RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 PARP10Q53GL7 1025 aa8.75□□□□□ -1.01
CPSF7-216ENST00000536548 TTLL5Q6EMB2 1281 aa8.75□□□□□ -1.01
CPSF7-216ENST00000536548 IQCEQ6IPM2 695 aa8.75□□□□□ -1.01
CPSF7-216ENST00000536548 CCDC70Q6NSX1 233 aa8.75□□□□□ -1.01
CPSF7-216ENST00000536548 IGSF22Q8N9C0 903 aa8.75□□□□□ -1.01
CPSF7-216ENST00000536548 OSBP2Q969R2 916 aa8.75□□□□□ -1.01
CPSF7-216ENST00000536548 EYA3Q99504 573 aa8.75□□□□□ -1.01
CPSF7-216ENST00000536548 PYM1Q9BRP8 204 aaKnown RBP8.75□□□□□ -1.01
CPSF7-216ENST00000536548 DESI2Q9BSY9 194 aa8.75□□□□□ -1.01
CPSF7-216ENST00000536548 ZC3H12CQ9C0D7 883 aaKnown RBP8.75□□□□□ -1.01
CPSF7-216ENST00000536548 DEF6Q9H4E7 631 aa8.75□□□□□ -1.01
CPSF7-216ENST00000536548 CWC25Q9NXE8 425 aaPredicted RBP8.75□□□□□ -1.01
CPSF7-216ENST00000536548 PUF60Q9UHX1 559 aaKnown RBP8.75□□□□□ -1.01
CPSF7-216ENST00000536548 FAN1Q9Y2M0 1017 aa8.75□□□□□ -1.01
CPSF7-216ENST00000536548 SYNRGQ9UMZ2 1314 aa8.75□□□□□ -1.01
CPSF7-216ENST00000536548 A0A087WUV0 522 aaPredicted RBP8.74□□□□□ -1.01
CPSF7-216ENST00000536548 TARSL2A2RTX5 802 aaKnown RBP8.74□□□□□ -1.01
CPSF7-216ENST00000536548 A6NNZ2 444 aa8.74□□□□□ -1.01
CPSF7-216ENST00000536548 EIF3CLB5ME19 914 aaKnown RBP8.74□□□□□ -1.01
CPSF7-216ENST00000536548 G3V3G9 751 aa8.74□□□□□ -1.01
CPSF7-216ENST00000536548 TRIM66O15016 1216 aa8.74□□□□□ -1.01
CPSF7-216ENST00000536548 BMP15O95972 392 aa8.74□□□□□ -1.01
CPSF7-216ENST00000536548 FGAP02671 866 aa8.74□□□□□ -1.01
CPSF7-216ENST00000536548 GJA8P48165 433 aa8.74□□□□□ -1.01
CPSF7-216ENST00000536548 HAND2P61296 217 aa8.74□□□□□ -1.01
CPSF7-216ENST00000536548 TTF1Q15361 905 aaPredicted RBP8.74□□□□□ -1.01
CPSF7-216ENST00000536548 TUBB8Q3ZCM7 444 aa8.74□□□□□ -1.01
CPSF7-216ENST00000536548 DNAJC21Q5F1R6 531 aaKnown RBP8.74□□□□□ -1.01
CPSF7-216ENST00000536548 DCAF8Q5TAQ9 597 aa8.74□□□□□ -1.01
CPSF7-216ENST00000536548 CYP26C1Q6V0L0 522 aa8.74□□□□□ -1.01
CPSF7-216ENST00000536548 NFXL1Q6ZNB6 911 aa8.74□□□□□ -1.01
CPSF7-216ENST00000536548 NOSTRINQ8IVI9 506 aa8.74□□□□□ -1.01
CPSF7-216ENST00000536548 SUGP1Q8IWZ8 645 aaKnown RBP8.74□□□□□ -1.01
CPSF7-216ENST00000536548 TRIM22Q8IYM9 498 aa8.74□□□□□ -1.01
CPSF7-216ENST00000536548 SLC35F6Q8N357 371 aa8.74□□□□□ -1.01
CPSF7-216ENST00000536548 EHBP1Q8NDI1 1231 aa8.74□□□□□ -1.01
CPSF7-216ENST00000536548 RUBCNQ92622 972 aa8.74□□□□□ -1.01
CPSF7-216ENST00000536548 FAM161BQ96MY7 647 aa8.74□□□□□ -1.01
CPSF7-216ENST00000536548 GUCD1Q96NT3 240 aa8.74□□□□□ -1.01
CPSF7-216ENST00000536548 EIF3CQ99613 913 aaKnown RBP8.74□□□□□ -1.01
CPSF7-216ENST00000536548 GDF15Q99988 308 aa8.74□□□□□ -1.01
CPSF7-216ENST00000536548 FOXP1Q9H334 677 aaPredicted RBP8.74□□□□□ -1.01
CPSF7-216ENST00000536548 LZTFL1Q9NQ48 299 aa8.74□□□□□ -1.01
CPSF7-216ENST00000536548 GEMIN8Q9NWZ8 242 aaKnown RBP8.74□□□□□ -1.01
CPSF7-216ENST00000536548 LCMT1Q9UIC8 334 aa8.74□□□□□ -1.01
CPSF7-216ENST00000536548 FBXO2Q9UK22 296 aaPredicted RBP8.74□□□□□ -1.01
CPSF7-216ENST00000536548 RPTORQ8N122 1335 aa8.74□□□□□ -1.01
CPSF7-216ENST00000536548 NID2Q14112 1375 aa8.73□□□□□ -1.01
CPSF7-216ENST00000536548 XIRP2A4UGR9 3374 aa8.73□□□□□ -1.01
CPSF7-216ENST00000536548 SOWAHDA6NJG2 315 aa8.73□□□□□ -1.01
CPSF7-216ENST00000536548 PPFIA3O75145 1194 aa8.73□□□□□ -1.01
CPSF7-216ENST00000536548 FARP2O94887 1054 aaPredicted RBP8.73□□□□□ -1.01
CPSF7-216ENST00000536548 FMNL1O95466 1100 aaPredicted RBP8.73□□□□□ -1.01
CPSF7-216ENST00000536548 CHGBP05060 677 aa8.73□□□□□ -1.01
CPSF7-216ENST00000536548 CCL5P13501 91 aa8.73□□□□□ -1.01
CPSF7-216ENST00000536548 GUCY2CP25092 1073 aa8.73□□□□□ -1.01
CPSF7-216ENST00000536548 PBX1P40424 430 aa8.73□□□□□ -1.01
CPSF7-216ENST00000536548 RCAN1P53805 252 aa8.73□□□□□ -1.01
CPSF7-216ENST00000536548 GYS2P54840 703 aa8.73□□□□□ -1.01
CPSF7-216ENST00000536548 TIMM10P62072 90 aa8.73□□□□□ -1.01
CPSF7-216ENST00000536548 RBL2Q08999 1139 aa8.73□□□□□ -1.01
CPSF7-216ENST00000536548 LRIT3Q3SXY7 679 aa8.73□□□□□ -1.01
CPSF7-216ENST00000536548 APOA5Q6Q788 366 aa8.73□□□□□ -1.01
CPSF7-216ENST00000536548 RAD9BQ6WBX8 426 aa8.73□□□□□ -1.01
CPSF7-216ENST00000536548 TMC4Q7Z404 712 aa8.73□□□□□ -1.01
CPSF7-216ENST00000536548 LRP10Q7Z4F1 713 aa8.73□□□□□ -1.01
CPSF7-216ENST00000536548 SGMS1Q86VZ5 419 aa8.73□□□□□ -1.01
CPSF7-216ENST00000536548 FOXP4Q8IVH2 680 aaPredicted RBP8.73□□□□□ -1.01
CPSF7-216ENST00000536548 SPATA20Q8TB22 786 aa8.73□□□□□ -1.01
CPSF7-216ENST00000536548 FAM122AQ96E09 287 aa8.73□□□□□ -1.01
CPSF7-216ENST00000536548 CLIC6Q96NY7 704 aa8.73□□□□□ -1.01
CPSF7-216ENST00000536548 PNKPQ96T60 521 aa8.73□□□□□ -1.01
CPSF7-216ENST00000536548 MTA3Q9BTC8 594 aa8.73□□□□□ -1.01
CPSF7-216ENST00000536548 ZSWIM4Q9H7M6 989 aa8.73□□□□□ -1.01
CPSF7-216ENST00000536548 GPHNQ9NQX3 736 aaPredicted RBP8.73□□□□□ -1.01
CPSF7-216ENST00000536548 SERTAD1Q9UHV2 236 aa8.73□□□□□ -1.01
CPSF7-216ENST00000536548 TRMT112Q9UI30 125 aaKnown RBP8.73□□□□□ -1.01
CPSF7-216ENST00000536548 MYO6Q9UM54 1294 aa8.73□□□□□ -1.01
CPSF7-216ENST00000536548 JRKLQ9Y4A0 524 aa8.73□□□□□ -1.01
CPSF7-216ENST00000536548 SRPRBQ9Y5M8 271 aaKnown RBP8.73□□□□□ -1.01
CPSF7-216ENST00000536548 SSC5DA1L4H1 1573 aa8.73□□□□□ -1.01
CPSF7-216ENST00000536548 CCDC196A0A1B0GTZ2 297 aa8.72□□□□□ -1.01
CPSF7-216ENST00000536548 TESPA1A2RU30 521 aaPredicted RBP8.72□□□□□ -1.01
CPSF7-216ENST00000536548 POLR2DO15514 142 aaKnown RBP8.72□□□□□ -1.01
CPSF7-216ENST00000536548 GPAA1O43292 621 aa8.72□□□□□ -1.01
CPSF7-216ENST00000536548 UFL1O94874 794 aa8.72□□□□□ -1.01
CPSF7-216ENST00000536548 MMP1P03956 469 aa8.72□□□□□ -1.01
CPSF7-216ENST00000536548 GJB1P08034 283 aa8.72□□□□□ -1.01
CPSF7-216ENST00000536548 RHOXF2BP0C7M4 288 aa8.72□□□□□ -1.01
CPSF7-216ENST00000536548 IFNAR1P17181 557 aa8.72□□□□□ -1.01
CPSF7-216ENST00000536548 XBP1P17861 261 aa8.72□□□□□ -1.01
CPSF7-216ENST00000536548 BMP6P22004 513 aa8.72□□□□□ -1.01
CPSF7-216ENST00000536548 HOXD11P31277 338 aaPredicted RBP8.72□□□□□ -1.01
CPSF7-216ENST00000536548 BMP8BP34820 402 aa8.72□□□□□ -1.01
CPSF7-216ENST00000536548 LIFRP42702 1097 aa8.72□□□□□ -1.01
CPSF7-216ENST00000536548 USP14P54578 494 aa8.72□□□□□ -1.01
CPSF7-216ENST00000536548 VSNL1P62760 191 aa8.72□□□□□ -1.01
CPSF7-216ENST00000536548 ARHGEF6Q15052 776 aa8.72□□□□□ -1.01
CPSF7-216ENST00000536548 TAF7LQ5H9L4 462 aa8.72□□□□□ -1.01
CPSF7-216ENST00000536548 TMEM67Q5HYA8 995 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms