RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 PURBQ96QR8 312 aaKnown RBP10.04□□□□□ -0.8
SNHG1-209ENST00000538654 EHD4Q9H223 541 aa10.04□□□□□ -0.8
SNHG1-209ENST00000538654 SNX12Q9UMY4 172 aa10.04□□□□□ -0.8
SNHG1-209ENST00000538654 MYH13Q9UKX3 1938 aa10.04□□□□□ -0.8
SNHG1-209ENST00000538654 ARHGAP23Q9P227 1491 aa10.04□□□□□ -0.8
SNHG1-209ENST00000538654 IFIT3O14879 490 aaKnown RBP10.03□□□□□ -0.8
SNHG1-209ENST00000538654 TCP1P17987 556 aaKnown RBP10.03□□□□□ -0.8
SNHG1-209ENST00000538654 LMNB1P20700 586 aa10.03□□□□□ -0.8
SNHG1-209ENST00000538654 CCDC40Q4G0X9 1142 aa10.03□□□□□ -0.8
SNHG1-209ENST00000538654 ZNF658Q5TYW1 1059 aaPredicted RBP10.03□□□□□ -0.8
SNHG1-209ENST00000538654 SMYD4Q8IYR2 804 aaPredicted RBP10.03□□□□□ -0.8
SNHG1-209ENST00000538654 OSCARQ8IYS5 282 aa10.03□□□□□ -0.8
SNHG1-209ENST00000538654 C3orf20Q8ND61 904 aa10.03□□□□□ -0.8
SNHG1-209ENST00000538654 OXER1Q8TDS5 423 aa10.03□□□□□ -0.8
SNHG1-209ENST00000538654 NELFBQ8WX92 580 aa10.03□□□□□ -0.8
SNHG1-209ENST00000538654 SYMPKQ92797 1274 aaKnown RBP10.03□□□□□ -0.8
SNHG1-209ENST00000538654 CHST12Q9NRB3 414 aa10.03□□□□□ -0.8
SNHG1-209ENST00000538654 STIM2Q9P246 746 aa10.03□□□□□ -0.8
SNHG1-209ENST00000538654 KCNJ14Q9UNX9 436 aa10.03□□□□□ -0.8
SNHG1-209ENST00000538654 PHF8Q9UPP1 1060 aa10.03□□□□□ -0.8
SNHG1-209ENST00000538654 DIS3Q9Y2L1 958 aaKnown RBP10.03□□□□□ -0.8
SNHG1-209ENST00000538654 CHD4Q14839 1912 aa10.03□□□□□ -0.8
SNHG1-209ENST00000538654 PDE2AO00408 941 aaPredicted RBP10.03□□□□□ -0.8
SNHG1-209ENST00000538654 USO1O60763 962 aaKnown RBP10.03□□□□□ -0.8
SNHG1-209ENST00000538654 TACC1O75410 805 aa10.03□□□□□ -0.8
SNHG1-209ENST00000538654 LSP1P33241 339 aa10.03□□□□□ -0.8
SNHG1-209ENST00000538654 VAV2P52735 878 aa10.03□□□□□ -0.8
SNHG1-209ENST00000538654 PDCLQ13371 301 aa10.03□□□□□ -0.8
SNHG1-209ENST00000538654 SLC39A6Q13433 755 aa10.03□□□□□ -0.8
SNHG1-209ENST00000538654 TTMPQ5BVD1 217 aa10.03□□□□□ -0.8
SNHG1-209ENST00000538654 WLSQ5T9L3 541 aa10.03□□□□□ -0.8
SNHG1-209ENST00000538654 NAA35Q5VZE5 725 aa10.03□□□□□ -0.8
SNHG1-209ENST00000538654 CEP120Q8N960 986 aa10.03□□□□□ -0.8
SNHG1-209ENST00000538654 MAGEC3Q8TD91 643 aa10.03□□□□□ -0.8
SNHG1-209ENST00000538654 KRT23Q9C075 422 aa10.03□□□□□ -0.8
SNHG1-209ENST00000538654 CABP5Q9NP86 173 aa10.03□□□□□ -0.8
SNHG1-209ENST00000538654 LRP6O75581 1613 aa10.03□□□□□ -0.8
SNHG1-209ENST00000538654 A0A087X0B3 334 aa10.03□□□□□ -0.8
SNHG1-209ENST00000538654 ADD2P35612 726 aa10.03□□□□□ -0.8
SNHG1-209ENST00000538654 ZAP70P43403 619 aa10.03□□□□□ -0.8
SNHG1-209ENST00000538654 DNM2P50570 870 aa10.03□□□□□ -0.8
SNHG1-209ENST00000538654 CDK17Q00537 523 aa10.03□□□□□ -0.8
SNHG1-209ENST00000538654 ALX1Q15699 326 aa10.03□□□□□ -0.8
SNHG1-209ENST00000538654 CEP85LQ5SZL2 805 aa10.03□□□□□ -0.8
SNHG1-209ENST00000538654 RNF187Q5TA31 235 aaPredicted RBP10.03□□□□□ -0.8
SNHG1-209ENST00000538654 PHLDB3Q6NSJ2 640 aa10.03□□□□□ -0.8
SNHG1-209ENST00000538654 CCDC155Q8N6L0 562 aa10.03□□□□□ -0.8
SNHG1-209ENST00000538654 IQCDQ96DY2 449 aa10.03□□□□□ -0.8
SNHG1-209ENST00000538654 ZNF496Q96IT1 587 aaPredicted RBP10.03□□□□□ -0.8
SNHG1-209ENST00000538654 EPSTI1Q96J88 318 aa10.03□□□□□ -0.8
SNHG1-209ENST00000538654 COL4A3BPQ9Y5P4 624 aa10.03□□□□□ -0.8
SNHG1-209ENST00000538654 GCFC2P16383 781 aaKnown RBP10.02□□□□□ -0.81
SNHG1-209ENST00000538654 PAFAH1B1P43034 410 aa10.02□□□□□ -0.81
SNHG1-209ENST00000538654 NR5A1Q13285 461 aa10.02□□□□□ -0.81
SNHG1-209ENST00000538654 PPP2R5BQ15173 497 aa10.02□□□□□ -0.81
SNHG1-209ENST00000538654 UBE3CQ15386 1083 aa10.02□□□□□ -0.81
SNHG1-209ENST00000538654 SPA17Q15506 151 aa10.02□□□□□ -0.81
SNHG1-209ENST00000538654 CFAP58Q5T655 872 aa10.02□□□□□ -0.81
SNHG1-209ENST00000538654 WDR59Q6PJI9 974 aa10.02□□□□□ -0.81
SNHG1-209ENST00000538654 CREG2Q8IUH2 290 aa10.02□□□□□ -0.81
SNHG1-209ENST00000538654 CD302Q8IX05 232 aa10.02□□□□□ -0.81
SNHG1-209ENST00000538654 IFT20Q8IY31 132 aa10.02□□□□□ -0.81
SNHG1-209ENST00000538654 CRACR2BQ8N4Y2 399 aaPredicted RBP10.02□□□□□ -0.81
SNHG1-209ENST00000538654 SPATA4Q8NEY3 305 aa10.02□□□□□ -0.81
SNHG1-209ENST00000538654 ZNF473Q8WTR7 871 aaKnown RBP10.02□□□□□ -0.81
SNHG1-209ENST00000538654 NOC3LQ8WTT2 800 aaKnown RBP10.02□□□□□ -0.81
SNHG1-209ENST00000538654 MIEF2Q96C03 454 aa10.02□□□□□ -0.81
SNHG1-209ENST00000538654 RRP36Q96EU6 259 aaKnown RBP10.02□□□□□ -0.81
SNHG1-209ENST00000538654 LRRC1Q9BTT6 524 aa10.02□□□□□ -0.81
SNHG1-209ENST00000538654 RABEP2Q9H5N1 569 aa10.02□□□□□ -0.81
SNHG1-209ENST00000538654 SENP2Q9HC62 589 aa10.02□□□□□ -0.81
SNHG1-209ENST00000538654 SFMBT1Q9UHJ3 866 aa10.02□□□□□ -0.81
SNHG1-209ENST00000538654 ODF2LQ9ULJ1 636 aa10.02□□□□□ -0.81
SNHG1-209ENST00000538654 PDS5AQ29RF7 1337 aaKnown RBP10.02□□□□□ -0.81
SNHG1-209ENST00000538654 MYH6P13533 1939 aa10.02□□□□□ -0.81
SNHG1-209ENST00000538654 ZNF185O15231 689 aa10.02□□□□□ -0.81
SNHG1-209ENST00000538654 RASSF9O75901 435 aa10.02□□□□□ -0.81
SNHG1-209ENST00000538654 PARP1P09874 1014 aaKnown RBP10.02□□□□□ -0.81
SNHG1-209ENST00000538654 MRPL12P52815 198 aaKnown RBP10.02□□□□□ -0.81
SNHG1-209ENST00000538654 SNCBQ16143 134 aa10.02□□□□□ -0.81
SNHG1-209ENST00000538654 PTGISQ16647 500 aa10.02□□□□□ -0.81
SNHG1-209ENST00000538654 TTC19Q6DKK2 380 aaPredicted RBP10.02□□□□□ -0.81
SNHG1-209ENST00000538654 TAX1BP1Q86VP1 789 aa10.02□□□□□ -0.81
SNHG1-209ENST00000538654 ARFGAP2Q8N6H7 521 aa10.02□□□□□ -0.81
SNHG1-209ENST00000538654 ARL8AQ96BM9 186 aa10.02□□□□□ -0.81
SNHG1-209ENST00000538654 ALS2CR12Q96Q35 445 aa10.02□□□□□ -0.81
SNHG1-209ENST00000538654 MYL10Q9BUA6 226 aa10.02□□□□□ -0.81
SNHG1-209ENST00000538654 THAP9Q9H5L6 903 aa10.02□□□□□ -0.81
SNHG1-209ENST00000538654 PRKAG2Q9UGJ0 569 aa10.02□□□□□ -0.81
SNHG1-209ENST00000538654 DISP2A7MBM2 1401 aa10.01□□□□□ -0.81
SNHG1-209ENST00000538654 ERICH2A1L162 156 aa10.01□□□□□ -0.81
SNHG1-209ENST00000538654 HMGB1P1B2RPK0 211 aaPredicted RBP10.01□□□□□ -0.81
SNHG1-209ENST00000538654 FAM107AO95990 144 aa10.01□□□□□ -0.81
SNHG1-209ENST00000538654 EZRP15311 586 aaKnown RBP10.01□□□□□ -0.81
SNHG1-209ENST00000538654 GUCY1A2P33402 732 aa10.01□□□□□ -0.81
SNHG1-209ENST00000538654 ZBED6P86452 979 aa10.01□□□□□ -0.81
SNHG1-209ENST00000538654 IFFO1Q0D2I5 559 aa10.01□□□□□ -0.81
SNHG1-209ENST00000538654 CRYMQ14894 314 aa10.01□□□□□ -0.81
SNHG1-209ENST00000538654 CCDC57Q2TAC2 916 aa10.01□□□□□ -0.81
SNHG1-209ENST00000538654 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms