RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 MAP2K5Q13163 448 aa15.22■□□□□ 0.03
CHFR-216ENST00000538235 IRF5Q13568 498 aa15.22■□□□□ 0.03
CHFR-216ENST00000538235 KIF22Q14807 665 aa15.22■□□□□ 0.03
CHFR-216ENST00000538235 TMTC2Q8N394 836 aa15.22■□□□□ 0.03
CHFR-216ENST00000538235 CTCFLQ8NI51 663 aaPredicted RBP15.22■□□□□ 0.03
CHFR-216ENST00000538235 TRERF1Q96PN7 1200 aa15.22■□□□□ 0.03
CHFR-216ENST00000538235 ALDH8A1Q9H2A2 487 aaPredicted RBP15.22■□□□□ 0.03
CHFR-216ENST00000538235 MROH8Q9H579 483 aa15.22■□□□□ 0.03
CHFR-216ENST00000538235 MYH7BA7E2Y1 1941 aa15.21■□□□□ 0.03
CHFR-216ENST00000538235 ZBTB5O15062 677 aa15.21■□□□□ 0.03
CHFR-216ENST00000538235 CTDNEP1O95476 244 aa15.21■□□□□ 0.03
CHFR-216ENST00000538235 SLC25A27O95847 323 aa15.21■□□□□ 0.03
CHFR-216ENST00000538235 HOXC6P09630 235 aa15.21■□□□□ 0.03
CHFR-216ENST00000538235 METAP2P50579 478 aaKnown RBP eCLIP15.21■□□□□ 0.03
CHFR-216ENST00000538235 NEK4P51957 841 aa15.21■□□□□ 0.03
CHFR-216ENST00000538235 SCRN1Q12765 414 aa15.21■□□□□ 0.03
CHFR-216ENST00000538235 STK3Q13188 491 aa15.21■□□□□ 0.03
CHFR-216ENST00000538235 ME3Q16798 604 aa15.21■□□□□ 0.03
CHFR-216ENST00000538235 ZNF792Q3KQV3 632 aa15.21■□□□□ 0.03
CHFR-216ENST00000538235 GPKOWQ92917 476 aaPredicted RBP eCLIP15.21■□□□□ 0.03
CHFR-216ENST00000538235 COA7Q96BR5 231 aa15.21■□□□□ 0.03
CHFR-216ENST00000538235 MMP19Q99542 508 aa15.21■□□□□ 0.03
CHFR-216ENST00000538235 APBA2Q99767 749 aa15.21■□□□□ 0.03
CHFR-216ENST00000538235 KIAA0100Q14667 2235 aaKnown RBP15.2■□□□□ 0.02
CHFR-216ENST00000538235 ALPK3Q96L96 1907 aa15.2■□□□□ 0.02
CHFR-216ENST00000538235 SOWAHBA6NEL2 793 aa15.2■□□□□ 0.02
CHFR-216ENST00000538235 DHX16O60231 1041 aaKnown RBP15.2■□□□□ 0.02
CHFR-216ENST00000538235 ADCY3O60266 1144 aa15.2■□□□□ 0.02
CHFR-216ENST00000538235 GNRH1P01148 92 aa15.2■□□□□ 0.02
CHFR-216ENST00000538235 FDX1P10109 184 aa15.2■□□□□ 0.02
CHFR-216ENST00000538235 RCAN1P53805 252 aa15.2■□□□□ 0.02
CHFR-216ENST00000538235 MTFR1Q15390 333 aa15.2■□□□□ 0.02
CHFR-216ENST00000538235 PKN1Q16512 942 aa15.2■□□□□ 0.02
CHFR-216ENST00000538235 NECAB1Q8N987 351 aa15.2■□□□□ 0.02
CHFR-216ENST00000538235 FAM133AQ8N9E0 248 aa15.2■□□□□ 0.02
CHFR-216ENST00000538235 TRPV1Q8NER1 839 aa15.2■□□□□ 0.02
CHFR-216ENST00000538235 SOCS4Q8WXH5 440 aa15.2■□□□□ 0.02
CHFR-216ENST00000538235 PHKBQ93100 1093 aa15.2■□□□□ 0.02
CHFR-216ENST00000538235 NUDT12Q9BQG2 462 aa15.2■□□□□ 0.02
CHFR-216ENST00000538235 ACAD9Q9H845 621 aa15.2■□□□□ 0.02
CHFR-216ENST00000538235 CYP39A1Q9NYL5 469 aa15.2■□□□□ 0.02
CHFR-216ENST00000538235 NAP1L2Q9ULW6 460 aaPredicted RBP15.2■□□□□ 0.02
CHFR-216ENST00000538235 CALM1P0DP23 149 aa15.19■□□□□ 0.02
CHFR-216ENST00000538235 CALM2P0DP24 149 aa15.19■□□□□ 0.02
CHFR-216ENST00000538235 CALM3P0DP25 149 aa15.19■□□□□ 0.02
CHFR-216ENST00000538235 KIF5BP33176 963 aa15.19■□□□□ 0.02
CHFR-216ENST00000538235 FGD1P98174 961 aa15.19■□□□□ 0.02
CHFR-216ENST00000538235 WWC2Q6AWC2 1192 aa15.19■□□□□ 0.02
CHFR-216ENST00000538235 FBXO11Q86XK2 927 aa15.19■□□□□ 0.02
CHFR-216ENST00000538235 ABRAQ8N0Z2 381 aa15.19■□□□□ 0.02
CHFR-216ENST00000538235 CHST13Q8NET6 341 aa15.19■□□□□ 0.02
CHFR-216ENST00000538235 ARMC5Q96C12 935 aa15.19■□□□□ 0.02
CHFR-216ENST00000538235 ABHD8Q96I13 439 aa15.19■□□□□ 0.02
CHFR-216ENST00000538235 MAML3Q96JK9 1138 aa15.19■□□□□ 0.02
CHFR-216ENST00000538235 ZNF333Q96JL9 665 aa15.19■□□□□ 0.02
CHFR-216ENST00000538235 MYCP01106 439 aaPredicted RBP15.18■□□□□ 0.02
CHFR-216ENST00000538235 INHAP05111 366 aa15.18■□□□□ 0.02
CHFR-216ENST00000538235 FCER1AP12319 257 aa15.18■□□□□ 0.02
CHFR-216ENST00000538235 GRK4P32298 578 aa15.18■□□□□ 0.02
CHFR-216ENST00000538235 CYP2C19P33261 490 aa15.18■□□□□ 0.02
CHFR-216ENST00000538235 RGS2P41220 211 aa15.18■□□□□ 0.02
CHFR-216ENST00000538235 BAATQ14032 418 aaPredicted RBP15.18■□□□□ 0.02
CHFR-216ENST00000538235 MAP3K21Q5TCX8 1036 aa15.18■□□□□ 0.02
CHFR-216ENST00000538235 NSMFQ6X4W1 530 aa15.18■□□□□ 0.02
CHFR-216ENST00000538235 TNS4Q8IZW8 715 aa15.18■□□□□ 0.02
CHFR-216ENST00000538235 RAET1EQ8TD07 263 aa15.18■□□□□ 0.02
CHFR-216ENST00000538235 AIFM3Q96NN9 605 aa15.18■□□□□ 0.02
CHFR-216ENST00000538235 PNMA6FA0A0J9YX94 578 aa15.17■□□□□ 0.02
CHFR-216ENST00000538235 PFKFB2O60825 505 aa15.17■□□□□ 0.02
CHFR-216ENST00000538235 PTGS1P23219 599 aa15.17■□□□□ 0.02
CHFR-216ENST00000538235 SMARCA1P28370 1054 aa15.17■□□□□ 0.02
CHFR-216ENST00000538235 PRMT2P55345 433 aa15.17■□□□□ 0.02
CHFR-216ENST00000538235 RPS6P62753 249 aaKnown RBP15.17■□□□□ 0.02
CHFR-216ENST00000538235 GHRHRQ02643 423 aa15.17■□□□□ 0.02
CHFR-216ENST00000538235 TKFCQ3LXA3 575 aa15.17■□□□□ 0.02
CHFR-216ENST00000538235 ZNF274Q96GC6 653 aaPredicted RBP15.17■□□□□ 0.02
CHFR-216ENST00000538235 AMNQ9BXJ7 453 aa15.17■□□□□ 0.02
CHFR-216ENST00000538235 KATNBL1Q9H079 304 aa15.17■□□□□ 0.02
CHFR-216ENST00000538235 UNC93B1Q9H1C4 597 aa15.17■□□□□ 0.02
CHFR-216ENST00000538235 RBM28Q9NW13 759 aaKnown RBP15.17■□□□□ 0.02
CHFR-216ENST00000538235 CTDP1Q9Y5B0 961 aaPredicted RBP15.17■□□□□ 0.02
CHFR-216ENST00000538235 IVNS1ABPQ9Y6Y0 642 aa15.17■□□□□ 0.02
CHFR-216ENST00000538235 ABCB11O95342 1321 aa15.17■□□□□ 0.02
CHFR-216ENST00000538235 STXBP3O00186 592 aa15.16■□□□□ 0.02
CHFR-216ENST00000538235 ADCY6O43306 1168 aa15.16■□□□□ 0.02
CHFR-216ENST00000538235 STRNO43815 780 aa15.16■□□□□ 0.02
CHFR-216ENST00000538235 XRCC5P13010 732 aaKnown RBP15.16■□□□□ 0.02
CHFR-216ENST00000538235 CCND3P30281 292 aaPredicted RBP15.16■□□□□ 0.02
CHFR-216ENST00000538235 COPB2P35606 906 aa15.16■□□□□ 0.02
CHFR-216ENST00000538235 CACNB2Q08289 660 aaPredicted RBP15.16■□□□□ 0.02
CHFR-216ENST00000538235 KCTD2Q14681 263 aa15.16■□□□□ 0.02
CHFR-216ENST00000538235 PKN2Q16513 984 aaKnown RBP15.16■□□□□ 0.02
CHFR-216ENST00000538235 PRAMEF19Q5SWL8 479 aa15.16■□□□□ 0.02
CHFR-216ENST00000538235 CCAR1Q8IX12 1150 aaKnown RBP15.16■□□□□ 0.02
CHFR-216ENST00000538235 PXYLP1Q8TE99 480 aa15.16■□□□□ 0.02
CHFR-216ENST00000538235 GTF3C6Q969F1 213 aa15.16■□□□□ 0.02
CHFR-216ENST00000538235 PCDHA1Q9Y5I3 950 aa15.16■□□□□ 0.02
CHFR-216ENST00000538235 V9GY48 417 aaPredicted RBP15.16■□□□□ 0.02
CHFR-216ENST00000538235 JAK2O60674 1132 aa15.15■□□□□ 0.02
CHFR-216ENST00000538235 SNAI1O95863 264 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms