RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 PES1O00541 588 aaKnown RBP14.8□□□□□ -0.04
UBE3B-209ENST00000539584 PRPF6O94906 941 aaKnown RBP14.8□□□□□ -0.04
UBE3B-209ENST00000539584 CLSTN1O94985 981 aa14.8□□□□□ -0.04
UBE3B-209ENST00000539584 SYF2O95926 243 aaKnown RBP14.8□□□□□ -0.04
UBE3B-209ENST00000539584 ATP6V1AP38606 617 aa14.8□□□□□ -0.04
UBE3B-209ENST00000539584 MECOMQ03112 1051 aa14.8□□□□□ -0.04
UBE3B-209ENST00000539584 CCDC155Q8N6L0 562 aa14.8□□□□□ -0.04
UBE3B-209ENST00000539584 ZNF384Q8TF68 577 aa14.8□□□□□ -0.04
UBE3B-209ENST00000539584 ANKRD2Q9GZV1 360 aa14.8□□□□□ -0.04
UBE3B-209ENST00000539584 BARHL2Q9NY43 387 aa14.8□□□□□ -0.04
UBE3B-209ENST00000539584 FAM184BQ9ULE4 1060 aa14.8□□□□□ -0.04
UBE3B-209ENST00000539584 PCDHA6Q9UN73 950 aa14.8□□□□□ -0.04
UBE3B-209ENST00000539584 MAPK8IP1Q9UQF2 711 aa14.8□□□□□ -0.04
UBE3B-209ENST00000539584 PCDHA8Q9Y5H6 950 aa14.8□□□□□ -0.04
UBE3B-209ENST00000539584 A0A1B0GUL6 1792 aa14.8□□□□□ -0.04
UBE3B-209ENST00000539584 PPFIA4O75335 1185 aa14.8□□□□□ -0.04
UBE3B-209ENST00000539584 TACC1O75410 805 aa14.8□□□□□ -0.04
UBE3B-209ENST00000539584 PMS1P54277 932 aaKnown RBP14.8□□□□□ -0.04
UBE3B-209ENST00000539584 KRT25Q7Z3Z0 450 aa14.8□□□□□ -0.04
UBE3B-209ENST00000539584 CCDC84Q86UT8 332 aaPredicted RBP14.8□□□□□ -0.04
UBE3B-209ENST00000539584 PNMA1Q8ND90 353 aa14.8□□□□□ -0.04
UBE3B-209ENST00000539584 CAGE1Q8TC20 777 aa14.8□□□□□ -0.04
UBE3B-209ENST00000539584 CCDC42Q96M95 316 aa14.8□□□□□ -0.04
UBE3B-209ENST00000539584 DUSP9Q99956 384 aaKnown RBP14.8□□□□□ -0.04
UBE3B-209ENST00000539584 EDEM3Q9BZQ6 932 aa14.8□□□□□ -0.04
UBE3B-209ENST00000539584 EFCC1Q9HA90 598 aa14.8□□□□□ -0.04
UBE3B-209ENST00000539584 PLAGL2Q9UPG8 496 aa14.8□□□□□ -0.04
UBE3B-209ENST00000539584 B4DLN1 442 aa14.79□□□□□ -0.04
UBE3B-209ENST00000539584 SMIM22K7EJ46 135 aa14.79□□□□□ -0.04
UBE3B-209ENST00000539584 ENC1O14682 589 aa14.79□□□□□ -0.04
UBE3B-209ENST00000539584 COBLO75128 1261 aa14.79□□□□□ -0.04
UBE3B-209ENST00000539584 LCA5LO95447 670 aa14.79□□□□□ -0.04
UBE3B-209ENST00000539584 IDEP14735 1019 aa14.79□□□□□ -0.04
UBE3B-209ENST00000539584 TCP1P17987 556 aaKnown RBP14.79□□□□□ -0.04
UBE3B-209ENST00000539584 SMARCA1P28370 1054 aa14.79□□□□□ -0.04
UBE3B-209ENST00000539584 SLC10A5Q5PT55 438 aa14.79□□□□□ -0.04
UBE3B-209ENST00000539584 GBP6Q6ZN66 633 aa14.79□□□□□ -0.04
UBE3B-209ENST00000539584 CERS3Q8IU89 383 aa14.79□□□□□ -0.04
UBE3B-209ENST00000539584 CNOT6LQ96LI5 555 aaKnown RBP14.79□□□□□ -0.04
UBE3B-209ENST00000539584 TRIM9Q9C026 710 aa14.79□□□□□ -0.04
UBE3B-209ENST00000539584 TRIM10Q9UDY6 481 aa14.79□□□□□ -0.04
UBE3B-209ENST00000539584 ROBO3Q96MS0 1386 aa14.79□□□□□ -0.04
UBE3B-209ENST00000539584 LOC102724428A0A0B4J2F2 783 aa14.78□□□□□ -0.04
UBE3B-209ENST00000539584 A0A0U1RQG5 324 aaPredicted RBP14.78□□□□□ -0.04
UBE3B-209ENST00000539584 MAGEA9P43362 315 aa14.78□□□□□ -0.04
UBE3B-209ENST00000539584 TNNT3P45378 269 aaPredicted RBP14.78□□□□□ -0.04
UBE3B-209ENST00000539584 SIK1P57059 783 aa14.78□□□□□ -0.04
UBE3B-209ENST00000539584 FAM47AQ5JRC9 791 aa14.78□□□□□ -0.04
UBE3B-209ENST00000539584 CABP7Q86V35 215 aa14.78□□□□□ -0.04
UBE3B-209ENST00000539584 SMARCC1Q92922 1105 aaPredicted RBP14.78□□□□□ -0.04
UBE3B-209ENST00000539584 NOC4LQ9BVI4 516 aaKnown RBP14.78□□□□□ -0.04
UBE3B-209ENST00000539584 ZNF287Q9HBT7 754 aa14.78□□□□□ -0.04
UBE3B-209ENST00000539584 RNF14Q9UBS8 474 aa14.78□□□□□ -0.04
UBE3B-209ENST00000539584 SNX12Q9UMY4 172 aa14.78□□□□□ -0.04
UBE3B-209ENST00000539584 FAM205AQ6ZU69 1335 aa14.78□□□□□ -0.04
UBE3B-209ENST00000539584 BAZ2AQ9UIF9 1905 aaKnown RBP14.78□□□□□ -0.04
UBE3B-209ENST00000539584 SHOX2O60902 331 aaPredicted RBP14.78□□□□□ -0.04
UBE3B-209ENST00000539584 TFRCP02786 760 aaKnown RBP14.78□□□□□ -0.04
UBE3B-209ENST00000539584 OR52Z1P0C646 297 aa14.78□□□□□ -0.04
UBE3B-209ENST00000539584 GNA11P29992 359 aa14.78□□□□□ -0.04
UBE3B-209ENST00000539584 HIBADHP31937 336 aaKnown RBP14.78□□□□□ -0.04
UBE3B-209ENST00000539584 MTIF2P46199 727 aaKnown RBP14.78□□□□□ -0.04
UBE3B-209ENST00000539584 PDE4DQ08499 809 aa14.78□□□□□ -0.04
UBE3B-209ENST00000539584 LRRC31Q6UY01 552 aa14.78□□□□□ -0.04
UBE3B-209ENST00000539584 ALS2CR12Q96Q35 445 aa14.78□□□□□ -0.04
UBE3B-209ENST00000539584 ZMYND12Q9H0C1 365 aa14.78□□□□□ -0.04
UBE3B-209ENST00000539584 JADE2Q9NQC1 790 aa14.78□□□□□ -0.04
UBE3B-209ENST00000539584 AGPAT5Q9NUQ2 364 aa14.78□□□□□ -0.04
UBE3B-209ENST00000539584 HDAC6Q9UBN7 1215 aa14.78□□□□□ -0.04
UBE3B-209ENST00000539584 TSKSQ9UJT2 592 aa14.78□□□□□ -0.04
UBE3B-209ENST00000539584 NMT2O60551 498 aa14.77□□□□□ -0.04
UBE3B-209ENST00000539584 TFAP4Q01664 338 aa14.77□□□□□ -0.04
UBE3B-209ENST00000539584 GLE1Q53GS7 698 aaKnown RBP14.77□□□□□ -0.04
UBE3B-209ENST00000539584 C12orf60Q5U649 245 aa14.77□□□□□ -0.04
UBE3B-209ENST00000539584 MAST2Q6P0Q8 1798 aa14.77□□□□□ -0.04
UBE3B-209ENST00000539584 SELENOOQ9BVL4 669 aa14.77□□□□□ -0.04
UBE3B-209ENST00000539584 LRRC27Q9C0I9 530 aa14.77□□□□□ -0.04
UBE3B-209ENST00000539584 MAD2L2Q9UI95 211 aa14.77□□□□□ -0.04
UBE3B-209ENST00000539584 ZC3H4Q9UPT8 1303 aaKnown RBP14.77□□□□□ -0.04
UBE3B-209ENST00000539584 THRAP3Q9Y2W1 955 aaKnown RBP14.77□□□□□ -0.04
UBE3B-209ENST00000539584 FLT1P17948 1338 aa14.77□□□□□ -0.05
UBE3B-209ENST00000539584 PVALEFA0A1B0GWK0 134 aa14.76□□□□□ -0.05
UBE3B-209ENST00000539584 TNFRSF8P28908 595 aa14.76□□□□□ -0.05
UBE3B-209ENST00000539584 MIIPQ5JXC2 388 aa14.76□□□□□ -0.05
UBE3B-209ENST00000539584 ANKRD40Q6AI12 368 aa14.76□□□□□ -0.05
UBE3B-209ENST00000539584 CENPPQ6IPU0 288 aa14.76□□□□□ -0.05
UBE3B-209ENST00000539584 FAM76AQ8TAV0 307 aa14.76□□□□□ -0.05
UBE3B-209ENST00000539584 AENQ8WTP8 325 aaKnown RBP14.76□□□□□ -0.05
UBE3B-209ENST00000539584 PCMTD1Q96MG8 357 aaPredicted RBP14.76□□□□□ -0.05
UBE3B-209ENST00000539584 SPZ1Q9BXG8 430 aa14.76□□□□□ -0.05
UBE3B-209ENST00000539584 LACRTQ9GZZ8 138 aa14.76□□□□□ -0.05
UBE3B-209ENST00000539584 NUCKS1Q9H1E3 243 aaKnown RBP14.76□□□□□ -0.05
UBE3B-209ENST00000539584 TMEM60Q9H2L4 133 aa14.76□□□□□ -0.05
UBE3B-209ENST00000539584 KIAA1551Q9HCM1 1747 aa14.76□□□□□ -0.05
UBE3B-209ENST00000539584 PALM3A6NDB9 673 aaPredicted RBP14.76□□□□□ -0.05
UBE3B-209ENST00000539584 RASSF10A6NK89 507 aa14.76□□□□□ -0.05
UBE3B-209ENST00000539584 GOLGA8KD6RF30 607 aa14.76□□□□□ -0.05
UBE3B-209ENST00000539584 STXBP3O00186 592 aa14.76□□□□□ -0.05
UBE3B-209ENST00000539584 OPA1O60313 960 aa14.76□□□□□ -0.05
UBE3B-209ENST00000539584 VEGFAP15692 232 aaPredicted RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms