RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 MAP3K12Q12852 859 aa20.69■□□□□ 0.9
SFSWAP-207ENST00000538548 C8orf74Q6P047 294 aa20.69■□□□□ 0.9
SFSWAP-207ENST00000538548 GIMAP7Q8NHV1 300 aa20.69■□□□□ 0.9
SFSWAP-207ENST00000538548 SMCR8Q8TEV9 937 aaPredicted RBP20.69■□□□□ 0.9
SFSWAP-207ENST00000538548 ZNF473Q8WTR7 871 aaKnown RBP20.69■□□□□ 0.9
SFSWAP-207ENST00000538548 TUBGCP2Q9BSJ2 902 aa20.69■□□□□ 0.9
SFSWAP-207ENST00000538548 PSMA7O14818 248 aa20.68■□□□□ 0.9
SFSWAP-207ENST00000538548 GNAT2P19087 354 aa20.68■□□□□ 0.9
SFSWAP-207ENST00000538548 TRAPPC10P48553 1259 aa20.68■□□□□ 0.9
SFSWAP-207ENST00000538548 MRPS25P82663 173 aaKnown RBP20.68■□□□□ 0.9
SFSWAP-207ENST00000538548 ACTN3Q08043 901 aaPredicted RBP20.68■□□□□ 0.9
SFSWAP-207ENST00000538548 NPY5RQ15761 445 aa20.68■□□□□ 0.9
SFSWAP-207ENST00000538548 FIGNQ5HY92 759 aa20.68■□□□□ 0.9
SFSWAP-207ENST00000538548 ALS2CR12Q96Q35 445 aa20.68■□□□□ 0.9
SFSWAP-207ENST00000538548 CNNM1Q9NRU3 951 aa20.68■□□□□ 0.9
SFSWAP-207ENST00000538548 A0A1W2PQJ5 194 aa20.68■□□□□ 0.9
SFSWAP-207ENST00000538548 TBC1D8BQ0IIM8 1120 aa20.68■□□□□ 0.9
SFSWAP-207ENST00000538548 KCNB1Q14721 858 aa20.68■□□□□ 0.9
SFSWAP-207ENST00000538548 PTGISQ16647 500 aa20.68■□□□□ 0.9
SFSWAP-207ENST00000538548 CFAP58Q5T655 872 aa20.68■□□□□ 0.9
SFSWAP-207ENST00000538548 IFIH1Q9BYX4 1025 aaKnown RBP20.68■□□□□ 0.9
SFSWAP-207ENST00000538548 KLC4Q9NSK0 619 aa20.68■□□□□ 0.9
SFSWAP-207ENST00000538548 V9GY48 417 aaPredicted RBP20.68■□□□□ 0.9
SFSWAP-207ENST00000538548 SRRM3A6NNA2 597 aaPredicted RBP20.67■□□□□ 0.9
SFSWAP-207ENST00000538548 PAFAH1B1P43034 410 aa20.67■□□□□ 0.9
SFSWAP-207ENST00000538548 GUCY1A3Q02108 690 aa20.67■□□□□ 0.9
SFSWAP-207ENST00000538548 SEC23AQ15436 765 aa20.67■□□□□ 0.9
SFSWAP-207ENST00000538548 IL17AQ16552 155 aa20.67■□□□□ 0.9
SFSWAP-207ENST00000538548 NFRKBQ6P4R8 1299 aa20.67■□□□□ 0.9
SFSWAP-207ENST00000538548 TNKSO95271 1327 aa20.67■□□□□ 0.9
SFSWAP-207ENST00000538548 ZNF233A6NK53 670 aa20.67■□□□□ 0.9
SFSWAP-207ENST00000538548 PRKAB2O43741 272 aa20.67■□□□□ 0.9
SFSWAP-207ENST00000538548 PDE8BO95263 885 aa20.67■□□□□ 0.9
SFSWAP-207ENST00000538548 NR1D1P20393 614 aa20.67■□□□□ 0.9
SFSWAP-207ENST00000538548 ITGA6P23229 1130 aa20.67■□□□□ 0.9
SFSWAP-207ENST00000538548 STAT6P42226 847 aa20.67■□□□□ 0.9
SFSWAP-207ENST00000538548 DRP2Q13474 957 aa20.67■□□□□ 0.9
SFSWAP-207ENST00000538548 CCDC40Q4G0X9 1142 aa20.67■□□□□ 0.9
SFSWAP-207ENST00000538548 TTI2Q6NXR4 508 aa20.67■□□□□ 0.9
SFSWAP-207ENST00000538548 CD302Q8IX05 232 aa20.67■□□□□ 0.9
SFSWAP-207ENST00000538548 IFT20Q8IY31 132 aa20.67■□□□□ 0.9
SFSWAP-207ENST00000538548 ZBTB38Q8NAP3 1195 aaPredicted RBP20.67■□□□□ 0.9
SFSWAP-207ENST00000538548 C1orf131Q8NDD1 294 aaKnown RBP20.67■□□□□ 0.9
SFSWAP-207ENST00000538548 CD248Q9HCU0 757 aa20.67■□□□□ 0.9
SFSWAP-207ENST00000538548 hCG_1642624A0A1W2PR95 340 aa20.66■□□□□ 0.9
SFSWAP-207ENST00000538548 RASSF9O75901 435 aa20.66■□□□□ 0.9
SFSWAP-207ENST00000538548 PREPLQ4J6C6 727 aaPredicted RBP20.66■□□□□ 0.9
SFSWAP-207ENST00000538548 KRT26Q7Z3Y9 468 aa20.66■□□□□ 0.9
SFSWAP-207ENST00000538548 MREGQ8N565 214 aa20.66■□□□□ 0.9
SFSWAP-207ENST00000538548 BANK1Q8NDB2 785 aa20.66■□□□□ 0.9
SFSWAP-207ENST00000538548 CCDC43Q96MW1 224 aaKnown RBP20.66■□□□□ 0.9
SFSWAP-207ENST00000538548 PCDHA13Q9Y5I0 950 aa20.66■□□□□ 0.9
SFSWAP-207ENST00000538548 MYH10P35580 1976 aa20.66■□□□□ 0.9
SFSWAP-207ENST00000538548 LONP1P36776 959 aaKnown RBP20.66■□□□□ 0.9
SFSWAP-207ENST00000538548 KLK7P49862 253 aa20.66■□□□□ 0.9
SFSWAP-207ENST00000538548 NLRP14Q86W24 1093 aa20.66■□□□□ 0.9
SFSWAP-207ENST00000538548 MYCBPAPQ8TBZ2 947 aa20.66■□□□□ 0.9
SFSWAP-207ENST00000538548 CCT8L2Q96SF2 557 aa20.66■□□□□ 0.9
SFSWAP-207ENST00000538548 MLXIPQ9HAP2 919 aa20.66■□□□□ 0.9
SFSWAP-207ENST00000538548 MCM8Q9UJA3 840 aa20.66■□□□□ 0.9
SFSWAP-207ENST00000538548 PNPLA7Q6ZV29 1317 aa20.65■□□□□ 0.9
SFSWAP-207ENST00000538548 MOCS3O95396 460 aa20.65■□□□□ 0.9
SFSWAP-207ENST00000538548 SEMA3FQ13275 785 aa20.65■□□□□ 0.9
SFSWAP-207ENST00000538548 RNF187Q5TA31 235 aaPredicted RBP20.65■□□□□ 0.9
SFSWAP-207ENST00000538548 ARL6IP4Q66PJ3 421 aaKnown RBP20.65■□□□□ 0.9
SFSWAP-207ENST00000538548 CCDC13Q8IYE1 715 aa20.65■□□□□ 0.9
SFSWAP-207ENST00000538548 CCDC155Q8N6L0 562 aa20.65■□□□□ 0.9
SFSWAP-207ENST00000538548 IQCDQ96DY2 449 aa20.65■□□□□ 0.9
SFSWAP-207ENST00000538548 GDF3Q9NR23 364 aa20.65■□□□□ 0.9
SFSWAP-207ENST00000538548 SLC4A4Q9Y6R1 1079 aa20.65■□□□□ 0.9
SFSWAP-207ENST00000538548 FAM107AO95990 144 aa20.65■□□□□ 0.9
SFSWAP-207ENST00000538548 HNRNPH3P31942 346 aaKnown RBP20.65■□□□□ 0.9
SFSWAP-207ENST00000538548 EVA1CP58658 441 aa20.65■□□□□ 0.9
SFSWAP-207ENST00000538548 CSGALNACT2Q8N6G5 542 aa20.65■□□□□ 0.9
SFSWAP-207ENST00000538548 SPATA5Q8NB90 893 aa20.65■□□□□ 0.9
SFSWAP-207ENST00000538548 PCMTD1Q96MG8 357 aaPredicted RBP20.65■□□□□ 0.9
SFSWAP-207ENST00000538548 GREM2Q9H772 168 aa20.65■□□□□ 0.9
SFSWAP-207ENST00000538548 RBM12Q9NTZ6 932 aaKnown RBP20.65■□□□□ 0.9
SFSWAP-207ENST00000538548 RBM28Q9NW13 759 aaKnown RBP20.65■□□□□ 0.9
SFSWAP-207ENST00000538548 UBR2Q8IWV8 1755 aa20.65■□□□□ 0.9
SFSWAP-207ENST00000538548 MYL1P05976 194 aa20.64■□□□□ 0.9
SFSWAP-207ENST00000538548 MCM7P33993 719 aa20.64■□□□□ 0.9
SFSWAP-207ENST00000538548 MDH1P40925 334 aaKnown RBP20.64■□□□□ 0.9
SFSWAP-207ENST00000538548 PAK2Q13177 524 aa20.64■□□□□ 0.9
SFSWAP-207ENST00000538548 GIMAP8Q8ND71 665 aaPredicted RBP20.64■□□□□ 0.9
SFSWAP-207ENST00000538548 ERGIC2Q96RQ1 377 aa20.64■□□□□ 0.9
SFSWAP-207ENST00000538548 DISC1Q9NRI5 854 aa20.64■□□□□ 0.9
SFSWAP-207ENST00000538548 SMARCAL1Q9NZC9 954 aa20.64■□□□□ 0.9
SFSWAP-207ENST00000538548 PLAGL2Q9UPG8 496 aa20.64■□□□□ 0.9
SFSWAP-207ENST00000538548 ANKRD18BA2A2Z9 1011 aa20.64■□□□□ 0.89
SFSWAP-207ENST00000538548 CXCR5P32302 372 aa20.64■□□□□ 0.89
SFSWAP-207ENST00000538548 LCORLQ8N3X6 602 aa20.64■□□□□ 0.89
SFSWAP-207ENST00000538548 ESR2Q92731 530 aa20.64■□□□□ 0.89
SFSWAP-207ENST00000538548 DHTKD1Q96HY7 919 aaPredicted RBP20.64■□□□□ 0.89
SFSWAP-207ENST00000538548 RHOBTB3O94955 611 aa20.63■□□□□ 0.89
SFSWAP-207ENST00000538548 PLEKHA8P1O95397 391 aa20.63■□□□□ 0.89
SFSWAP-207ENST00000538548 LCA5LO95447 670 aa20.63■□□□□ 0.89
SFSWAP-207ENST00000538548 ELF1P32519 619 aa20.63■□□□□ 0.89
SFSWAP-207ENST00000538548 WLSQ5T9L3 541 aa20.63■□□□□ 0.89
SFSWAP-207ENST00000538548 PIK3AP1Q6ZUJ8 805 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms