA4D-222ENST00000540183 PBX4Q9BYU1 374 aa16.86■□□□□ 0.29
SEMA4D-222ENST00000540183 TRPV6Q9H1D0 765 aa16.86■□□□□ 0.29
SEMA4D-222ENST00000540183 CXXC1Q9P0U4 656 aaPredicted RBP16.86■□□□□ 0.29
SEMA4D-222ENST00000540183 CCPG1Q9ULG6 757 aa16.86■□□□□ 0.29
SEMA4D-222ENST00000540183 FRMPD2Q68DX3 1309 aaPredicted RBP16.86■□□□□ 0.29
SEMA4D-222ENST00000540183 CHD7Q9P2D1 2997 aa16.86■□□□□ 0.29
SEMA4D-222ENST00000540183 ITGA7Q13683 1181 aa16.85■□□□□ 0.29
SEMA4D-222ENST00000540183 ANKRD45Q5TZF3 282 aa16.85■□□□□ 0.29
SEMA4D-222ENST00000540183 TMEM199Q8N511 208 aa16.85■□□□□ 0.29
SEMA4D-222ENST00000540183 FAM227BQ96M60 508 aa16.85■□□□□ 0.29
SEMA4D-222ENST00000540183 AP5M1Q9H0R1 490 aa16.85■□□□□ 0.29
SEMA4D-222ENST00000540183 ANAPC4Q9UJX5 808 aa16.85■□□□□ 0.29
SEMA4D-222ENST00000540183 TRIP12Q14669 1992 aaPredicted RBP16.85■□□□□ 0.29
SEMA4D-222ENST00000540183 TTC28Q96AY4 2481 aa16.85■□□□□ 0.29
SEMA4D-222ENST00000540183 LAMA4Q16363 1823 aa16.84■□□□□ 0.29
SEMA4D-222ENST00000540183 A0A0D9SFI3 127 aa16.84■□□□□ 0.29
SEMA4D-222ENST00000540183 NFIBO00712 420 aa16.84■□□□□ 0.29
SEMA4D-222ENST00000540183 NOVP48745 357 aa16.84■□□□□ 0.29
SEMA4D-222ENST00000540183 CCL23P55773 120 aa16.84■□□□□ 0.29
SEMA4D-222ENST00000540183 RRP12Q5JTH9 1297 aaKnown RBP16.84■□□□□ 0.29
SEMA4D-222ENST00000540183 PPM1EQ8WY54 764 aa16.84■□□□□ 0.29
SEMA4D-222ENST00000540183 RANBP17Q9H2T7 1088 aaKnown RBP16.84■□□□□ 0.29
SEMA4D-222ENST00000540183 PRDM12Q9H4Q4 367 aa16.84■□□□□ 0.29
SEMA4D-222ENST00000540183 GPCPD1Q9NPB8 672 aa16.84■□□□□ 0.29
SEMA4D-222ENST00000540183 IL23AQ9NPF7 189 aa16.84■□□□□ 0.29
SEMA4D-222ENST00000540183 SCN10AQ9Y5Y9 1956 aa16.84■□□□□ 0.29
SEMA4D-222ENST00000540183 ORC4O43929 436 aa16.83■□□□□ 0.28
SEMA4D-222ENST00000540183 B4GALT4O60513 344 aa16.83■□□□□ 0.28
SEMA4D-222ENST00000540183 ICAM1P05362 532 aa16.83■□□□□ 0.28
SEMA4D-222ENST00000540183 BAATQ14032 418 aaPredicted RBP16.83■□□□□ 0.28
SEMA4D-222ENST00000540183 KIAA1211Q6ZU35 1233 aa16.83■□□□□ 0.28
SEMA4D-222ENST00000540183 PPP1R13LQ8WUF5 828 aa16.83■□□□□ 0.28
SEMA4D-222ENST00000540183 DCAF4Q8WV16 495 aa16.83■□□□□ 0.28
SEMA4D-222ENST00000540183 CRBNQ96SW2 442 aa16.83■□□□□ 0.28
SEMA4D-222ENST00000540183 TMEM47Q9BQJ4 181 aa16.83■□□□□ 0.28
SEMA4D-222ENST00000540183 WNT8AQ9H1J5 351 aa16.83■□□□□ 0.28
SEMA4D-222ENST00000540183 HIPK3Q9H422 1215 aa16.83■□□□□ 0.28
SEMA4D-222ENST00000540183 TOMM22Q9NS69 142 aa16.83■□□□□ 0.28
SEMA4D-222ENST00000540183 PTPRSQ13332 1948 aa16.82■□□□□ 0.28
SEMA4D-222ENST00000540183 TANC1Q9C0D5 1861 aa16.82■□□□□ 0.28
SEMA4D-222ENST00000540183 ALDH5A1P51649 535 aaPredicted RBP16.82■□□□□ 0.28
SEMA4D-222ENST00000540183 HAND2P61296 217 aa16.82■□□□□ 0.28
SEMA4D-222ENST00000540183 SYDE2Q5VT97 1194 aa16.82■□□□□ 0.28
SEMA4D-222ENST00000540183 IQSEC1Q6DN90 963 aa16.82■□□□□ 0.28
SEMA4D-222ENST00000540183 PSRC1Q6PGN9 363 aaPredicted RBP16.82■□□□□ 0.28
SEMA4D-222ENST00000540183 SLC30A10Q6XR72 485 aa16.82■□□□□ 0.28
SEMA4D-222ENST00000540183 EVI5LQ96CN4 794 aa16.82■□□□□ 0.28
SEMA4D-222ENST00000540183 VWCEQ96DN2 955 aa16.82■□□□□ 0.28
SEMA4D-222ENST00000540183 NOC4LQ9BVI4 516 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms