RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 TXNRD1Q16881 649 aa17.97■□□□□ 0.47
CHMP1A-202ENST00000535997 NEK8Q86SG6 692 aa17.97■□□□□ 0.47
CHMP1A-202ENST00000535997 RETREG2Q8NC44 543 aa17.97■□□□□ 0.47
CHMP1A-202ENST00000535997 MSANTD4Q8NCY6 345 aa17.97■□□□□ 0.47
CHMP1A-202ENST00000535997 TRIM9Q9C026 710 aa17.97■□□□□ 0.47
CHMP1A-202ENST00000535997 HAUS4Q9H6D7 363 aa17.97■□□□□ 0.47
CHMP1A-202ENST00000535997 FLT1P17948 1338 aa17.97■□□□□ 0.47
CHMP1A-202ENST00000535997 TUBBP07437 444 aa17.97■□□□□ 0.47
CHMP1A-202ENST00000535997 SRGNP10124 158 aa17.97■□□□□ 0.47
CHMP1A-202ENST00000535997 PLCG1P19174 1290 aa17.97■□□□□ 0.47
CHMP1A-202ENST00000535997 CCNE1P24864 410 aa17.97■□□□□ 0.47
CHMP1A-202ENST00000535997 SMC1AQ14683 1233 aaKnown RBP17.97■□□□□ 0.47
CHMP1A-202ENST00000535997 LONRF2Q1L5Z9 754 aa17.97■□□□□ 0.47
CHMP1A-202ENST00000535997 LETM2Q2VYF4 491 aa17.97■□□□□ 0.47
CHMP1A-202ENST00000535997 CSGALNACT2Q8N6G5 542 aa17.97■□□□□ 0.47
CHMP1A-202ENST00000535997 TUBGCP2Q9BSJ2 902 aa17.97■□□□□ 0.47
CHMP1A-202ENST00000535997 ANKZF1Q9H8Y5 726 aa17.97■□□□□ 0.47
CHMP1A-202ENST00000535997 CD209Q9NNX6 404 aa17.97■□□□□ 0.47
CHMP1A-202ENST00000535997 SEC63Q9UGP8 760 aaKnown RBP17.97■□□□□ 0.47
CHMP1A-202ENST00000535997 BTDP43251 543 aa17.96■□□□□ 0.47
CHMP1A-202ENST00000535997 SOGA3Q5TF21 947 aa17.96■□□□□ 0.47
CHMP1A-202ENST00000535997 TAF3Q5VWG9 929 aa17.96■□□□□ 0.47
CHMP1A-202ENST00000535997 ZNF662Q6ZS27 426 aa17.96■□□□□ 0.47
CHMP1A-202ENST00000535997 FAM114A1Q8IWE2 563 aa17.96■□□□□ 0.47
CHMP1A-202ENST00000535997 CNBD1Q8NA66 436 aa17.96■□□□□ 0.47
CHMP1A-202ENST00000535997 LRRC15Q8TF66 581 aa17.96■□□□□ 0.47
CHMP1A-202ENST00000535997 FAM163AQ96GL9 167 aaPredicted RBP17.96■□□□□ 0.47
CHMP1A-202ENST00000535997 DUSP9Q99956 384 aaKnown RBP17.96■□□□□ 0.47
CHMP1A-202ENST00000535997 CTAGE15A4D2H0 777 aa17.96■□□□□ 0.47
CHMP1A-202ENST00000535997 PES1O00541 588 aaKnown RBP17.96■□□□□ 0.47
CHMP1A-202ENST00000535997 CTAGE8P0CG41 777 aa17.96■□□□□ 0.47
CHMP1A-202ENST00000535997 NOVP48745 357 aa17.96■□□□□ 0.47
CHMP1A-202ENST00000535997 CTAGE6Q86UF2 777 aa17.96■□□□□ 0.47
CHMP1A-202ENST00000535997 CTAGE4Q8IX94 777 aa17.96■□□□□ 0.47
CHMP1A-202ENST00000535997 P2RX5Q93086 422 aa17.96■□□□□ 0.47
CHMP1A-202ENST00000535997 NGLY1Q96IV0 654 aa17.96■□□□□ 0.47
CHMP1A-202ENST00000535997 EXOC1Q9NV70 894 aa17.96■□□□□ 0.47
CHMP1A-202ENST00000535997 REXO2Q9Y3B8 237 aaKnown RBP17.96■□□□□ 0.47
CHMP1A-202ENST00000535997 MAP2K7O14733 419 aa17.95■□□□□ 0.46
CHMP1A-202ENST00000535997 IL1R1P14778 569 aa17.95■□□□□ 0.46
CHMP1A-202ENST00000535997 KRT83P78385 493 aa17.95■□□□□ 0.46
CHMP1A-202ENST00000535997 PDE4DQ08499 809 aa17.95■□□□□ 0.46
CHMP1A-202ENST00000535997 COBLL1Q53SF7 1204 aa17.95■□□□□ 0.46
CHMP1A-202ENST00000535997 WDR59Q6PJI9 974 aa17.95■□□□□ 0.46
CHMP1A-202ENST00000535997 USP17L2Q6R6M4 530 aa17.95■□□□□ 0.46
CHMP1A-202ENST00000535997 SLF2Q8IX21 1173 aa17.95■□□□□ 0.46
CHMP1A-202ENST00000535997 TEX11Q8IYF3 940 aa17.95■□□□□ 0.46
CHMP1A-202ENST00000535997 MYO6Q9UM54 1294 aa17.95■□□□□ 0.46
CHMP1A-202ENST00000535997 NAV1Q8NEY1 1877 aa17.95■□□□□ 0.46
CHMP1A-202ENST00000535997 ESYT2A0FGR8 921 aa17.95■□□□□ 0.46
CHMP1A-202ENST00000535997 CYP2C19P33261 490 aa17.95■□□□□ 0.46
CHMP1A-202ENST00000535997 AMPD2Q01433 879 aa17.95■□□□□ 0.46
CHMP1A-202ENST00000535997 MEA1Q16626 185 aa17.95■□□□□ 0.46
CHMP1A-202ENST00000535997 SBF2Q86WG5 1849 aa17.94■□□□□ 0.46
CHMP1A-202ENST00000535997 PSMD14O00487 310 aa17.94■□□□□ 0.46
CHMP1A-202ENST00000535997 ERLIN1O75477 346 aa17.94■□□□□ 0.46
CHMP1A-202ENST00000535997 ATP2B4P23634 1241 aa17.94■□□□□ 0.46
CHMP1A-202ENST00000535997 TECP42680 631 aa17.94■□□□□ 0.46
CHMP1A-202ENST00000535997 GPSM2P81274 684 aa17.94■□□□□ 0.46
CHMP1A-202ENST00000535997 TBC1D8BQ0IIM8 1120 aa17.94■□□□□ 0.46
CHMP1A-202ENST00000535997 STK4Q13043 487 aa17.94■□□□□ 0.46
CHMP1A-202ENST00000535997 BEND6Q5SZJ8 279 aaPredicted RBP17.94■□□□□ 0.46
CHMP1A-202ENST00000535997 ANKRD40Q6AI12 368 aa17.94■□□□□ 0.46
CHMP1A-202ENST00000535997 CPVLQ9H3G5 476 aa17.94■□□□□ 0.46
CHMP1A-202ENST00000535997 BTAF1O14981 1849 aa17.94■□□□□ 0.46
CHMP1A-202ENST00000535997 TNRC6CQ9HCJ0 1690 aaKnown RBP17.93■□□□□ 0.46
CHMP1A-202ENST00000535997 CCDC66A2RUB6 948 aa17.93■□□□□ 0.46
CHMP1A-202ENST00000535997 hCG_1984214I3L0E3 225 aa17.93■□□□□ 0.46
CHMP1A-202ENST00000535997 TRIM21P19474 475 aaKnown RBP17.93■□□□□ 0.46
CHMP1A-202ENST00000535997 CNNM4Q6P4Q7 775 aa17.93■□□□□ 0.46
CHMP1A-202ENST00000535997 REXO1Q8N1G1 1221 aaKnown RBP17.93■□□□□ 0.46
CHMP1A-202ENST00000535997 MSL3Q8N5Y2 521 aaKnown RBP17.93■□□□□ 0.46
CHMP1A-202ENST00000535997 ZNF713Q8N859 430 aaPredicted RBP17.93■□□□□ 0.46
CHMP1A-202ENST00000535997 TBCKQ8TEA7 893 aa17.93■□□□□ 0.46
CHMP1A-202ENST00000535997 CEP95Q96GE4 821 aa17.93■□□□□ 0.46
CHMP1A-202ENST00000535997 CALML4Q96GE6 196 aa17.93■□□□□ 0.46
CHMP1A-202ENST00000535997 TTYH3Q9C0H2 523 aa17.93■□□□□ 0.46
CHMP1A-202ENST00000535997 ZNHIT6Q9NWK9 470 aaKnown RBP17.93■□□□□ 0.46
CHMP1A-202ENST00000535997 GUCA1BQ9UMX6 200 aa17.93■□□□□ 0.46
CHMP1A-202ENST00000535997 B4DLN1 442 aa17.93■□□□□ 0.46
CHMP1A-202ENST00000535997 ASIC1P78348 528 aa17.93■□□□□ 0.46
CHMP1A-202ENST00000535997 ZSCAN29Q8IWY8 852 aaPredicted RBP17.93■□□□□ 0.46
CHMP1A-202ENST00000535997 CCDC170Q8IYT3 715 aa17.93■□□□□ 0.46
CHMP1A-202ENST00000535997 RPGRQ92834 1020 aaKnown RBP17.93■□□□□ 0.46
CHMP1A-202ENST00000535997 RIOX1Q9H6W3 641 aa17.93■□□□□ 0.46
CHMP1A-202ENST00000535997 SNED1Q8TER0 1413 aa17.93■□□□□ 0.46
CHMP1A-202ENST00000535997 MYH1P12882 1939 aa17.93■□□□□ 0.46
CHMP1A-202ENST00000535997 POLR3GO15318 223 aaPredicted RBP17.92■□□□□ 0.46
CHMP1A-202ENST00000535997 RHBDL3P58872 404 aa17.92■□□□□ 0.46
CHMP1A-202ENST00000535997 ZBED6P86452 979 aa17.92■□□□□ 0.46
CHMP1A-202ENST00000535997 FIGNQ5HY92 759 aa17.92■□□□□ 0.46
CHMP1A-202ENST00000535997 SLC51AQ86UW1 340 aa17.92■□□□□ 0.46
CHMP1A-202ENST00000535997 EHBP1Q8NDI1 1231 aa17.92■□□□□ 0.46
CHMP1A-202ENST00000535997 CERKQ8TCT0 537 aa17.92■□□□□ 0.46
CHMP1A-202ENST00000535997 IQCDQ96DY2 449 aa17.92■□□□□ 0.46
CHMP1A-202ENST00000535997 C8orf37Q96NL8 207 aa17.92■□□□□ 0.46
CHMP1A-202ENST00000535997 GPR101Q96P66 508 aaPredicted RBP17.92■□□□□ 0.46
CHMP1A-202ENST00000535997 PIGSQ96S52 555 aa17.92■□□□□ 0.46
CHMP1A-202ENST00000535997 MMTAG2Q9BU76 263 aaKnown RBP17.92■□□□□ 0.46
CHMP1A-202ENST00000535997 VAT1LQ9HCJ6 419 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms