RNA–Protein interactions for RNA: ENST00000538783.1

LINC02439-201, Transcript of long intergenic non-protein coding RNA 2439, humanhuman

TSL 3 BASIC

Gene LINC02439, Length 450 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02439-201ENST00000538783 CDX2Q99626 313 aaPredicted RBP11.18□□□□□ -0.62
LINC02439-201ENST00000538783 TMEM47Q9BQJ4 181 aa11.18□□□□□ -0.62
LINC02439-201ENST00000538783 LNPKQ9C0E8 428 aa11.18□□□□□ -0.62
LINC02439-201ENST00000538783 UPF3AQ9H1J1 476 aaKnown RBP11.18□□□□□ -0.62
LINC02439-201ENST00000538783 RNF41Q9H4P4 317 aaPredicted RBP11.18□□□□□ -0.62
LINC02439-201ENST00000538783 GPCPD1Q9NPB8 672 aa11.18□□□□□ -0.62
LINC02439-201ENST00000538783 CYP39A1Q9NYL5 469 aa11.18□□□□□ -0.62
LINC02439-201ENST00000538783 SALL3Q9BXA9 1300 aa11.17□□□□□ -0.62
LINC02439-201ENST00000538783 A0A0D9SFI3 127 aa11.17□□□□□ -0.62
LINC02439-201ENST00000538783 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.17□□□□□ -0.62
LINC02439-201ENST00000538783 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.17□□□□□ -0.62
LINC02439-201ENST00000538783 FOXP2O15409 715 aa11.17□□□□□ -0.62
LINC02439-201ENST00000538783 FGRP09769 529 aa11.17□□□□□ -0.62
LINC02439-201ENST00000538783 HSPD1P10809 573 aaKnown RBP11.17□□□□□ -0.62
LINC02439-201ENST00000538783 PCP11498 1178 aaKnown RBP11.17□□□□□ -0.62
LINC02439-201ENST00000538783 CDK7P50613 346 aa11.17□□□□□ -0.62
LINC02439-201ENST00000538783 EPHB4P54760 987 aa11.17□□□□□ -0.62
LINC02439-201ENST00000538783 HAND2P61296 217 aa11.17□□□□□ -0.62
LINC02439-201ENST00000538783 BEX3Q00994 111 aa11.17□□□□□ -0.62
LINC02439-201ENST00000538783 NMIQ13287 307 aaPredicted RBP11.17□□□□□ -0.62
LINC02439-201ENST00000538783 FSCN1Q16658 493 aaKnown RBP11.17□□□□□ -0.62
LINC02439-201ENST00000538783 MFSD5Q6N075 450 aa11.17□□□□□ -0.62
LINC02439-201ENST00000538783 CXCL17Q6UXB2 119 aa11.17□□□□□ -0.62
LINC02439-201ENST00000538783 KIAA1211Q6ZU35 1233 aa11.17□□□□□ -0.62
LINC02439-201ENST00000538783 EEPD1Q7L9B9 569 aa11.17□□□□□ -0.62
LINC02439-201ENST00000538783 TLK2Q86UE8 772 aa11.17□□□□□ -0.62
LINC02439-201ENST00000538783 YTHDC1Q96MU7 727 aaKnown RBP11.17□□□□□ -0.62
LINC02439-201ENST00000538783 TTC14Q96N46 770 aa11.17□□□□□ -0.62
LINC02439-201ENST00000538783 TCP11L1Q9NUJ3 509 aa11.17□□□□□ -0.62
LINC02439-201ENST00000538783 FRMPD2Q68DX3 1309 aaPredicted RBP11.16□□□□□ -0.62
LINC02439-201ENST00000538783 CCDC171Q6TFL3 1326 aa11.16□□□□□ -0.62
LINC02439-201ENST00000538783 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.16□□□□□ -0.62
LINC02439-201ENST00000538783 PTPDC1A2A3K4 754 aa11.16□□□□□ -0.62
LINC02439-201ENST00000538783 ZNF213O14771 459 aa11.16□□□□□ -0.62
LINC02439-201ENST00000538783 ADCY6O43306 1168 aa11.16□□□□□ -0.62
LINC02439-201ENST00000538783 SMPD1P17405 629 aa11.16□□□□□ -0.62
LINC02439-201ENST00000538783 IRX5P78411 483 aaPredicted RBP11.16□□□□□ -0.62
LINC02439-201ENST00000538783 BAATQ14032 418 aaPredicted RBP11.16□□□□□ -0.62
LINC02439-201ENST00000538783 BRDTQ58F21 947 aaPredicted RBP11.16□□□□□ -0.62
LINC02439-201ENST00000538783 MUM1L1Q5H9M0 696 aa11.16□□□□□ -0.62
LINC02439-201ENST00000538783 AKNAD1Q5T1N1 836 aa11.16□□□□□ -0.62
LINC02439-201ENST00000538783 TTBK2Q6IQ55 1244 aa11.16□□□□□ -0.62
LINC02439-201ENST00000538783 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.16□□□□□ -0.62
LINC02439-201ENST00000538783 FBXO16Q8IX29 292 aaPredicted RBP11.16□□□□□ -0.62
LINC02439-201ENST00000538783 ESR2Q92731 530 aa11.16□□□□□ -0.62
LINC02439-201ENST00000538783 SEZ6LQ9BYH1 1024 aa11.16□□□□□ -0.62
LINC02439-201ENST00000538783 KATNBL1Q9H079 304 aa11.16□□□□□ -0.62
LINC02439-201ENST00000538783 RANBP17Q9H2T7 1088 aaKnown RBP11.16□□□□□ -0.62
LINC02439-201ENST00000538783 VTA1Q9NP79 307 aa11.16□□□□□ -0.62
LINC02439-201ENST00000538783 DIAPH3Q9NSV4 1193 aa11.16□□□□□ -0.62
LINC02439-201ENST00000538783 TBX21Q9UL17 535 aa11.16□□□□□ -0.62
LINC02439-201ENST00000538783 FRMPD3Q5JV73 1810 aa11.15□□□□□ -0.62
LINC02439-201ENST00000538783 TMEM265A0A087WTH1 108 aa11.15□□□□□ -0.62
LINC02439-201ENST00000538783 B4DLN1 442 aa11.15□□□□□ -0.62
LINC02439-201ENST00000538783 FOSL2P15408 326 aa11.15□□□□□ -0.62
LINC02439-201ENST00000538783 SDSP20132 328 aa11.15□□□□□ -0.62
LINC02439-201ENST00000538783 CALML3P27482 149 aa11.15□□□□□ -0.62
LINC02439-201ENST00000538783 NOVP48745 357 aa11.15□□□□□ -0.62
LINC02439-201ENST00000538783 MRPL12P52815 198 aaKnown RBP11.15□□□□□ -0.62
LINC02439-201ENST00000538783 ITGA7Q13683 1181 aa11.15□□□□□ -0.62
LINC02439-201ENST00000538783 CCDC178Q5BJE1 867 aa11.15□□□□□ -0.62
LINC02439-201ENST00000538783 BTNL9Q6UXG8 535 aa11.15□□□□□ -0.62
LINC02439-201ENST00000538783 RNF207Q6ZRF8 634 aa11.15□□□□□ -0.62
LINC02439-201ENST00000538783 RASGRP2Q7LDG7 609 aa11.15□□□□□ -0.62
LINC02439-201ENST00000538783 MAFAQ8NHW3 353 aaPredicted RBP11.15□□□□□ -0.62
LINC02439-201ENST00000538783 WDR11Q9BZH6 1224 aa11.15□□□□□ -0.62
LINC02439-201ENST00000538783 PPP1R12CQ9BZL4 782 aa11.15□□□□□ -0.62
LINC02439-201ENST00000538783 MTIF3Q9H2K0 278 aaKnown RBP11.15□□□□□ -0.62
LINC02439-201ENST00000538783 GPHNQ9NQX3 736 aaPredicted RBP11.15□□□□□ -0.62
LINC02439-201ENST00000538783 PDGFCQ9NRA1 345 aa11.15□□□□□ -0.62
LINC02439-201ENST00000538783 GNEQ9Y223 722 aaKnown RBP11.15□□□□□ -0.62
LINC02439-201ENST00000538783 Q9Y3F1 56 aa11.15□□□□□ -0.62
LINC02439-201ENST00000538783 GREB1LQ9C091 1923 aaPredicted RBP11.15□□□□□ -0.62
LINC02439-201ENST00000538783 SMCHD1A6NHR9 2005 aa11.14□□□□□ -0.63
LINC02439-201ENST00000538783 COL11A1P12107 1806 aaPredicted RBP11.14□□□□□ -0.63
LINC02439-201ENST00000538783 ZMYM6O95789 1325 aa11.14□□□□□ -0.63
LINC02439-201ENST00000538783 LOC102724159A0A0B4J2E5 919 aa11.14□□□□□ -0.63
LINC02439-201ENST00000538783 HIP1O00291 1037 aa11.14□□□□□ -0.63
LINC02439-201ENST00000538783 CTAGE5O15320 804 aa11.14□□□□□ -0.63
LINC02439-201ENST00000538783 PDHBP11177 359 aa11.14□□□□□ -0.63
LINC02439-201ENST00000538783 CSF2RAP15509 400 aa11.14□□□□□ -0.63
LINC02439-201ENST00000538783 NT5C2P49902 561 aa11.14□□□□□ -0.63
LINC02439-201ENST00000538783 NKX3-2P78367 333 aa11.14□□□□□ -0.63
LINC02439-201ENST00000538783 PDE4DQ08499 809 aa11.14□□□□□ -0.63
LINC02439-201ENST00000538783 PWP2Q15269 919 aaKnown RBP11.14□□□□□ -0.63
LINC02439-201ENST00000538783 PSRC1Q6PGN9 363 aaPredicted RBP11.14□□□□□ -0.63
LINC02439-201ENST00000538783 CWC27Q6UX04 472 aaKnown RBP11.14□□□□□ -0.63
LINC02439-201ENST00000538783 ZNF589Q86UQ0 364 aaPredicted RBP11.14□□□□□ -0.63
LINC02439-201ENST00000538783 CHD1LQ86WJ1 897 aa11.14□□□□□ -0.63
LINC02439-201ENST00000538783 IQCA1Q86XH1 822 aa11.14□□□□□ -0.63
LINC02439-201ENST00000538783 FAM126BQ8IXS8 530 aa11.14□□□□□ -0.63
LINC02439-201ENST00000538783 MYLIPQ8WY64 445 aa11.14□□□□□ -0.63
LINC02439-201ENST00000538783 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.14□□□□□ -0.63
LINC02439-201ENST00000538783 TTYH1Q9H313 450 aaPredicted RBP11.14□□□□□ -0.63
LINC02439-201ENST00000538783 DDX49Q9Y6V7 483 aaKnown RBP11.14□□□□□ -0.63
LINC02439-201ENST00000538783 ZNFX1Q9P2E3 1918 aaKnown RBP11.13□□□□□ -0.63
LINC02439-201ENST00000538783 RAD50Q92878 1312 aa11.13□□□□□ -0.63
LINC02439-201ENST00000538783 NFIBO00712 420 aa11.13□□□□□ -0.63
LINC02439-201ENST00000538783 ACRP10323 421 aa11.13□□□□□ -0.63
LINC02439-201ENST00000538783 DNAJB2P25686 324 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms