RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 MRE11P49959 708 aa13.37□□□□□ -0.27
CLPB-208ENST00000538021 EEPD1Q7L9B9 569 aa13.37□□□□□ -0.27
CLPB-208ENST00000538021 ERC1Q8IUD2 1116 aa13.37□□□□□ -0.27
CLPB-208ENST00000538021 STK11IPQ8N1F8 1099 aa13.37□□□□□ -0.27
CLPB-208ENST00000538021 ALDH8A1Q9H2A2 487 aaPredicted RBP13.37□□□□□ -0.27
CLPB-208ENST00000538021 SLC38A10Q9HBR0 1119 aa13.37□□□□□ -0.27
CLPB-208ENST00000538021 ZNF316A6NFI3 1004 aaPredicted RBP13.36□□□□□ -0.27
CLPB-208ENST00000538021 ASB14A6NK59 587 aa13.36□□□□□ -0.27
CLPB-208ENST00000538021 SUPT20HL2P0C7V6 817 aa13.36□□□□□ -0.27
CLPB-208ENST00000538021 CSPP1Q1MSJ5 1256 aa13.36□□□□□ -0.27
CLPB-208ENST00000538021 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.36□□□□□ -0.27
CLPB-208ENST00000538021 HERC6Q8IVU3 1022 aa13.36□□□□□ -0.27
CLPB-208ENST00000538021 GJD3Q8N144 294 aa13.36□□□□□ -0.27
CLPB-208ENST00000538021 FAM133AQ8N9E0 248 aa13.36□□□□□ -0.27
CLPB-208ENST00000538021 PHOSPHO2Q8TCD6 241 aa13.36□□□□□ -0.27
CLPB-208ENST00000538021 FTOQ9C0B1 505 aaKnown RBP eCLIP13.36□□□□□ -0.27
CLPB-208ENST00000538021 PDGFCQ9NRA1 345 aa13.36□□□□□ -0.27
CLPB-208ENST00000538021 CLIP2Q9UDT6 1046 aa13.36□□□□□ -0.27
CLPB-208ENST00000538021 COG6Q9Y2V7 657 aa13.36□□□□□ -0.27
CLPB-208ENST00000538021 SLC4A4Q9Y6R1 1079 aa13.36□□□□□ -0.27
CLPB-208ENST00000538021 DDX49Q9Y6V7 483 aaKnown RBP13.36□□□□□ -0.27
CLPB-208ENST00000538021 TNKSO95271 1327 aa13.36□□□□□ -0.27
CLPB-208ENST00000538021 SOWAHBA6NEL2 793 aa13.35□□□□□ -0.27
CLPB-208ENST00000538021 LPXNO60711 386 aa13.35□□□□□ -0.27
CLPB-208ENST00000538021 SSTR3P32745 418 aaPredicted RBP13.35□□□□□ -0.27
CLPB-208ENST00000538021 ADD2P35612 726 aa13.35□□□□□ -0.27
CLPB-208ENST00000538021 TMEM63BQ5T3F8 832 aa13.35□□□□□ -0.27
CLPB-208ENST00000538021 ZKSCAN2Q63HK3 967 aa13.35□□□□□ -0.27
CLPB-208ENST00000538021 CTR9Q6PD62 1173 aa13.35□□□□□ -0.27
CLPB-208ENST00000538021 SPRED2Q7Z698 418 aa13.35□□□□□ -0.27
CLPB-208ENST00000538021 FBXO16Q8IX29 292 aaPredicted RBP13.35□□□□□ -0.27
CLPB-208ENST00000538021 ACAD9Q9H845 621 aa13.35□□□□□ -0.27
CLPB-208ENST00000538021 MKNK2Q9HBH9 465 aa13.35□□□□□ -0.27
CLPB-208ENST00000538021 NYAP2Q9P242 653 aa13.35□□□□□ -0.27
CLPB-208ENST00000538021 FEM1BQ9UK73 627 aa13.35□□□□□ -0.27
CLPB-208ENST00000538021 ISY1Q9ULR0 285 aaKnown RBP13.35□□□□□ -0.27
CLPB-208ENST00000538021 SCN5AQ14524 2016 aa13.35□□□□□ -0.27
CLPB-208ENST00000538021 OAZ1P54368 228 aa13.34□□□□□ -0.27
CLPB-208ENST00000538021 FAM47CQ5HY64 1035 aa13.34□□□□□ -0.27
CLPB-208ENST00000538021 IQSEC1Q6DN90 963 aa13.34□□□□□ -0.27
CLPB-208ENST00000538021 KIAA1211Q6ZU35 1233 aa13.34□□□□□ -0.27
CLPB-208ENST00000538021 ITPRIPQ8IWB1 547 aa13.34□□□□□ -0.27
CLPB-208ENST00000538021 RETREG2Q8NC44 543 aa13.34□□□□□ -0.27
CLPB-208ENST00000538021 GDPD5Q8WTR4 605 aa13.34□□□□□ -0.27
CLPB-208ENST00000538021 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.34□□□□□ -0.27
CLPB-208ENST00000538021 SNX27Q96L92 541 aa13.34□□□□□ -0.27
CLPB-208ENST00000538021 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.34□□□□□ -0.27
CLPB-208ENST00000538021 A1CFQ9NQ94 594 aaKnown RBP13.34□□□□□ -0.27
CLPB-208ENST00000538021 CHGBP05060 677 aa13.33□□□□□ -0.28
CLPB-208ENST00000538021 MYL3P08590 195 aa13.33□□□□□ -0.28
CLPB-208ENST00000538021 IFIT2P09913 472 aaKnown RBP13.33□□□□□ -0.28
CLPB-208ENST00000538021 RFC2P35250 354 aa13.33□□□□□ -0.28
CLPB-208ENST00000538021 KCNJ6P48051 423 aa13.33□□□□□ -0.28
CLPB-208ENST00000538021 TAPT1Q6NXT6 567 aa13.33□□□□□ -0.28
CLPB-208ENST00000538021 FTSJ3Q8IY81 847 aaKnown RBP13.33□□□□□ -0.28
CLPB-208ENST00000538021 LRRC47Q8N1G4 583 aaKnown RBP13.33□□□□□ -0.28
CLPB-208ENST00000538021 CLASRPQ8N2M8 674 aaKnown RBP13.33□□□□□ -0.28
CLPB-208ENST00000538021 UBE2ZQ9H832 354 aaPredicted RBP13.33□□□□□ -0.28
CLPB-208ENST00000538021 RNF146Q9NTX7 359 aa13.33□□□□□ -0.28
CLPB-208ENST00000538021 PAG1Q9NWQ8 432 aa13.33□□□□□ -0.28
CLPB-208ENST00000538021 MTUS1Q9ULD2 1270 aa13.33□□□□□ -0.28
CLPB-208ENST00000538021 Q9Y3F1 56 aa13.33□□□□□ -0.28
CLPB-208ENST00000538021 LCHNA4D1U4 455 aa13.32□□□□□ -0.28
CLPB-208ENST00000538021 IQCF3P0C7M6 154 aa13.32□□□□□ -0.28
CLPB-208ENST00000538021 ALADP13716 330 aa13.32□□□□□ -0.28
CLPB-208ENST00000538021 RASA1P20936 1047 aa13.32□□□□□ -0.28
CLPB-208ENST00000538021 KCNA5P22460 613 aa13.32□□□□□ -0.28
CLPB-208ENST00000538021 NHLH1Q02575 133 aa13.32□□□□□ -0.28
CLPB-208ENST00000538021 CEP85Q6P2H3 762 aa13.32□□□□□ -0.28
CLPB-208ENST00000538021 FAM178BQ8IXR5 827 aa13.32□□□□□ -0.28
CLPB-208ENST00000538021 RHPN1Q8TCX5 695 aa13.32□□□□□ -0.28
CLPB-208ENST00000538021 PPP1R13LQ8WUF5 828 aa13.32□□□□□ -0.28
CLPB-208ENST00000538021 CHMP4CQ96CF2 233 aa13.32□□□□□ -0.28
CLPB-208ENST00000538021 TRERF1Q96PN7 1200 aa13.32□□□□□ -0.28
CLPB-208ENST00000538021 ZBED2Q9BTP6 218 aa13.32□□□□□ -0.28
CLPB-208ENST00000538021 BOLA2Q9H3K6 86 aa13.32□□□□□ -0.28
CLPB-208ENST00000538021 GPHNQ9NQX3 736 aaPredicted RBP13.32□□□□□ -0.28
CLPB-208ENST00000538021 POLR3EQ9NVU0 708 aa13.32□□□□□ -0.28
CLPB-208ENST00000538021 ARPP21Q9UBL0 812 aaPredicted RBP13.32□□□□□ -0.28
CLPB-208ENST00000538021 ZBED9Q6R2W3 1325 aa13.32□□□□□ -0.28
CLPB-208ENST00000538021 COL4A4P53420 1690 aaPredicted RBP13.31□□□□□ -0.28
CLPB-208ENST00000538021 MINDY4BA8MYZ0 360 aa13.31□□□□□ -0.28
CLPB-208ENST00000538021 BMP3P12645 472 aa13.31□□□□□ -0.28
CLPB-208ENST00000538021 ALAS1P13196 640 aa13.31□□□□□ -0.28
CLPB-208ENST00000538021 IL9P15248 144 aa13.31□□□□□ -0.28
CLPB-208ENST00000538021 IKQ13123 557 aaPredicted RBP13.31□□□□□ -0.28
CLPB-208ENST00000538021 SLFN13Q68D06 897 aa13.31□□□□□ -0.28
CLPB-208ENST00000538021 TMCO2Q7Z6W1 182 aaPredicted RBP13.31□□□□□ -0.28
CLPB-208ENST00000538021 MTG1Q9BT17 334 aaPredicted RBP13.31□□□□□ -0.28
CLPB-208ENST00000538021 LMCD1Q9NZU5 365 aa13.31□□□□□ -0.28
CLPB-208ENST00000538021 BRWD1Q9NSI6 2320 aa13.31□□□□□ -0.28
CLPB-208ENST00000538021 ZNF536O15090 1300 aa13.31□□□□□ -0.28
CLPB-208ENST00000538021 GREB1LQ9C091 1923 aaPredicted RBP13.31□□□□□ -0.28
CLPB-208ENST00000538021 TMEM232C9JQI7 657 aa13.3□□□□□ -0.28
CLPB-208ENST00000538021 BAIAP3O94812 1187 aa13.3□□□□□ -0.28
CLPB-208ENST00000538021 FDX1P10109 184 aa13.3□□□□□ -0.28
CLPB-208ENST00000538021 CPT1AP50416 773 aa13.3□□□□□ -0.28
CLPB-208ENST00000538021 PURAQ00577 322 aaKnown RBP13.3□□□□□ -0.28
CLPB-208ENST00000538021 UBE3CQ15386 1083 aa13.3□□□□□ -0.28
CLPB-208ENST00000538021 NBPF20Q3BBV1 942 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms