RNA–Protein interactions for RNA: ENST00000539177.1

CCDC144NL-202, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 443 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-202ENST00000539177 ACAD9Q9H845 621 aa17.48■□□□□ 0.39
CCDC144NL-202ENST00000539177 GNEQ9Y223 722 aaKnown RBP17.48■□□□□ 0.39
CCDC144NL-202ENST00000539177 IGKV6D-41A0A0C4DH26 115 aa17.47■□□□□ 0.39
CCDC144NL-202ENST00000539177 SOWAHBA6NEL2 793 aa17.47■□□□□ 0.39
CCDC144NL-202ENST00000539177 CABYRO75952 493 aa17.47■□□□□ 0.39
CCDC144NL-202ENST00000539177 ATP2A2P16615 1042 aaKnown RBP17.47■□□□□ 0.39
CCDC144NL-202ENST00000539177 SMPD1P17405 629 aa17.47■□□□□ 0.39
CCDC144NL-202ENST00000539177 SBK1Q52WX2 424 aa17.47■□□□□ 0.39
CCDC144NL-202ENST00000539177 TMEM63BQ5T3F8 832 aa17.47■□□□□ 0.39
CCDC144NL-202ENST00000539177 FBXO16Q8IX29 292 aaPredicted RBP17.47■□□□□ 0.39
CCDC144NL-202ENST00000539177 SIRT2Q8IXJ6 389 aa17.47■□□□□ 0.39
CCDC144NL-202ENST00000539177 AGBL1Q96MI9 1066 aa17.47■□□□□ 0.39
CCDC144NL-202ENST00000539177 STRBPQ96SI9 672 aaKnown RBP17.47■□□□□ 0.39
CCDC144NL-202ENST00000539177 C1QTNF1Q9BXJ1 281 aa17.47■□□□□ 0.39
CCDC144NL-202ENST00000539177 A1CFQ9NQ94 594 aaKnown RBP17.47■□□□□ 0.39
CCDC144NL-202ENST00000539177 PDGFCQ9NRA1 345 aa17.47■□□□□ 0.39
CCDC144NL-202ENST00000539177 RNF146Q9NTX7 359 aa17.47■□□□□ 0.39
CCDC144NL-202ENST00000539177 PCDHA11Q9Y5I1 949 aa17.47■□□□□ 0.39
CCDC144NL-202ENST00000539177 GSG1L2A8MUP6 293 aa17.46■□□□□ 0.39
CCDC144NL-202ENST00000539177 HMMRO75330 724 aa17.46■□□□□ 0.39
CCDC144NL-202ENST00000539177 BMP3P12645 472 aa17.46■□□□□ 0.39
CCDC144NL-202ENST00000539177 OAZ1P54368 228 aa17.46■□□□□ 0.39
CCDC144NL-202ENST00000539177 TTLL4Q14679 1199 aa17.46■□□□□ 0.39
CCDC144NL-202ENST00000539177 SLFN13Q68D06 897 aa17.46■□□□□ 0.39
CCDC144NL-202ENST00000539177 KRT40Q6A162 431 aa17.46■□□□□ 0.39
CCDC144NL-202ENST00000539177 DEFB128Q7Z7B8 93 aa17.46■□□□□ 0.39
CCDC144NL-202ENST00000539177 RPUSD2Q8IZ73 545 aaKnown RBP17.46■□□□□ 0.39
CCDC144NL-202ENST00000539177 VWCEQ96DN2 955 aa17.46■□□□□ 0.39
CCDC144NL-202ENST00000539177 COG6Q9Y2V7 657 aa17.46■□□□□ 0.39
CCDC144NL-202ENST00000539177 TRIP12Q14669 1992 aaPredicted RBP17.46■□□□□ 0.39
CCDC144NL-202ENST00000539177 XIRP2A4UGR9 3374 aa17.45■□□□□ 0.38
CCDC144NL-202ENST00000539177 ASB14A6NK59 587 aa17.45■□□□□ 0.38
CCDC144NL-202ENST00000539177 TMEM232C9JQI7 657 aa17.45■□□□□ 0.38
CCDC144NL-202ENST00000539177 ZEB2O60315 1214 aa17.45■□□□□ 0.38
CCDC144NL-202ENST00000539177 RAB11FIP3O75154 756 aa17.45■□□□□ 0.38
CCDC144NL-202ENST00000539177 CA3P07451 260 aa17.45■□□□□ 0.38
CCDC144NL-202ENST00000539177 CYP2C9P11712 490 aa17.45■□□□□ 0.38
CCDC144NL-202ENST00000539177 IKQ13123 557 aaPredicted RBP17.45■□□□□ 0.38
CCDC144NL-202ENST00000539177 AAK1Q2M2I8 961 aa17.45■□□□□ 0.38
CCDC144NL-202ENST00000539177 RPAP2Q8IXW5 612 aaPredicted RBP17.45■□□□□ 0.38
CCDC144NL-202ENST00000539177 ZNF444Q8N0Y2 327 aaPredicted RBP17.45■□□□□ 0.38
CCDC144NL-202ENST00000539177 EPB41L4AQ9HCS5 686 aaPredicted RBP17.45■□□□□ 0.38
CCDC144NL-202ENST00000539177 TET1Q8NFU7 2136 aa17.44■□□□□ 0.38
CCDC144NL-202ENST00000539177 EPOPA6NHQ4 379 aa17.44■□□□□ 0.38
CCDC144NL-202ENST00000539177 ERC2O15083 957 aa17.44■□□□□ 0.38
CCDC144NL-202ENST00000539177 GTPBP6O43824 516 aaPredicted RBP17.44■□□□□ 0.38
CCDC144NL-202ENST00000539177 TTLL1O95922 423 aa17.44■□□□□ 0.38
CCDC144NL-202ENST00000539177 ALAS1P13196 640 aa17.44■□□□□ 0.38
CCDC144NL-202ENST00000539177 TDO2P48775 406 aa17.44■□□□□ 0.38
CCDC144NL-202ENST00000539177 SNAP25P60880 206 aa17.44■□□□□ 0.38
CCDC144NL-202ENST00000539177 GMCL1P1Q8NEA9 526 aa17.44■□□□□ 0.38
CCDC144NL-202ENST00000539177 EPHX3Q9H6B9 360 aa17.44■□□□□ 0.38
CCDC144NL-202ENST00000539177 TRMT13Q9NUP7 481 aaKnown RBP17.44■□□□□ 0.38
CCDC144NL-202ENST00000539177 MTMR4Q9NYA4 1195 aa17.44■□□□□ 0.38
CCDC144NL-202ENST00000539177 MTCH2Q9Y6C9 303 aa17.44■□□□□ 0.38
CCDC144NL-202ENST00000539177 ZNF536O15090 1300 aa17.44■□□□□ 0.38
CCDC144NL-202ENST00000539177 SMARCA5O60264 1052 aaPredicted RBP17.43■□□□□ 0.38
CCDC144NL-202ENST00000539177 HOXD11P31277 338 aaPredicted RBP17.43■□□□□ 0.38
CCDC144NL-202ENST00000539177 STAT2P52630 851 aa17.43■□□□□ 0.38
CCDC144NL-202ENST00000539177 TMEM67Q5HYA8 995 aa17.43■□□□□ 0.38
CCDC144NL-202ENST00000539177 TAPT1Q6NXT6 567 aa17.43■□□□□ 0.38
CCDC144NL-202ENST00000539177 PPP1R13LQ8WUF5 828 aa17.43■□□□□ 0.38
CCDC144NL-202ENST00000539177 OSBP2Q969R2 916 aa17.43■□□□□ 0.38
CCDC144NL-202ENST00000539177 MKL1Q969V6 931 aa17.43■□□□□ 0.38
CCDC144NL-202ENST00000539177 TRERF1Q96PN7 1200 aa17.43■□□□□ 0.38
CCDC144NL-202ENST00000539177 PURBQ96QR8 312 aaKnown RBP17.43■□□□□ 0.38
CCDC144NL-202ENST00000539177 LRFN3Q9BTN0 628 aa17.43■□□□□ 0.38
CCDC144NL-202ENST00000539177 ALDH8A1Q9H2A2 487 aaPredicted RBP17.43■□□□□ 0.38
CCDC144NL-202ENST00000539177 SCN10AQ9Y5Y9 1956 aa17.42■□□□□ 0.38
CCDC144NL-202ENST00000539177 HNRNPUQ00839 825 aaKnown RBP eCLIP17.42■□□□□ 0.38
CCDC144NL-202ENST00000539177 MUM1L1Q5H9M0 696 aa17.42■□□□□ 0.38
CCDC144NL-202ENST00000539177 KIAA1211Q6ZU35 1233 aa17.42■□□□□ 0.38
CCDC144NL-202ENST00000539177 RASGRP2Q7LDG7 609 aa17.42■□□□□ 0.38
CCDC144NL-202ENST00000539177 ARNTL2Q8WYA1 636 aa17.42■□□□□ 0.38
CCDC144NL-202ENST00000539177 TNKSO95271 1327 aa17.42■□□□□ 0.38
CCDC144NL-202ENST00000539177 GPAA1O43292 621 aa17.41■□□□□ 0.38
CCDC144NL-202ENST00000539177 ARHGEF15O94989 841 aa17.41■□□□□ 0.38
CCDC144NL-202ENST00000539177 APPP05067 770 aa17.41■□□□□ 0.38
CCDC144NL-202ENST00000539177 TSPY3P0CV98 308 aa17.41■□□□□ 0.38
CCDC144NL-202ENST00000539177 TSPY8P0CW00 308 aa17.41■□□□□ 0.38
CCDC144NL-202ENST00000539177 IQSEC1Q6DN90 963 aa17.41■□□□□ 0.38
CCDC144NL-202ENST00000539177 GIMAP6Q6P9H5 292 aa17.41■□□□□ 0.38
CCDC144NL-202ENST00000539177 NSMFQ6X4W1 530 aa17.41■□□□□ 0.38
CCDC144NL-202ENST00000539177 HCN4Q9Y3Q4 1203 aa17.41■□□□□ 0.38
CCDC144NL-202ENST00000539177 TRANK1O15050 2925 aa17.41■□□□□ 0.38
CCDC144NL-202ENST00000539177 PLIN4Q96Q06 1357 aa17.4■□□□□ 0.38
CCDC144NL-202ENST00000539177 M0R2C6 588 aa17.4■□□□□ 0.38
CCDC144NL-202ENST00000539177 PFKMP08237 780 aa17.4■□□□□ 0.38
CCDC144NL-202ENST00000539177 MYL3P08590 195 aa17.4■□□□□ 0.38
CCDC144NL-202ENST00000539177 FDX1P10109 184 aa17.4■□□□□ 0.38
CCDC144NL-202ENST00000539177 MCCP23508 829 aa17.4■□□□□ 0.38
CCDC144NL-202ENST00000539177 SLC1A4P43007 532 aa17.4■□□□□ 0.38
CCDC144NL-202ENST00000539177 TKFCQ3LXA3 575 aa17.4■□□□□ 0.38
CCDC144NL-202ENST00000539177 KCTD1Q719H9 257 aa17.4■□□□□ 0.38
CCDC144NL-202ENST00000539177 FAM160B2Q86V87 743 aa17.4■□□□□ 0.38
CCDC144NL-202ENST00000539177 CHURC1Q8WUH1 139 aa17.4■□□□□ 0.38
CCDC144NL-202ENST00000539177 STAG1Q8WVM7 1258 aa17.4■□□□□ 0.38
CCDC144NL-202ENST00000539177 APPBP2Q92624 585 aa17.4■□□□□ 0.38
CCDC144NL-202ENST00000539177 SEZ6LQ9BYH1 1024 aa17.4■□□□□ 0.38
CCDC144NL-202ENST00000539177 ZNF287Q9HBT7 754 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms