RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 POTEB2H3BUK9 544 aa21.32■■□□□ 1
SNRPA1-203ENST00000540017 DHX16O60231 1041 aaKnown RBP21.32■■□□□ 1
SNRPA1-203ENST00000540017 SNAI1O95863 264 aaPredicted RBP21.32■■□□□ 1
SNRPA1-203ENST00000540017 CPA1P15085 419 aa21.32■■□□□ 1
SNRPA1-203ENST00000540017 LIFRP42702 1097 aa21.32■■□□□ 1
SNRPA1-203ENST00000540017 MAMDC4Q6UXC1 1216 aa21.32■■□□□ 1
SNRPA1-203ENST00000540017 ZNF467Q7Z7K2 595 aaPredicted RBP21.32■■□□□ 1
SNRPA1-203ENST00000540017 DIS3LQ8TF46 1054 aaKnown RBP21.32■■□□□ 1
SNRPA1-203ENST00000540017 NUP133Q8WUM0 1156 aa21.32■■□□□ 1
SNRPA1-203ENST00000540017 MTMR8Q96EF0 704 aa21.32■■□□□ 1
SNRPA1-203ENST00000540017 DDX20Q9UHI6 824 aaKnown RBP21.32■■□□□ 1
SNRPA1-203ENST00000540017 DDX49Q9Y6V7 483 aaKnown RBP21.32■■□□□ 1
SNRPA1-203ENST00000540017 PFASO15067 1338 aa21.31■■□□□ 1
SNRPA1-203ENST00000540017 LCTP09848 1927 aa21.31■■□□□ 1
SNRPA1-203ENST00000540017 CYTH3O43739 400 aa21.31■■□□□ 1
SNRPA1-203ENST00000540017 FARP2O94887 1054 aaPredicted RBP21.31■■□□□ 1
SNRPA1-203ENST00000540017 BAATQ14032 418 aaPredicted RBP21.31■■□□□ 1
SNRPA1-203ENST00000540017 KRT32Q14532 448 aa21.31■■□□□ 1
SNRPA1-203ENST00000540017 ANO1Q5XXA6 986 aa21.31■■□□□ 1
SNRPA1-203ENST00000540017 NFXL1Q6ZNB6 911 aa21.31■■□□□ 1
SNRPA1-203ENST00000540017 DHX32Q7L7V1 743 aaKnown RBP21.31■■□□□ 1
SNRPA1-203ENST00000540017 RAB11FIP4Q86YS3 637 aa21.31■■□□□ 1
SNRPA1-203ENST00000540017 TMTC2Q8N394 836 aa21.31■■□□□ 1
SNRPA1-203ENST00000540017 USP26Q9BXU7 913 aa21.31■■□□□ 1
SNRPA1-203ENST00000540017 RIOX1Q9H6W3 641 aa21.31■■□□□ 1
SNRPA1-203ENST00000540017 FRMPD3Q5JV73 1810 aa21.3■■□□□ 1
SNRPA1-203ENST00000540017 CCDC69A6NI79 296 aa21.3■■□□□ 1
SNRPA1-203ENST00000540017 PPP1R11O60927 126 aaPredicted RBP21.3■■□□□ 1
SNRPA1-203ENST00000540017 DDAH1O94760 285 aa21.3■■□□□ 1
SNRPA1-203ENST00000540017 ZNF865P0CJ78 1059 aaPredicted RBP21.3■■□□□ 1
SNRPA1-203ENST00000540017 RXRAP19793 462 aa21.3■■□□□ 1
SNRPA1-203ENST00000540017 SLC30A10Q6XR72 485 aa21.3■■□□□ 1
SNRPA1-203ENST00000540017 MSL3Q8N5Y2 521 aaKnown RBP21.3■■□□□ 1
SNRPA1-203ENST00000540017 PNMA2Q9UL42 364 aa21.3■■□□□ 1
SNRPA1-203ENST00000540017 SYNGAP1Q96PV0 1343 aa21.29■■□□□ 1
SNRPA1-203ENST00000540017 SEPT4O43236 478 aa21.29■■□□□ 1
SNRPA1-203ENST00000540017 ARMCX2Q7L311 632 aa21.29■■□□□ 1
SNRPA1-203ENST00000540017 SGMS1Q86VZ5 419 aa21.29■■□□□ 1
SNRPA1-203ENST00000540017 FBXO11Q86XK2 927 aa21.29■■□□□ 1
SNRPA1-203ENST00000540017 CCDC144CPQ8IYA2 1237 aa21.29■■□□□ 1
SNRPA1-203ENST00000540017 TBC1D5Q92609 795 aa21.29■■□□□ 1
SNRPA1-203ENST00000540017 PAWRQ96IZ0 340 aaKnown RBP21.29■■□□□ 1
SNRPA1-203ENST00000540017 JAKMIP1Q96N16 626 aaKnown RBP21.29■■□□□ 1
SNRPA1-203ENST00000540017 PIGSQ96S52 555 aa21.29■■□□□ 1
SNRPA1-203ENST00000540017 MAP3K14Q99558 947 aa21.29■■□□□ 1
SNRPA1-203ENST00000540017 NRBP1Q9UHY1 535 aa21.29■■□□□ 1
SNRPA1-203ENST00000540017 MCM3APO60318 1980 aa21.28■■□□□ 1
SNRPA1-203ENST00000540017 PTPDC1A2A3K4 754 aa21.28■■□□□ 1
SNRPA1-203ENST00000540017 ZBTB5O15062 677 aa21.28■■□□□ 1
SNRPA1-203ENST00000540017 CAPN2P17655 700 aa21.28■■□□□ 1
SNRPA1-203ENST00000540017 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.28■■□□□ 1
SNRPA1-203ENST00000540017 BRPF3Q9ULD4 1205 aa21.28■■□□□ 1
SNRPA1-203ENST00000540017 BAZ2BQ9UIF8 2168 aaKnown RBP21.28■■□□□ 1
SNRPA1-203ENST00000540017 MYH6P13533 1939 aa21.27■■□□□ 1
SNRPA1-203ENST00000540017 EPB41L2O43491 1005 aaKnown RBP21.27■■□□□ 1
SNRPA1-203ENST00000540017 PLEKHA8P1O95397 391 aa21.27■■□□□ 1
SNRPA1-203ENST00000540017 RPS6P62753 249 aaKnown RBP21.27■■□□□ 1
SNRPA1-203ENST00000540017 RNF207Q6ZRF8 634 aa21.27■■□□□ 1
SNRPA1-203ENST00000540017 HOMER1Q86YM7 354 aa21.27■■□□□ 1
SNRPA1-203ENST00000540017 ANKLE1Q8NAG6 615 aa21.27■■□□□ 1
SNRPA1-203ENST00000540017 KATNBL1Q9H079 304 aa21.27■■□□□ 1
SNRPA1-203ENST00000540017 CNPY2Q9Y2B0 182 aa21.27■■□□□ 1
SNRPA1-203ENST00000540017 SLC12A7Q9Y666 1083 aa21.27■■□□□ 1
SNRPA1-203ENST00000540017 ABCB11O95342 1321 aa21.27■□□□□ 0.99
SNRPA1-203ENST00000540017 OPLAHO14841 1288 aa21.26■□□□□ 0.99
SNRPA1-203ENST00000540017 MSCO60682 206 aa21.26■□□□□ 0.99
SNRPA1-203ENST00000540017 HMGB1P09429 215 aaKnown RBP21.26■□□□□ 0.99
SNRPA1-203ENST00000540017 CALML3P27482 149 aa21.26■□□□□ 0.99
SNRPA1-203ENST00000540017 APOA5Q6Q788 366 aa21.26■□□□□ 0.99
SNRPA1-203ENST00000540017 CMTR1Q8N1G2 835 aaKnown RBP21.26■□□□□ 0.99
SNRPA1-203ENST00000540017 SRBD1Q8N5C6 995 aaKnown RBP21.26■□□□□ 0.99
SNRPA1-203ENST00000540017 CTCFLQ8NI51 663 aaPredicted RBP21.26■□□□□ 0.99
SNRPA1-203ENST00000540017 PIBF1Q8WXW3 757 aa21.26■□□□□ 0.99
SNRPA1-203ENST00000540017 LENG1Q96BZ8 264 aaPredicted RBP21.26■□□□□ 0.99
SNRPA1-203ENST00000540017 AMNQ9BXJ7 453 aa21.26■□□□□ 0.99
SNRPA1-203ENST00000540017 KIF5BP33176 963 aa21.25■□□□□ 0.99
SNRPA1-203ENST00000540017 ACVR2BQ13705 512 aa21.25■□□□□ 0.99
SNRPA1-203ENST00000540017 MICU3Q86XE3 530 aa21.25■□□□□ 0.99
SNRPA1-203ENST00000540017 RGS22Q8NE09 1264 aa21.25■□□□□ 0.99
SNRPA1-203ENST00000540017 ZHX1Q9UKY1 873 aaPredicted RBP21.25■□□□□ 0.99
SNRPA1-203ENST00000540017 ASB14A6NK59 587 aa21.24■□□□□ 0.99
SNRPA1-203ENST00000540017 ADCY6O43306 1168 aa21.24■□□□□ 0.99
SNRPA1-203ENST00000540017 CALM1P0DP23 149 aa21.24■□□□□ 0.99
SNRPA1-203ENST00000540017 CALM2P0DP24 149 aa21.24■□□□□ 0.99
SNRPA1-203ENST00000540017 CALM3P0DP25 149 aa21.24■□□□□ 0.99
SNRPA1-203ENST00000540017 ALDH5A1P51649 535 aaPredicted RBP21.24■□□□□ 0.99
SNRPA1-203ENST00000540017 BLOC1S2Q6QNY1 142 aa21.24■□□□□ 0.99
SNRPA1-203ENST00000540017 FANCBQ8NB91 859 aa21.24■□□□□ 0.99
SNRPA1-203ENST00000540017 SPZ1Q9BXG8 430 aa21.24■□□□□ 0.99
SNRPA1-203ENST00000540017 ABHD16BQ9H3Z7 469 aa21.24■□□□□ 0.99
SNRPA1-203ENST00000540017 COL20A1Q9P218 1284 aa21.24■□□□□ 0.99
SNRPA1-203ENST00000540017 MRPL11Q9Y3B7 192 aaKnown RBP21.24■□□□□ 0.99
SNRPA1-203ENST00000540017 PCDHA1Q9Y5I3 950 aa21.24■□□□□ 0.99
SNRPA1-203ENST00000540017 PNMA6FA0A0J9YX94 578 aa21.23■□□□□ 0.99
SNRPA1-203ENST00000540017 CASTP20810 708 aaKnown RBP21.23■□□□□ 0.99
SNRPA1-203ENST00000540017 RPS6KB1P23443 525 aa21.23■□□□□ 0.99
SNRPA1-203ENST00000540017 GJC2Q5T442 439 aaPredicted RBP21.23■□□□□ 0.99
SNRPA1-203ENST00000540017 Q6ZUG5 572 aa21.23■□□□□ 0.99
SNRPA1-203ENST00000540017 NECAB2Q7Z6G3 386 aa21.23■□□□□ 0.99
SNRPA1-203ENST00000540017 MORC4Q8TE76 937 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms