RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 ZHX2Q9Y6X8 837 aa10.09□□□□□ -0.79
DDB1-213ENST00000539332 FRMPD2Q68DX3 1309 aaPredicted RBP10.09□□□□□ -0.79
DDB1-213ENST00000539332 FAM205CA6NFA0 338 aa10.09□□□□□ -0.79
DDB1-213ENST00000539332 ADAMTS3O15072 1205 aa10.09□□□□□ -0.79
DDB1-213ENST00000539332 CUTAO60888 179 aa10.09□□□□□ -0.79
DDB1-213ENST00000539332 BMP15O95972 392 aa10.09□□□□□ -0.79
DDB1-213ENST00000539332 NLRP5P59047 1200 aa10.09□□□□□ -0.79
DDB1-213ENST00000539332 MKRN3Q13064 507 aaKnown RBP10.09□□□□□ -0.79
DDB1-213ENST00000539332 CCDC96Q2M329 555 aa10.09□□□□□ -0.79
DDB1-213ENST00000539332 KIAA1755Q5JYT7 1200 aa10.09□□□□□ -0.79
DDB1-213ENST00000539332 PPP1R18Q6NYC8 613 aa10.09□□□□□ -0.79
DDB1-213ENST00000539332 MOB2Q70IA6 237 aa10.09□□□□□ -0.79
DDB1-213ENST00000539332 KCTD1Q719H9 257 aa10.09□□□□□ -0.79
DDB1-213ENST00000539332 SPICE1Q8N0Z3 855 aa10.09□□□□□ -0.79
DDB1-213ENST00000539332 FSIP1Q8NA03 581 aa10.09□□□□□ -0.79
DDB1-213ENST00000539332 CCDC12Q8WUD4 166 aaPredicted RBP10.09□□□□□ -0.79
DDB1-213ENST00000539332 NUP88Q99567 741 aaPredicted RBP10.09□□□□□ -0.79
DDB1-213ENST00000539332 FEZ1Q99689 392 aa10.09□□□□□ -0.79
DDB1-213ENST00000539332 WDR18Q9BV38 432 aa10.09□□□□□ -0.79
DDB1-213ENST00000539332 KIAA1683Q9H0B3 1180 aa10.09□□□□□ -0.79
DDB1-213ENST00000539332 CPVLQ9H3G5 476 aa10.09□□□□□ -0.79
DDB1-213ENST00000539332 VCPKMTQ9H867 229 aa10.09□□□□□ -0.79
DDB1-213ENST00000539332 GPCPD1Q9NPB8 672 aa10.09□□□□□ -0.79
DDB1-213ENST00000539332 CEP131Q9UPN4 1083 aa10.09□□□□□ -0.79
DDB1-213ENST00000539332 HPSEQ9Y251 543 aa10.09□□□□□ -0.79
DDB1-213ENST00000539332 PCDHB6Q9Y5E3 794 aa10.09□□□□□ -0.79
DDB1-213ENST00000539332 CSADQ9Y600 493 aa10.09□□□□□ -0.79
DDB1-213ENST00000539332 SNCAIPQ9Y6H5 919 aa10.09□□□□□ -0.79
DDB1-213ENST00000539332 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.09□□□□□ -0.79
DDB1-213ENST00000539332 TRIM75PA6NK02 468 aa10.08□□□□□ -0.8
DDB1-213ENST00000539332 SPDYE4A6NLX3 237 aa10.08□□□□□ -0.8
DDB1-213ENST00000539332 USP17L10C9JJH3 530 aa10.08□□□□□ -0.8
DDB1-213ENST00000539332 PTPREP23469 700 aa10.08□□□□□ -0.8
DDB1-213ENST00000539332 SPP2Q13103 211 aa10.08□□□□□ -0.8
DDB1-213ENST00000539332 MTMR2Q13614 643 aa10.08□□□□□ -0.8
DDB1-213ENST00000539332 ZYXQ15942 572 aaKnown RBP10.08□□□□□ -0.8
DDB1-213ENST00000539332 RESP18Q5W5W9 173 aa10.08□□□□□ -0.8
DDB1-213ENST00000539332 TTBK2Q6IQ55 1244 aa10.08□□□□□ -0.8
DDB1-213ENST00000539332 CHADLQ6NUI6 762 aa10.08□□□□□ -0.8
DDB1-213ENST00000539332 BTNL9Q6UXG8 535 aa10.08□□□□□ -0.8
DDB1-213ENST00000539332 CCDC73Q6ZRK6 1079 aa10.08□□□□□ -0.8
DDB1-213ENST00000539332 ARMC9Q7Z3E5 817 aa10.08□□□□□ -0.8
DDB1-213ENST00000539332 ANKRD13AQ8IZ07 590 aa10.08□□□□□ -0.8
DDB1-213ENST00000539332 ZNF579Q8NAF0 562 aaKnown RBP10.08□□□□□ -0.8
DDB1-213ENST00000539332 ZNF280CQ8ND82 737 aa10.08□□□□□ -0.8
DDB1-213ENST00000539332 SPOCK2Q92563 424 aa10.08□□□□□ -0.8
DDB1-213ENST00000539332 CLMNQ96JQ2 1002 aa10.08□□□□□ -0.8
DDB1-213ENST00000539332 PIGSQ96S52 555 aa10.08□□□□□ -0.8
DDB1-213ENST00000539332 ZNF408Q9H9D4 720 aa10.08□□□□□ -0.8
DDB1-213ENST00000539332 JMJD4Q9H9V9 463 aa10.08□□□□□ -0.8
DDB1-213ENST00000539332 AS3MTQ9HBK9 375 aa10.08□□□□□ -0.8
DDB1-213ENST00000539332 GPBP1L1Q9HC44 474 aaPredicted RBP10.08□□□□□ -0.8
DDB1-213ENST00000539332 FBXO2Q9UK22 296 aaPredicted RBP10.08□□□□□ -0.8
DDB1-213ENST00000539332 RLFQ13129 1914 aa10.07□□□□□ -0.8
DDB1-213ENST00000539332 PNMA6FA0A0J9YX94 578 aa10.07□□□□□ -0.8
DDB1-213ENST00000539332 WNT7AO00755 349 aa10.07□□□□□ -0.8
DDB1-213ENST00000539332 ITGBL1O95965 494 aaPredicted RBP10.07□□□□□ -0.8
DDB1-213ENST00000539332 BMP3P12645 472 aa10.07□□□□□ -0.8
DDB1-213ENST00000539332 SLC16A2P36021 539 aa10.07□□□□□ -0.8
DDB1-213ENST00000539332 BACE1P56817 501 aa10.07□□□□□ -0.8
DDB1-213ENST00000539332 NOLC1Q14978 699 aaKnown RBP eCLIP10.07□□□□□ -0.8
DDB1-213ENST00000539332 NOM1Q5C9Z4 860 aaKnown RBP10.07□□□□□ -0.8
DDB1-213ENST00000539332 HEATR3Q7Z4Q2 680 aa10.07□□□□□ -0.8
DDB1-213ENST00000539332 ADGRF4Q8IZF3 695 aa10.07□□□□□ -0.8
DDB1-213ENST00000539332 KRI1Q8N9T8 703 aaKnown RBP10.07□□□□□ -0.8
DDB1-213ENST00000539332 LPAR1Q92633 364 aa10.07□□□□□ -0.8
DDB1-213ENST00000539332 UBA5Q9GZZ9 404 aa10.07□□□□□ -0.8
DDB1-213ENST00000539332 SEC63Q9UGP8 760 aaKnown RBP10.07□□□□□ -0.8
DDB1-213ENST00000539332 CTAGE5O15320 804 aa10.06□□□□□ -0.8
DDB1-213ENST00000539332 ZSCAN20P17040 1043 aaPredicted RBP10.06□□□□□ -0.8
DDB1-213ENST00000539332 MARCKSP29966 332 aaPredicted RBP10.06□□□□□ -0.8
DDB1-213ENST00000539332 FAM83BQ5T0W9 1011 aa10.06□□□□□ -0.8
DDB1-213ENST00000539332 LDLRAD1Q5T700 205 aa10.06□□□□□ -0.8
DDB1-213ENST00000539332 SHC4Q6S5L8 630 aa10.06□□□□□ -0.8
DDB1-213ENST00000539332 TNMDQ9H2S6 317 aa10.06□□□□□ -0.8
DDB1-213ENST00000539332 PCDHA6Q9UN73 950 aa10.06□□□□□ -0.8
DDB1-213ENST00000539332 AFG3L2Q9Y4W6 797 aa10.06□□□□□ -0.8
DDB1-213ENST00000539332 PCDHA8Q9Y5H6 950 aa10.06□□□□□ -0.8
DDB1-213ENST00000539332 SRPRBQ9Y5M8 271 aaKnown RBP10.06□□□□□ -0.8
DDB1-213ENST00000539332 GOLGA6L6A8MZA4 724 aa10.06□□□□□ -0.8
DDB1-213ENST00000539332 TMEM232C9JQI7 657 aa10.06□□□□□ -0.8
DDB1-213ENST00000539332 ZBTB5O15062 677 aa10.06□□□□□ -0.8
DDB1-213ENST00000539332 PPP1R11O60927 126 aaPredicted RBP10.06□□□□□ -0.8
DDB1-213ENST00000539332 PFKFB1P16118 471 aa10.06□□□□□ -0.8
DDB1-213ENST00000539332 GNA11P29992 359 aa10.06□□□□□ -0.8
DDB1-213ENST00000539332 NDUFA8P51970 172 aa10.06□□□□□ -0.8
DDB1-213ENST00000539332 USP14P54578 494 aa10.06□□□□□ -0.8
DDB1-213ENST00000539332 NAPAP54920 295 aa10.06□□□□□ -0.8
DDB1-213ENST00000539332 FKBP1BP68106 108 aa10.06□□□□□ -0.8
DDB1-213ENST00000539332 ATP2C1P98194 919 aaPredicted RBP10.06□□□□□ -0.8
DDB1-213ENST00000539332 DGKZQ13574 1117 aa10.06□□□□□ -0.8
DDB1-213ENST00000539332 SYCP1Q15431 976 aa10.06□□□□□ -0.8
DDB1-213ENST00000539332 TTC38Q5R3I4 469 aa10.06□□□□□ -0.8
DDB1-213ENST00000539332 ERO1BQ86YB8 467 aa10.06□□□□□ -0.8
DDB1-213ENST00000539332 TIGD1Q96MW7 591 aa10.06□□□□□ -0.8
DDB1-213ENST00000539332 ELP3Q9H9T3 547 aa10.06□□□□□ -0.8
DDB1-213ENST00000539332 GBA2Q9HCG7 927 aaPredicted RBP10.06□□□□□ -0.8
DDB1-213ENST00000539332 VAT1LQ9HCJ6 419 aa10.06□□□□□ -0.8
DDB1-213ENST00000539332 C6orf50Q9HD87 102 aa10.06□□□□□ -0.8
DDB1-213ENST00000539332 EMILIN3Q9NT22 766 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms