RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 FAM43AQ8N2R8 423 aa11.76□□□□□ -0.53
CLPB-210ENST00000539148 SHCBP1Q8NEM2 672 aa11.76□□□□□ -0.53
CLPB-210ENST00000539148 ATG4CQ96DT6 458 aa11.76□□□□□ -0.53
CLPB-210ENST00000539148 P2RX7Q99572 595 aaKnown RBP11.76□□□□□ -0.53
CLPB-210ENST00000539148 FBXO28Q9NVF7 368 aa11.76□□□□□ -0.53
CLPB-210ENST00000539148 IVNS1ABPQ9Y6Y0 642 aa11.76□□□□□ -0.53
CLPB-210ENST00000539148 STRNO43815 780 aa11.75□□□□□ -0.53
CLPB-210ENST00000539148 TLR2O60603 784 aa11.75□□□□□ -0.53
CLPB-210ENST00000539148 CTDNEP1O95476 244 aa11.75□□□□□ -0.53
CLPB-210ENST00000539148 VEGFBP49765 207 aa11.75□□□□□ -0.53
CLPB-210ENST00000539148 SNRNP48Q6IEG0 339 aaKnown RBP11.75□□□□□ -0.53
CLPB-210ENST00000539148 CCDC174Q6PII3 467 aa11.75□□□□□ -0.53
CLPB-210ENST00000539148 RIOX2Q8IUF8 465 aa11.75□□□□□ -0.53
CLPB-210ENST00000539148 TNS4Q8IZW8 715 aa11.75□□□□□ -0.53
CLPB-210ENST00000539148 PIBF1Q8WXW3 757 aa11.75□□□□□ -0.53
CLPB-210ENST00000539148 PAGR1Q9BTK6 254 aa11.75□□□□□ -0.53
CLPB-210ENST00000539148 CFHR5Q9BXR6 569 aa11.75□□□□□ -0.53
CLPB-210ENST00000539148 ACAD9Q9H845 621 aa11.75□□□□□ -0.53
CLPB-210ENST00000539148 SAGE1Q9NXZ1 904 aa11.75□□□□□ -0.53
CLPB-210ENST00000539148 SLC5A4Q9NY91 659 aa11.75□□□□□ -0.53
CLPB-210ENST00000539148 MORF4L1Q9UBU8 362 aa11.75□□□□□ -0.53
CLPB-210ENST00000539148 ATP6V1DQ9Y5K8 247 aa11.75□□□□□ -0.53
CLPB-210ENST00000539148 PFASO15067 1338 aa11.75□□□□□ -0.53
CLPB-210ENST00000539148 ZNFX1Q9P2E3 1918 aaKnown RBP11.74□□□□□ -0.53
CLPB-210ENST00000539148 IGF2BP3O00425 579 aaKnown RBP eCLIP11.74□□□□□ -0.53
CLPB-210ENST00000539148 JAK2O60674 1132 aa11.74□□□□□ -0.53
CLPB-210ENST00000539148 FOSP01100 380 aaPredicted RBP11.74□□□□□ -0.53
CLPB-210ENST00000539148 HSPA1AP0DMV8 641 aaKnown RBP11.74□□□□□ -0.53
CLPB-210ENST00000539148 HSPA1BP0DMV9 641 aaKnown RBP11.74□□□□□ -0.53
CLPB-210ENST00000539148 ALAS1P13196 640 aa11.74□□□□□ -0.53
CLPB-210ENST00000539148 MAPK4P31152 587 aa11.74□□□□□ -0.53
CLPB-210ENST00000539148 ADCY7P51828 1080 aa11.74□□□□□ -0.53
CLPB-210ENST00000539148 ERVK-9P63128 1117 aa11.74□□□□□ -0.53
CLPB-210ENST00000539148 ERVK-24P63145 666 aa11.74□□□□□ -0.53
CLPB-210ENST00000539148 DGKZQ13574 1117 aa11.74□□□□□ -0.53
CLPB-210ENST00000539148 USH1GQ495M9 461 aa11.74□□□□□ -0.53
CLPB-210ENST00000539148 PTPN18Q99952 460 aa11.74□□□□□ -0.53
CLPB-210ENST00000539148 SPATC1LQ9H0A9 340 aa11.74□□□□□ -0.53
CLPB-210ENST00000539148 CPVLQ9H3G5 476 aa11.74□□□□□ -0.53
CLPB-210ENST00000539148 PSTPIP2Q9H939 334 aa11.74□□□□□ -0.53
CLPB-210ENST00000539148 RAVER2Q9HCJ3 691 aaKnown RBP11.74□□□□□ -0.53
CLPB-210ENST00000539148 SMCO2A6NFE2 343 aa11.73□□□□□ -0.53
CLPB-210ENST00000539148 GCOM1H8Y6P7 765 aaPredicted RBP11.73□□□□□ -0.53
CLPB-210ENST00000539148 MGAMO43451 1857 aa11.73□□□□□ -0.53
CLPB-210ENST00000539148 AOC2O75106 756 aa11.73□□□□□ -0.53
CLPB-210ENST00000539148 CAPN15O75808 1086 aa11.73□□□□□ -0.53
CLPB-210ENST00000539148 POLR2MP0CAP2 368 aa11.73□□□□□ -0.53
CLPB-210ENST00000539148 CYP2C8P10632 490 aa11.73□□□□□ -0.53
CLPB-210ENST00000539148 DEKP35659 375 aaKnown RBP11.73□□□□□ -0.53
CLPB-210ENST00000539148 KCTD2Q14681 263 aa11.73□□□□□ -0.53
CLPB-210ENST00000539148 PKN1Q16512 942 aa11.73□□□□□ -0.53
CLPB-210ENST00000539148 WWC2Q6AWC2 1192 aa11.73□□□□□ -0.53
CLPB-210ENST00000539148 RASGRP2Q7LDG7 609 aa11.73□□□□□ -0.53
CLPB-210ENST00000539148 NCAPG2Q86XI2 1143 aa11.73□□□□□ -0.53
CLPB-210ENST00000539148 FBXO18Q8NFZ0 1043 aa11.73□□□□□ -0.53
CLPB-210ENST00000539148 TRERF1Q96PN7 1200 aa11.73□□□□□ -0.53
CLPB-210ENST00000539148 NAP1L4Q99733 375 aaKnown RBP11.73□□□□□ -0.53
CLPB-210ENST00000539148 ZMYND12Q9H0C1 365 aa11.73□□□□□ -0.53
CLPB-210ENST00000539148 ZSCAN16Q9H4T2 348 aaPredicted RBP11.73□□□□□ -0.53
CLPB-210ENST00000539148 RNF146Q9NTX7 359 aa11.73□□□□□ -0.53
CLPB-210ENST00000539148 ZNF214Q9UL59 606 aaPredicted RBP11.73□□□□□ -0.53
CLPB-210ENST00000539148 SPDYE3A6NKU9 549 aa11.72□□□□□ -0.53
CLPB-210ENST00000539148 STXBP3O00186 592 aa11.72□□□□□ -0.53
CLPB-210ENST00000539148 STX6O43752 255 aa11.72□□□□□ -0.53
CLPB-210ENST00000539148 FCER1AP12319 257 aa11.72□□□□□ -0.53
CLPB-210ENST00000539148 FDPSP14324 419 aaKnown RBP11.72□□□□□ -0.53
CLPB-210ENST00000539148 KRT2P35908 639 aa11.72□□□□□ -0.53
CLPB-210ENST00000539148 ST3GAL1Q11201 340 aa11.72□□□□□ -0.53
CLPB-210ENST00000539148 AP3B2Q13367 1082 aa11.72□□□□□ -0.53
CLPB-210ENST00000539148 TMEM132BQ14DG7 1078 aa11.72□□□□□ -0.53
CLPB-210ENST00000539148 NOM1Q5C9Z4 860 aaKnown RBP11.72□□□□□ -0.53
CLPB-210ENST00000539148 L1TD1Q5T7N2 865 aaKnown RBP11.72□□□□□ -0.53
CLPB-210ENST00000539148 WDR78Q5VTH9 848 aa11.72□□□□□ -0.53
CLPB-210ENST00000539148 ABRAQ8N0Z2 381 aa11.72□□□□□ -0.53
CLPB-210ENST00000539148 REXO1Q8N1G1 1221 aaKnown RBP11.72□□□□□ -0.53
CLPB-210ENST00000539148 ANKRD35Q8N283 1001 aa11.72□□□□□ -0.53
CLPB-210ENST00000539148 ANKRD13CQ8N6S4 541 aa11.72□□□□□ -0.53
CLPB-210ENST00000539148 DAGLBQ8NCG7 672 aa11.72□□□□□ -0.53
CLPB-210ENST00000539148 SPRYD3Q8NCJ5 442 aa11.72□□□□□ -0.53
CLPB-210ENST00000539148 GPKOWQ92917 476 aaPredicted RBP eCLIP11.72□□□□□ -0.53
CLPB-210ENST00000539148 TNPO1Q92973 898 aaKnown RBP11.72□□□□□ -0.53
CLPB-210ENST00000539148 FOXP1Q9H334 677 aaPredicted RBP11.72□□□□□ -0.53
CLPB-210ENST00000539148 RIC8AQ9NPQ8 531 aa11.72□□□□□ -0.53
CLPB-210ENST00000539148 FOXD4L1Q9NU39 408 aa11.72□□□□□ -0.53
CLPB-210ENST00000539148 RBPJLQ9UBG7 517 aa11.72□□□□□ -0.53
CLPB-210ENST00000539148 ADD3Q9UEY8 706 aaKnown RBP11.72□□□□□ -0.53
CLPB-210ENST00000539148 PCDHA4Q9UN74 947 aa11.72□□□□□ -0.53
CLPB-210ENST00000539148 PLXNB2O15031 1838 aa11.72□□□□□ -0.53
CLPB-210ENST00000539148 ZNF536O15090 1300 aa11.71□□□□□ -0.53
CLPB-210ENST00000539148 LOC102724159A0A0B4J2E5 919 aa11.71□□□□□ -0.53
CLPB-210ENST00000539148 CCDC194A0A1B0GVG4 234 aa11.71□□□□□ -0.53
CLPB-210ENST00000539148 hCG_1642624A0A1W2PR95 340 aa11.71□□□□□ -0.53
CLPB-210ENST00000539148 VPS37CA5D8V6 355 aaPredicted RBP11.71□□□□□ -0.53
CLPB-210ENST00000539148 PIK3CDO00329 1044 aa11.71□□□□□ -0.53
CLPB-210ENST00000539148 GNRH1P01148 92 aa11.71□□□□□ -0.53
CLPB-210ENST00000539148 MMP1P03956 469 aa11.71□□□□□ -0.53
CLPB-210ENST00000539148 SYT1P21579 422 aa11.71□□□□□ -0.53
CLPB-210ENST00000539148 HOXD10P28358 340 aa11.71□□□□□ -0.53
CLPB-210ENST00000539148 CRHR2Q13324 411 aa11.71□□□□□ -0.53
CLPB-210ENST00000539148 PWP2Q15269 919 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms