RNA–Protein interactions for RNA: ENST00000536723.5

USP30-209, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 5

Gene USP30, Length 826 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-209ENST00000536723 HERC6Q8IVU3 1022 aa22.43■■□□□ 1.18
USP30-209ENST00000536723 PDGFCQ9NRA1 345 aa22.43■■□□□ 1.18
USP30-209ENST00000536723 ACTN1P12814 892 aa22.42■■□□□ 1.18
USP30-209ENST00000536723 SNX27Q96L92 541 aa22.42■■□□□ 1.18
USP30-209ENST00000536723 IL1RAPL2Q9NP60 686 aa22.42■■□□□ 1.18
USP30-209ENST00000536723 HOMER2Q9NSB8 354 aa22.42■■□□□ 1.18
USP30-209ENST00000536723 EXOC6BQ9Y2D4 811 aa22.42■■□□□ 1.18
USP30-209ENST00000536723 DDX49Q9Y6V7 483 aaKnown RBP22.42■■□□□ 1.18
USP30-209ENST00000536723 SUPT20HL2P0C7V6 817 aa22.41■■□□□ 1.18
USP30-209ENST00000536723 CTR9Q6PD62 1173 aa22.41■■□□□ 1.18
USP30-209ENST00000536723 GJD3Q8N144 294 aa22.41■■□□□ 1.18
USP30-209ENST00000536723 NYAP2Q9P242 653 aa22.41■■□□□ 1.18
USP30-209ENST00000536723 TNKSO95271 1327 aa22.4■■□□□ 1.18
USP30-209ENST00000536723 ASB14A6NK59 587 aa22.4■■□□□ 1.18
USP30-209ENST00000536723 KIF28PB7ZC32 967 aa22.4■■□□□ 1.18
USP30-209ENST00000536723 ADD2P35612 726 aa22.4■■□□□ 1.18
USP30-209ENST00000536723 OAZ1P54368 228 aa22.4■■□□□ 1.18
USP30-209ENST00000536723 IQSEC1Q6DN90 963 aa22.4■■□□□ 1.18
USP30-209ENST00000536723 TAPT1Q6NXT6 567 aa22.4■■□□□ 1.18
USP30-209ENST00000536723 ERC1Q8IUD2 1116 aa22.4■■□□□ 1.18
USP30-209ENST00000536723 UIMC1Q96RL1 719 aa22.4■■□□□ 1.18
USP30-209ENST00000536723 A1CFQ9NQ94 594 aaKnown RBP22.4■■□□□ 1.18
USP30-209ENST00000536723 Q9Y3F1 56 aa22.4■■□□□ 1.18
USP30-209ENST00000536723 CHGBP05060 677 aa22.39■■□□□ 1.17
USP30-209ENST00000536723 NHLH1Q02575 133 aa22.39■■□□□ 1.17
USP30-209ENST00000536723 EEPD1Q7L9B9 569 aa22.39■■□□□ 1.17
USP30-209ENST00000536723 FAM178BQ8IXR5 827 aa22.39■■□□□ 1.17
USP30-209ENST00000536723 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.39■■□□□ 1.17
USP30-209ENST00000536723 DDRGK1Q96HY6 314 aa22.39■■□□□ 1.17
USP30-209ENST00000536723 ACAD9Q9H845 621 aa22.39■■□□□ 1.17
USP30-209ENST00000536723 CLIP2Q9UDT6 1046 aa22.39■■□□□ 1.17
USP30-209ENST00000536723 FEM1BQ9UK73 627 aa22.39■■□□□ 1.17
USP30-209ENST00000536723 ZBED9Q6R2W3 1325 aa22.38■■□□□ 1.17
USP30-209ENST00000536723 BAZ2AQ9UIF9 1905 aaKnown RBP22.38■■□□□ 1.17
USP30-209ENST00000536723 RASA1P20936 1047 aa22.38■■□□□ 1.17
USP30-209ENST00000536723 RFC2P35250 354 aa22.38■■□□□ 1.17
USP30-209ENST00000536723 LMCD1Q9NZU5 365 aa22.38■■□□□ 1.17
USP30-209ENST00000536723 SLC4A4Q9Y6R1 1079 aa22.38■■□□□ 1.17
USP30-209ENST00000536723 IQCF3P0C7M6 154 aa22.37■■□□□ 1.17
USP30-209ENST00000536723 FBXO16Q8IX29 292 aaPredicted RBP22.37■■□□□ 1.17
USP30-209ENST00000536723 STK11IPQ8N1F8 1099 aa22.37■■□□□ 1.17
USP30-209ENST00000536723 FTOQ9C0B1 505 aaKnown RBP eCLIP22.37■■□□□ 1.17
USP30-209ENST00000536723 UBE2ZQ9H832 354 aaPredicted RBP22.37■■□□□ 1.17
USP30-209ENST00000536723 COG6Q9Y2V7 657 aa22.37■■□□□ 1.17
USP30-209ENST00000536723 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.36■■□□□ 1.17
USP30-209ENST00000536723 LCHNA4D1U4 455 aa22.36■■□□□ 1.17
USP30-209ENST00000536723 ZKSCAN2Q63HK3 967 aa22.36■■□□□ 1.17
USP30-209ENST00000536723 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.36■■□□□ 1.17
USP30-209ENST00000536723 RHPN1Q8TCX5 695 aa22.36■■□□□ 1.17
USP30-209ENST00000536723 GDPD5Q8WTR4 605 aa22.36■■□□□ 1.17
USP30-209ENST00000536723 ALADP13716 330 aa22.35■■□□□ 1.17
USP30-209ENST00000536723 SSTR3P32745 418 aaPredicted RBP22.35■■□□□ 1.17
USP30-209ENST00000536723 LEXMQ3ZCV2 418 aa22.35■■□□□ 1.17
USP30-209ENST00000536723 CEP85Q6P2H3 762 aa22.35■■□□□ 1.17
USP30-209ENST00000536723 FBXL18Q96ME1 805 aa22.35■■□□□ 1.17
USP30-209ENST00000536723 RNF146Q9NTX7 359 aa22.35■■□□□ 1.17
USP30-209ENST00000536723 PAG1Q9NWQ8 432 aa22.35■■□□□ 1.17
USP30-209ENST00000536723 IL9P15248 144 aa22.34■■□□□ 1.17
USP30-209ENST00000536723 PURAQ00577 322 aaKnown RBP22.34■■□□□ 1.17
USP30-209ENST00000536723 CSPP1Q1MSJ5 1256 aa22.34■■□□□ 1.17
USP30-209ENST00000536723 KIAA1211Q6ZU35 1233 aa22.34■■□□□ 1.17
USP30-209ENST00000536723 RETREG2Q8NC44 543 aa22.34■■□□□ 1.17
USP30-209ENST00000536723 PPP1R13LQ8WUF5 828 aa22.34■■□□□ 1.17
USP30-209ENST00000536723 MKL1Q969V6 931 aa22.34■■□□□ 1.17
USP30-209ENST00000536723 MKNK2Q9HBH9 465 aa22.34■■□□□ 1.17
USP30-209ENST00000536723 POLR3EQ9NVU0 708 aa22.34■■□□□ 1.17
USP30-209ENST00000536723 ARPP21Q9UBL0 812 aaPredicted RBP22.34■■□□□ 1.17
USP30-209ENST00000536723 SCN5AQ14524 2016 aa22.34■■□□□ 1.17
USP30-209ENST00000536723 ZNF536O15090 1300 aa22.33■■□□□ 1.17
USP30-209ENST00000536723 BRWD1Q9NSI6 2320 aa22.33■■□□□ 1.17
USP30-209ENST00000536723 IGKV6D-41A0A0C4DH26 115 aa22.33■■□□□ 1.17
USP30-209ENST00000536723 ZNF316A6NFI3 1004 aaPredicted RBP22.33■■□□□ 1.17
USP30-209ENST00000536723 KCNA5P22460 613 aa22.33■■□□□ 1.17
USP30-209ENST00000536723 FAM47CQ5HY64 1035 aa22.33■■□□□ 1.17
USP30-209ENST00000536723 TMCO2Q7Z6W1 182 aaPredicted RBP22.33■■□□□ 1.17
USP30-209ENST00000536723 SUGCTQ9HAC7 445 aa22.33■■□□□ 1.17
USP30-209ENST00000536723 GREB1LQ9C091 1923 aaPredicted RBP22.33■■□□□ 1.16
USP30-209ENST00000536723 PITPNM1O00562 1244 aa22.32■■□□□ 1.16
USP30-209ENST00000536723 MYL3P08590 195 aa22.32■■□□□ 1.16
USP30-209ENST00000536723 UBE3CQ15386 1083 aa22.32■■□□□ 1.16
USP30-209ENST00000536723 DUSP28Q4G0W2 176 aa22.32■■□□□ 1.16
USP30-209ENST00000536723 TRERF1Q96PN7 1200 aa22.32■■□□□ 1.16
USP30-209ENST00000536723 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.32■■□□□ 1.16
USP30-209ENST00000536723 BOLA2Q9H3K6 86 aa22.32■■□□□ 1.16
USP30-209ENST00000536723 MTUS1Q9ULD2 1270 aa22.32■■□□□ 1.16
USP30-209ENST00000536723 BAIAP3O94812 1187 aa22.31■■□□□ 1.16
USP30-209ENST00000536723 FDX1P10109 184 aa22.31■■□□□ 1.16
USP30-209ENST00000536723 BMP3P12645 472 aa22.31■■□□□ 1.16
USP30-209ENST00000536723 NBPF20Q3BBV1 942 aa22.31■■□□□ 1.16
USP30-209ENST00000536723 ITPRIPQ8IWB1 547 aa22.31■■□□□ 1.16
USP30-209ENST00000536723 LRRC47Q8N1G4 583 aaKnown RBP22.31■■□□□ 1.16
USP30-209ENST00000536723 CLASRPQ8N2M8 674 aaKnown RBP22.31■■□□□ 1.16
USP30-209ENST00000536723 PURBQ96QR8 312 aaKnown RBP22.31■■□□□ 1.16
USP30-209ENST00000536723 MTG1Q9BT17 334 aaPredicted RBP22.31■■□□□ 1.16
USP30-209ENST00000536723 PUS7LQ9H0K6 701 aaKnown RBP22.31■■□□□ 1.16
USP30-209ENST00000536723 VTA1Q9NP79 307 aa22.31■■□□□ 1.16
USP30-209ENST00000536723 TMEM232C9JQI7 657 aa22.3■■□□□ 1.16
USP30-209ENST00000536723 IFIT2P09913 472 aaKnown RBP22.3■■□□□ 1.16
USP30-209ENST00000536723 ALAS1P13196 640 aa22.3■■□□□ 1.16
USP30-209ENST00000536723 KCNJ6P48051 423 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms