RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 TMEM232C9JQI7 657 aa9.69□□□□□ -0.86
DDB1-217ENST00000540166 ZNF213O14771 459 aa9.69□□□□□ -0.86
DDB1-217ENST00000540166 NAP1L1P55209 391 aaKnown RBP9.69□□□□□ -0.86
DDB1-217ENST00000540166 TEX11Q8IYF3 940 aa9.69□□□□□ -0.86
DDB1-217ENST00000540166 WRNIP1Q96S55 665 aa9.69□□□□□ -0.86
DDB1-217ENST00000540166 PNKPQ96T60 521 aa9.69□□□□□ -0.86
DDB1-217ENST00000540166 ZFYVE28Q9HCC9 887 aa9.69□□□□□ -0.86
DDB1-217ENST00000540166 MANSC4A6NHS7 340 aaPredicted RBP9.68□□□□□ -0.86
DDB1-217ENST00000540166 E7EWF7 191 aa9.68□□□□□ -0.86
DDB1-217ENST00000540166 YEATS4O95619 227 aa9.68□□□□□ -0.86
DDB1-217ENST00000540166 PFKFB1P16118 471 aa9.68□□□□□ -0.86
DDB1-217ENST00000540166 ACTN3Q08043 901 aaPredicted RBP9.68□□□□□ -0.86
DDB1-217ENST00000540166 CNGA4Q8IV77 575 aa9.68□□□□□ -0.86
DDB1-217ENST00000540166 TMOD4Q9NZQ9 345 aa9.68□□□□□ -0.86
DDB1-217ENST00000540166 CASZ1Q86V15 1759 aa9.68□□□□□ -0.86
DDB1-217ENST00000540166 YDJCA8MPS7 323 aa9.68□□□□□ -0.86
DDB1-217ENST00000540166 PRC1O43663 620 aa9.68□□□□□ -0.86
DDB1-217ENST00000540166 CPP00450 1065 aa9.68□□□□□ -0.86
DDB1-217ENST00000540166 IRX1P78414 480 aaPredicted RBP9.68□□□□□ -0.86
DDB1-217ENST00000540166 RBBP5Q15291 538 aaKnown RBP9.68□□□□□ -0.86
DDB1-217ENST00000540166 RRP12Q5JTH9 1297 aaKnown RBP9.68□□□□□ -0.86
DDB1-217ENST00000540166 FMR1NBQ8N0W7 255 aaPredicted RBP9.68□□□□□ -0.86
DDB1-217ENST00000540166 CCDC82Q8N4S0 544 aa9.68□□□□□ -0.86
DDB1-217ENST00000540166 PLA2G12BQ9BX93 195 aa9.68□□□□□ -0.86
DDB1-217ENST00000540166 NAA15Q9BXJ9 866 aaKnown RBP9.68□□□□□ -0.86
DDB1-217ENST00000540166 KCNG1Q9UIX4 513 aa9.68□□□□□ -0.86
DDB1-217ENST00000540166 TLL2Q9Y6L7 1015 aa9.68□□□□□ -0.86
DDB1-217ENST00000540166 UBR3Q6ZT12 1888 aa9.68□□□□□ -0.86
DDB1-217ENST00000540166 TOGARAM1Q9Y4F4 1720 aa9.68□□□□□ -0.86
DDB1-217ENST00000540166 WNT10BO00744 389 aa9.68□□□□□ -0.86
DDB1-217ENST00000540166 ZMYND10O75800 440 aa9.68□□□□□ -0.86
DDB1-217ENST00000540166 ATP1A2P50993 1020 aa9.68□□□□□ -0.86
DDB1-217ENST00000540166 IKQ13123 557 aaPredicted RBP9.68□□□□□ -0.86
DDB1-217ENST00000540166 MIGA2Q7L4E1 593 aa9.68□□□□□ -0.86
DDB1-217ENST00000540166 UBXN6Q9BZV1 441 aa9.68□□□□□ -0.86
DDB1-217ENST00000540166 KAT14Q9H8E8 782 aa9.68□□□□□ -0.86
DDB1-217ENST00000540166 SOWAHDA6NJG2 315 aa9.67□□□□□ -0.86
DDB1-217ENST00000540166 TMCO5BA8MYB1 307 aa9.67□□□□□ -0.86
DDB1-217ENST00000540166 GOLGA8KD6RF30 607 aa9.67□□□□□ -0.86
DDB1-217ENST00000540166 GGCXP38435 758 aa9.67□□□□□ -0.86
DDB1-217ENST00000540166 IRAK1P51617 712 aa9.67□□□□□ -0.86
DDB1-217ENST00000540166 GSCP56915 257 aaPredicted RBP9.67□□□□□ -0.86
DDB1-217ENST00000540166 INHBEP58166 350 aa9.67□□□□□ -0.86
DDB1-217ENST00000540166 PABPC4Q13310 644 aaKnown RBP eCLIP9.67□□□□□ -0.861e-14■□□□□ 10.8
DDB1-217ENST00000540166 EPHA10Q5JZY3 1008 aa9.67□□□□□ -0.86
DDB1-217ENST00000540166 SPECC1Q5M775 1068 aa9.67□□□□□ -0.86
DDB1-217ENST00000540166 RIN2Q8WYP3 895 aaPredicted RBP9.67□□□□□ -0.86
DDB1-217ENST00000540166 KCNB2Q92953 911 aa9.67□□□□□ -0.86
DDB1-217ENST00000540166 TRIM17Q9Y577 477 aa9.67□□□□□ -0.86
DDB1-217ENST00000540166 CLIC4Q9Y696 253 aa9.67□□□□□ -0.86
DDB1-217ENST00000540166 N4BP3O15049 544 aa9.67□□□□□ -0.86
DDB1-217ENST00000540166 RXRAP19793 462 aa9.67□□□□□ -0.86
DDB1-217ENST00000540166 PDIA3P30101 505 aaKnown RBP9.67□□□□□ -0.86
DDB1-217ENST00000540166 CACNB3P54284 484 aa9.67□□□□□ -0.86
DDB1-217ENST00000540166 PNOCQ13519 176 aa9.67□□□□□ -0.86
DDB1-217ENST00000540166 CCDC40Q4G0X9 1142 aa9.67□□□□□ -0.86
DDB1-217ENST00000540166 ANO1Q5XXA6 986 aa9.67□□□□□ -0.86
DDB1-217ENST00000540166 MICU3Q86XE3 530 aa9.67□□□□□ -0.86
DDB1-217ENST00000540166 NCOA7Q8NI08 942 aa9.67□□□□□ -0.86
DDB1-217ENST00000540166 MYO1FO00160 1098 aa9.67□□□□□ -0.86
DDB1-217ENST00000540166 FOXN1O15353 648 aa9.67□□□□□ -0.86
DDB1-217ENST00000540166 GCFC2P16383 781 aaKnown RBP9.67□□□□□ -0.86
DDB1-217ENST00000540166 NAIF1Q69YI7 327 aaPredicted RBP9.67□□□□□ -0.86
DDB1-217ENST00000540166 BRAPQ7Z569 592 aa9.67□□□□□ -0.86
DDB1-217ENST00000540166 SAPCD2Q86UD0 394 aa9.67□□□□□ -0.86
DDB1-217ENST00000540166 EHBP1Q8NDI1 1231 aa9.67□□□□□ -0.86
DDB1-217ENST00000540166 ALG1Q9BT22 464 aa9.67□□□□□ -0.86
DDB1-217ENST00000540166 ZNF341Q9BYN7 854 aa9.67□□□□□ -0.86
DDB1-217ENST00000540166 CD248Q9HCU0 757 aa9.67□□□□□ -0.86
DDB1-217ENST00000540166 RTEL1Q9NZ71 1219 aa9.67□□□□□ -0.86
DDB1-217ENST00000540166 PAPPAQ13219 1627 aa9.66□□□□□ -0.86
DDB1-217ENST00000540166 RNF113AO15541 343 aaKnown RBP9.66□□□□□ -0.86
DDB1-217ENST00000540166 BUB1BO60566 1050 aaPredicted RBP9.66□□□□□ -0.86
DDB1-217ENST00000540166 CDKL5O76039 1030 aa9.66□□□□□ -0.86
DDB1-217ENST00000540166 SLC8A1P32418 973 aa9.66□□□□□ -0.86
DDB1-217ENST00000540166 PAFAH1B1P43034 410 aa9.66□□□□□ -0.86
DDB1-217ENST00000540166 IFT88Q13099 833 aa9.66□□□□□ -0.86
DDB1-217ENST00000540166 LONRF3Q496Y0 759 aa9.66□□□□□ -0.86
DDB1-217ENST00000540166 MAATS1Q7Z4T9 603 aa9.66□□□□□ -0.86
DDB1-217ENST00000540166 TRMT44Q8IYL2 757 aaKnown RBP9.66□□□□□ -0.86
DDB1-217ENST00000540166 ARMC2Q8NEN0 867 aa9.66□□□□□ -0.86
DDB1-217ENST00000540166 MICAL1Q8TDZ2 1067 aa9.66□□□□□ -0.86
DDB1-217ENST00000540166 CTAGE1Q96RT6 745 aa9.66□□□□□ -0.86
DDB1-217ENST00000540166 CSRNP1Q96S65 589 aa9.66□□□□□ -0.86
DDB1-217ENST00000540166 HELLSQ9NRZ9 838 aa9.66□□□□□ -0.86
DDB1-217ENST00000540166 N4BP2Q86UW6 1770 aaPredicted RBP9.66□□□□□ -0.86
DDB1-217ENST00000540166 CCL15-CCL14A0A0B4J2E2 113 aa9.66□□□□□ -0.86
DDB1-217ENST00000540166 CYP7A1P22680 504 aa9.66□□□□□ -0.86
DDB1-217ENST00000540166 CCL15Q16663 113 aa9.66□□□□□ -0.86
DDB1-217ENST00000540166 MYSM1Q5VVJ2 828 aa9.66□□□□□ -0.86
DDB1-217ENST00000540166 NCAPH2Q6IBW4 605 aa9.66□□□□□ -0.86
DDB1-217ENST00000540166 ANKZF1Q9H8Y5 726 aa9.66□□□□□ -0.86
DDB1-217ENST00000540166 VIPAS39Q9H9C1 493 aa9.66□□□□□ -0.86
DDB1-217ENST00000540166 KLC4Q9NSK0 619 aa9.66□□□□□ -0.86
DDB1-217ENST00000540166 PPP2R3BQ9Y5P8 575 aa9.66□□□□□ -0.86
DDB1-217ENST00000540166 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.66□□□□□ -0.86
DDB1-217ENST00000540166 FKTNO75072 461 aa9.66□□□□□ -0.86
DDB1-217ENST00000540166 CSF1RP07333 972 aa9.66□□□□□ -0.86
DDB1-217ENST00000540166 HSPD1P10809 573 aaKnown RBP9.66□□□□□ -0.86
DDB1-217ENST00000540166 DACT2Q5SW24 774 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms