RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 NGLY1Q96IV0 654 aa14.1□□□□□ -0.15
SFSWAP-208ENST00000539506 RTFDC1Q9BY42 306 aaPredicted RBP14.1□□□□□ -0.15
SFSWAP-208ENST00000539506 DUSP10Q9Y6W6 482 aa14.1□□□□□ -0.15
SFSWAP-208ENST00000539506 ATP8B1O43520 1251 aa14.09□□□□□ -0.15
SFSWAP-208ENST00000539506 TSPY3P0CV98 308 aa14.09□□□□□ -0.15
SFSWAP-208ENST00000539506 TSPY8P0CW00 308 aa14.09□□□□□ -0.15
SFSWAP-208ENST00000539506 LONP1P36776 959 aaKnown RBP14.09□□□□□ -0.15
SFSWAP-208ENST00000539506 GRAPQ13588 217 aa14.09□□□□□ -0.15
SFSWAP-208ENST00000539506 ZNF658Q5TYW1 1059 aaPredicted RBP14.09□□□□□ -0.15
SFSWAP-208ENST00000539506 SPTY2D1Q68D10 685 aaPredicted RBP14.09□□□□□ -0.15
SFSWAP-208ENST00000539506 HEATR3Q7Z4Q2 680 aa14.09□□□□□ -0.15
SFSWAP-208ENST00000539506 GRAPLQ8TC17 118 aaPredicted RBP14.09□□□□□ -0.15
SFSWAP-208ENST00000539506 SH3GLB2Q9NR46 395 aa14.09□□□□□ -0.15
SFSWAP-208ENST00000539506 DISC1Q9NRI5 854 aa14.09□□□□□ -0.15
SFSWAP-208ENST00000539506 STX8Q9UNK0 236 aa14.09□□□□□ -0.15
SFSWAP-208ENST00000539506 PALM3A6NDB9 673 aaPredicted RBP14.09□□□□□ -0.15
SFSWAP-208ENST00000539506 CALML3P27482 149 aa14.09□□□□□ -0.15
SFSWAP-208ENST00000539506 TCP11X2Q5H9J9 407 aa14.09□□□□□ -0.15
SFSWAP-208ENST00000539506 CEP112Q8N8E3 955 aa14.09□□□□□ -0.15
SFSWAP-208ENST00000539506 MMS19Q96T76 1030 aa14.09□□□□□ -0.15
SFSWAP-208ENST00000539506 NAPGQ99747 312 aaPredicted RBP14.09□□□□□ -0.15
SFSWAP-208ENST00000539506 EIF3CLB5ME19 914 aaKnown RBP14.08□□□□□ -0.15
SFSWAP-208ENST00000539506 KLRC4O43908 158 aa14.08□□□□□ -0.15
SFSWAP-208ENST00000539506 RNF40O75150 1001 aa14.08□□□□□ -0.15
SFSWAP-208ENST00000539506 DNA2P51530 1060 aa14.08□□□□□ -0.15
SFSWAP-208ENST00000539506 GPSM2P81274 684 aa14.08□□□□□ -0.15
SFSWAP-208ENST00000539506 PAK1Q13153 545 aa14.08□□□□□ -0.15
SFSWAP-208ENST00000539506 WDR66Q8TBY9 1149 aa14.08□□□□□ -0.15
SFSWAP-208ENST00000539506 EIF3CQ99613 913 aaKnown RBP14.08□□□□□ -0.15
SFSWAP-208ENST00000539506 BARHL2Q9NY43 387 aa14.08□□□□□ -0.15
SFSWAP-208ENST00000539506 SMARCAL1Q9NZC9 954 aa14.08□□□□□ -0.15
SFSWAP-208ENST00000539506 ERLIN1O75477 346 aa14.08□□□□□ -0.16
SFSWAP-208ENST00000539506 COPB1P53618 953 aaKnown RBP14.08□□□□□ -0.16
SFSWAP-208ENST00000539506 PPP4CP60510 307 aa14.08□□□□□ -0.16
SFSWAP-208ENST00000539506 CTAGE1Q96RT6 745 aa14.08□□□□□ -0.16
SFSWAP-208ENST00000539506 MYO6Q9UM54 1294 aa14.08□□□□□ -0.16
SFSWAP-208ENST00000539506 KCNJ18B7U540 433 aa14.08□□□□□ -0.16
SFSWAP-208ENST00000539506 ATP1A1P05023 1023 aaKnown RBP14.08□□□□□ -0.16
SFSWAP-208ENST00000539506 MYBL2P10244 700 aa14.08□□□□□ -0.16
SFSWAP-208ENST00000539506 FECHP22830 423 aa14.08□□□□□ -0.16
SFSWAP-208ENST00000539506 STAT6P42226 847 aa14.08□□□□□ -0.16
SFSWAP-208ENST00000539506 UBXN1Q04323 297 aa14.08□□□□□ -0.16
SFSWAP-208ENST00000539506 KCNJ12Q14500 433 aa14.08□□□□□ -0.16
SFSWAP-208ENST00000539506 FILIP1LQ4L180 1135 aa14.08□□□□□ -0.16
SFSWAP-208ENST00000539506 TCP11L1Q9NUJ3 509 aa14.08□□□□□ -0.16
SFSWAP-208ENST00000539506 SNED1Q8TER0 1413 aa14.07□□□□□ -0.16
SFSWAP-208ENST00000539506 MACROD2A1Z1Q3 448 aa14.07□□□□□ -0.16
SFSWAP-208ENST00000539506 KLK7P49862 253 aa14.07□□□□□ -0.16
SFSWAP-208ENST00000539506 CYP27A1Q02318 531 aa14.07□□□□□ -0.16
SFSWAP-208ENST00000539506 SMCR8Q8TEV9 937 aaPredicted RBP14.07□□□□□ -0.16
SFSWAP-208ENST00000539506 LEMD3Q9Y2U8 911 aa14.07□□□□□ -0.16
SFSWAP-208ENST00000539506 CCDC194A0A1B0GVG4 234 aa14.07□□□□□ -0.16
SFSWAP-208ENST00000539506 NKRFO15226 690 aaKnown RBP eCLIP14.07□□□□□ -0.16
SFSWAP-208ENST00000539506 EIF3JO75822 258 aaKnown RBP14.07□□□□□ -0.16
SFSWAP-208ENST00000539506 IBSPP21815 317 aaPredicted RBP14.07□□□□□ -0.16
SFSWAP-208ENST00000539506 ARHGAP25P42331 645 aa14.07□□□□□ -0.16
SFSWAP-208ENST00000539506 USP17L2Q6R6M4 530 aa14.07□□□□□ -0.16
SFSWAP-208ENST00000539506 DTHD1Q6ZMT9 781 aa14.07□□□□□ -0.16
SFSWAP-208ENST00000539506 ADSSL1Q8N142 457 aa14.07□□□□□ -0.16
SFSWAP-208ENST00000539506 LRRC4BQ9NT99 713 aa14.07□□□□□ -0.16
SFSWAP-208ENST00000539506 ABHD10Q9NUJ1 306 aa14.07□□□□□ -0.16
SFSWAP-208ENST00000539506 ITIH6Q6UXX5 1313 aa14.07□□□□□ -0.16
SFSWAP-208ENST00000539506 KLRF2D3W0D1 207 aa14.06□□□□□ -0.16
SFSWAP-208ENST00000539506 RFC4P35249 363 aa14.06□□□□□ -0.16
SFSWAP-208ENST00000539506 BTDP43251 543 aa14.06□□□□□ -0.16
SFSWAP-208ENST00000539506 FAM196AQ6ZSG2 479 aa14.06□□□□□ -0.16
SFSWAP-208ENST00000539506 ZNF444Q8N0Y2 327 aaPredicted RBP14.06□□□□□ -0.16
SFSWAP-208ENST00000539506 CDK8P49336 464 aa14.06□□□□□ -0.16
SFSWAP-208ENST00000539506 EZH2Q15910 746 aaKnown RBP14.06□□□□□ -0.16
SFSWAP-208ENST00000539506 DAGLBQ8NCG7 672 aa14.06□□□□□ -0.16
SFSWAP-208ENST00000539506 CAGE1Q8TC20 777 aa14.06□□□□□ -0.16
SFSWAP-208ENST00000539506 FLT1P17948 1338 aa14.06□□□□□ -0.16
SFSWAP-208ENST00000539506 DDX60LQ5H9U9 1706 aaKnown RBP14.06□□□□□ -0.16
SFSWAP-208ENST00000539506 PRR5LQ6MZQ0 368 aa14.06□□□□□ -0.16
SFSWAP-208ENST00000539506 NAA15Q9BXJ9 866 aaKnown RBP14.06□□□□□ -0.16
SFSWAP-208ENST00000539506 CD209Q9NNX6 404 aa14.06□□□□□ -0.16
SFSWAP-208ENST00000539506 KBTBD4Q9NVX7 518 aa14.06□□□□□ -0.16
SFSWAP-208ENST00000539506 EHD2Q9NZN4 543 aa14.06□□□□□ -0.16
SFSWAP-208ENST00000539506 CXCR5P32302 372 aa14.05□□□□□ -0.16
SFSWAP-208ENST00000539506 GGCXP38435 758 aa14.05□□□□□ -0.16
SFSWAP-208ENST00000539506 SLC7A5Q01650 507 aa14.05□□□□□ -0.16
SFSWAP-208ENST00000539506 C2orf54Q08AI8 447 aa14.05□□□□□ -0.16
SFSWAP-208ENST00000539506 MICALL1Q8N3F8 863 aa14.05□□□□□ -0.16
SFSWAP-208ENST00000539506 RASSF8Q8NHQ8 419 aa14.05□□□□□ -0.16
SFSWAP-208ENST00000539506 REXO2Q9Y3B8 237 aaKnown RBP14.05□□□□□ -0.16
SFSWAP-208ENST00000539506 BAG3O95817 575 aa14.05□□□□□ -0.16
SFSWAP-208ENST00000539506 PARP1P09874 1014 aaKnown RBP14.05□□□□□ -0.16
SFSWAP-208ENST00000539506 NOP2P46087 812 aaKnown RBP14.05□□□□□ -0.16
SFSWAP-208ENST00000539506 LIG3P49916 1009 aa14.05□□□□□ -0.16
SFSWAP-208ENST00000539506 GTF2A1P52655 376 aaPredicted RBP14.05□□□□□ -0.16
SFSWAP-208ENST00000539506 RHBDL3P58872 404 aa14.05□□□□□ -0.16
SFSWAP-208ENST00000539506 CCDC122Q5T0U0 273 aa14.05□□□□□ -0.16
SFSWAP-208ENST00000539506 TRAPPC3LQ5T215 181 aa14.05□□□□□ -0.16
SFSWAP-208ENST00000539506 CNGA4Q8IV77 575 aa14.05□□□□□ -0.16
SFSWAP-208ENST00000539506 GOLGA6L1Q8N7Z2 621 aa14.05□□□□□ -0.16
SFSWAP-208ENST00000539506 CNBD1Q8NA66 436 aa14.05□□□□□ -0.16
SFSWAP-208ENST00000539506 PCMTD1Q96MG8 357 aaPredicted RBP14.05□□□□□ -0.16
SFSWAP-208ENST00000539506 ZMYND12Q9H0C1 365 aa14.05□□□□□ -0.16
SFSWAP-208ENST00000539506 SAMM50Q9Y512 469 aa14.05□□□□□ -0.16
SFSWAP-208ENST00000539506 MYH8P13535 1937 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms